RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Nek5Q7TSC3 627 aa21.08■□□□□ 0.96
Trim71-201ENSMUST00000111816 Speer4f2E9Q366 295 aa21.07■□□□□ 0.96
Trim71-201ENSMUST00000111816 Rassf2Q8BMS9 326 aa21.07■□□□□ 0.96
Trim71-201ENSMUST00000111816 Cabp1Q9JLK7 227 aa21.07■□□□□ 0.96
Trim71-201ENSMUST00000111816 Fyb1O35601 819 aa21.07■□□□□ 0.96
Trim71-201ENSMUST00000111816 Fam13aQ8BGI4 693 aa21.07■□□□□ 0.96
Trim71-201ENSMUST00000111816 Hip1rQ9JKY5 1068 aa21.07■□□□□ 0.96
Trim71-201ENSMUST00000111816 Golga1Q9CW79 758 aa21.06■□□□□ 0.96
Trim71-201ENSMUST00000111816 Rufy3Q9D394 469 aa21.06■□□□□ 0.96
Trim71-201ENSMUST00000111816 Galntl5Q9D4M9 431 aa21.06■□□□□ 0.96
Trim71-201ENSMUST00000111816 WrnO09053 1401 aa21.06■□□□□ 0.96
Trim71-201ENSMUST00000111816 Bicd1Q8BR07 835 aa21.06■□□□□ 0.96
Trim71-201ENSMUST00000111816 Bms1Q6PGF5 1284 aaKnown RBP21.06■□□□□ 0.96
Trim71-201ENSMUST00000111816 PsapQ61207 557 aaKnown RBP21.06■□□□□ 0.96
Trim71-201ENSMUST00000111816 Gm136Q3V037 328 aa21.05■□□□□ 0.96
Trim71-201ENSMUST00000111816 Ssx2ipQ8VC66 615 aa21.05■□□□□ 0.96
Trim71-201ENSMUST00000111816 Fmn1Q05860 1466 aa21.05■□□□□ 0.96
Trim71-201ENSMUST00000111816 Ccnb3Q810T2 1396 aa21.05■□□□□ 0.96
Trim71-201ENSMUST00000111816 Prr16A3KMN5 304 aa21.05■□□□□ 0.96
Trim71-201ENSMUST00000111816 Atp6v1aP50516 617 aaKnown RBP21.05■□□□□ 0.96
Trim71-201ENSMUST00000111816 Stim2P83093 746 aa21.05■□□□□ 0.96
Trim71-201ENSMUST00000111816 Top1Q04750 767 aaKnown RBP21.05■□□□□ 0.96
Trim71-201ENSMUST00000111816 NinlQ6ZQ12 1394 aa21.05■□□□□ 0.96
Trim71-201ENSMUST00000111816 Ttll5Q8CHB8 1328 aa21.05■□□□□ 0.96
Trim71-201ENSMUST00000111816 Fam76aQ922G2 307 aa21.05■□□□□ 0.96
Trim71-201ENSMUST00000111816 Adcy5P84309 1262 aa21.05■□□□□ 0.96
Trim71-201ENSMUST00000111816 Cacna2d4Q5RJF7 1116 aa21.05■□□□□ 0.96
Trim71-201ENSMUST00000111816 Znf131Q8K3J5 619 aa21.05■□□□□ 0.96
Trim71-201ENSMUST00000111816 Smg7Q5RJH6 1138 aaKnown RBP21.05■□□□□ 0.96
Trim71-201ENSMUST00000111816 Gsto1O09131 240 aa21.04■□□□□ 0.96
Trim71-201ENSMUST00000111816 Neurog2P70447 263 aa21.04■□□□□ 0.96
Trim71-201ENSMUST00000111816 Smarcad1Q04692 1021 aa21.04■□□□□ 0.96
Trim71-201ENSMUST00000111816 Znf287Q9EQB9 759 aa21.04■□□□□ 0.96
Trim71-201ENSMUST00000111816 Nphp1Q9QY53 687 aa21.04■□□□□ 0.96
