RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Lrrc43Q3V0L5 667 aa15.78■□□□□ 0.12
Trim50-202ENSMUST00000111180 DiexfQ8BTT6 772 aaKnown RBP15.78■□□□□ 0.12
Trim50-202ENSMUST00000111180 Spata31d1bE9QA57 1361 aa15.77■□□□□ 0.12
Trim50-202ENSMUST00000111180 Sned1Q70E20 1403 aa15.77■□□□□ 0.12
Trim50-202ENSMUST00000111180 Tiam2Q6ZPF3 1715 aa15.77■□□□□ 0.11
Trim50-202ENSMUST00000111180 Irx6Q9ER75 438 aa15.77■□□□□ 0.11
Trim50-202ENSMUST00000111180 AceP09470 1312 aa15.76■□□□□ 0.11
Trim50-202ENSMUST00000111180 Eif4a1P60843 406 aaKnown RBP15.76■□□□□ 0.11
Trim50-202ENSMUST00000111180 ArsiQ32KI9 573 aa15.76■□□□□ 0.11
Trim50-202ENSMUST00000111180 Chpf2Q3UU43 768 aa15.76■□□□□ 0.11
Trim50-202ENSMUST00000111180 Clcn1Q64347 994 aa15.76■□□□□ 0.11
Trim50-202ENSMUST00000111180 Amhr2Q8K592 568 aa15.76■□□□□ 0.11
Trim50-202ENSMUST00000111180 Chl1P70232 1209 aa15.75■□□□□ 0.11
Trim50-202ENSMUST00000111180 Cyp2c67Q569X9 491 aa15.75■□□□□ 0.11
Trim50-202ENSMUST00000111180 MarsQ68FL6 902 aaKnown RBP15.75■□□□□ 0.11
Trim50-202ENSMUST00000111180 Aldh1l1Q8R0Y6 902 aa15.75■□□□□ 0.11
Trim50-202ENSMUST00000111180 Senp3Q9EP97 568 aaKnown RBP15.75■□□□□ 0.11
Trim50-202ENSMUST00000111180 Cyp2c69E9PXC3 491 aa15.74■□□□□ 0.11
Trim50-202ENSMUST00000111180 Cyp2c40P56657 491 aa15.74■□□□□ 0.11
Trim50-202ENSMUST00000111180 1810065E05RikQ5NC41 235 aa15.74■□□□□ 0.11
Trim50-202ENSMUST00000111180 Tmco5bQ80X59 307 aa15.74■□□□□ 0.11
Trim50-202ENSMUST00000111180 Prkrip1Q9CWV6 186 aaKnown RBP15.74■□□□□ 0.11
Trim50-202ENSMUST00000111180 Slc34a2Q9DBP0 697 aa15.74■□□□□ 0.11
Trim50-202ENSMUST00000111180 Tgfb2P27090 414 aa15.73■□□□□ 0.11
Trim50-202ENSMUST00000111180 Pank1Q8K4K6 548 aa15.73■□□□□ 0.11
Trim50-202ENSMUST00000111180 HmcesQ8R1M0 353 aaKnown RBP15.73■□□□□ 0.11
Trim50-202ENSMUST00000111180 ScaperF8VQ70 1398 aaKnown RBP15.73■□□□□ 0.11
Trim50-202ENSMUST00000111180 Q3UPC7 1272 aa15.72■□□□□ 0.11
Trim50-202ENSMUST00000111180 Rapgefl1Q68EF8 662 aa15.72■□□□□ 0.11
Trim50-202ENSMUST00000111180 Slfnl1Q8BHW9 410 aa15.72■□□□□ 0.11
Trim50-202ENSMUST00000111180 SnrkQ8VDU5 748 aa15.72■□□□□ 0.11
Trim50-202ENSMUST00000111180 Znf521Q6KAS7 1311 aa15.72■□□