Trim71-201ENSMUST00000111816 Nfxl1E9Q8I7 918 aaKnown RBP21.04■□□□□ 0.96
Trim71-201ENSMUST00000111816 Sclt1G5E861 688 aa21.04■□□□□ 0.96
Trim71-201ENSMUST00000111816 Trim34bJ3QNR8 485 aa21.04■□□□□ 0.96
Trim71-201ENSMUST00000111816 Esx1O88933 382 aa21.04■□□□□ 0.96
Trim71-201ENSMUST00000111816 ImmtQ8CAQ8 757 aaKnown RBP21.04■□□□□ 0.96
Trim71-201ENSMUST00000111816 Brd3Q8K2F0 726 aaKnown RBP21.04■□□□□ 0.96
Trim71-201ENSMUST00000111816 Ankrd49Q8VE42 238 aa21.04■□□□□ 0.96
Trim71-201ENSMUST00000111816 Sytl4Q9R0Q1 673 aa21.04■□□□□ 0.96
Trim71-201ENSMUST00000111816 Mcm4P49717 862 aa21.04■□□□□ 0.96
Trim71-201ENSMUST00000111816 Tpx2A2APB8 745 aaKnown RBP21.03■□□□□ 0.96
Trim71-201ENSMUST00000111816 Zscan10Q3URR7 782 aa21.03■□□□□ 0.96
Trim71-201ENSMUST00000111816 Xab2Q9DCD2 855 aaKnown RBP21.03■□□□□ 0.96
Trim71-201ENSMUST00000111816 Cep19Q9CQA8 163 aa21.03■□□□□ 0.96
Trim71-201ENSMUST00000111816 Arl1P61211 181 aa21.03■□□□□ 0.96
Trim71-201ENSMUST00000111816 Arfgap2Q99K28 520 aa21.03■□□□□ 0.96
Trim71-201ENSMUST00000111816 Eftud2O08810 971 aaKnown RBP21.02■□□□□ 0.96
Trim71-201ENSMUST00000111816 SkiQ60698 725 aa21.02■□□□□ 0.96
Trim71-201ENSMUST00000111816 Ccdc12Q8R344 166 aaKnown RBP21.02■□□□□ 0.96
Trim71-201ENSMUST00000111816 Rbm33Q9CXK9 1231 aaKnown RBP21.02■□□□□ 0.96
Trim71-201ENSMUST00000111816 Golga5Q9QYE6 729 aa21.02■□□□□ 0.96
Trim71-201ENSMUST00000111816 Tmed1Q3V009 227 aa21.02■□□□□ 0.96
Trim71-201ENSMUST00000111816 Cep162Q6ZQ06 1403 aa21.02■□□□□ 0.96
Trim71-201ENSMUST00000111816 Rsph3bQ9DA80 389 aa21.02■□□□□ 0.96
Trim71-201ENSMUST00000111816 Golga4Q91VW5 2238 aa21.02■□□□□ 0.96
Trim71-201ENSMUST00000111816 Ccdc129Q14B48 1034 aa21.02■□□□□ 0.95
Trim71-201ENSMUST00000111816 Gtpbp10Q8K013 366 aa21.02■□□□□ 0.95
Trim71-201ENSMUST00000111816 Pms1Q8K119 917 aa21.02■□□□□ 0.95
Trim71-201ENSMUST00000111816 Atp2a2O55143 1044 aaKnown RBP21.01■□□□□ 0.95
Trim71-201ENSMUST00000111816 Gsdma2Q32M21 443 aa21.01■□□□□ 0.95
Trim71-201ENSMUST00000111816 ZwintQ9CQU5 252 aa21.01■□□□□ 0.95
Trim71-201ENSMUST00000111816 Znf394Q9Z1D9 521 aa21.01■□□□□ 0.95
Trim71-201ENSMUST00000111816 GmnnO88513 206 aa21.01■□□□□ 0.95
Trim71-201ENSMUST00000111816 Rnf216P58283 853 aa21.01■□□□□ 0.95
Trim71-201ENSMUST00000111816 Sdad1Q80UZ2 687 aaKnown RBP21.01■□□□□ 0.95
Trim71-201ENSMUST00000111816 Heatr4E9Q357 955 aa21.01■□□□□ 0.95
Trim71-201ENSMUST00000111816 Pole3Q9JKP7 145 aa21.01■□□□□ 0.95
Trim71-201ENSMUST00000111816 Gas2l3Q3UWW6 683 aa21.01■□□□□ 0.95
Trim71-201ENSMUST00000111816 Tuft1O08970 390 aa21■□□□□ 0.95
Trim71-201ENSMUST00000111816 Ripk4Q9ERK0 786 aa21■□□□□ 0.95
Trim71-201ENSMUST00000111816 Krt8P11679 490 aaKnown RBP21■□□□□ 0.95
Trim71-201ENSMUST00000111816 Fam177a1Q8BR63 207 aa21■□□□□ 0.95
Trim71-201ENSMUST00000111816 CebpzP53569 1052 aaKnown RBP21■□□□□ 0.95
Trim71-201ENSMUST00000111816 Nol8Q3UHX0 1147 aaKnown RBP21■□□□□ 0.95
Trim71-201ENSMUST00000111816 Spty2d1Q68FG3 682 aa21■□□□□ 0.95
Trim71-201ENSMUST00000111816 Vps18Q8R307 973 aa21■□□□□ 0.95
Trim71-201ENSMUST00000111816 Filip1Q9CS72 1211 aa21■□□□□ 0.95
Trim71-201ENSMUST00000111816 EnahQ03173 802 aa21■□□□□ 0.95
Trim71-201ENSMUST00000111816 Ankrd36D3Z4K0 1415 aa21■□□□□ 0.95
Trim71-201ENSMUST00000111816 Nuf2Q99P69 463 aa21■□□□□ 0.95
Trim71-201ENSMUST00000111816 Zpr1Q62384 459 aa20.99■□□□□ 0.95
Trim71-201ENSMUST00000111816 Gm28919A0A087WP35 240 aa20.99■□□□□ 0.95
Trim71-201ENSMUST00000111816 Pabpn1lQ5XFR0 273 aa20.99■□□□□ 0.95
Trim71-201ENSMUST00000111816 Tsga10Q6NY15 697 aa20.99■□□□□ 0.95
Trim71-201ENSMUST00000111816 Ttc12Q8BW49 704 aa20.99■□□□□ 0.95
Trim71-201ENSMUST00000111816 Prpf40aQ9R1C7 953 aaKnown RBP20.99■□□□□ 0.95
Trim71-201ENSMUST00000111816 Cfap65Q3V0B4 1847 aa20.99■□□□□ 0.95
Trim71-201ENSMUST00000111816 Nsrp1Q5NCR9 542 aa20.99■□□□□ 0.95
Trim71-201ENSMUST00000111816 Maco1Q7TQE6 664 aaKnown RBP20.99■□□□□ 0.95
Trim71-201ENSMUST00000111816 Homer2Q9QWW1 354 aa20.99■□□□□ 0.95
Trim71-201ENSMUST00000111816 Usp40Q8BWR4 1235 aa20.98■□□□□ 0.95
Trim71-201ENSMUST00000111816 Uchl5Q9WUP7 329 aa20.98■□□□□ 0.95
Trim71-201ENSMUST00000111816 Phldb1Q6PDH0 1371 aaKnown RBP20.98■□□□□ 0.95
Trim71-201ENSMUST00000111816 Nectin2P32507 530 aa20.98■□□□□ 0.95
Trim71-201ENSMUST00000111816 Ddx19aQ61655 478 aaKnown RBP20.98■□□□□ 0.95
Trim71-201ENSMUST00000111816 MlecQ6ZQI3 291 aaKnown RBP20.97■□□□□ 0.95
Trim71-201ENSMUST00000111816 Speer3W4VSP1 261 aa20.97■□□□□ 0.95
Retrieved 100 of 22,080 RNA–protein pairs in 37 ms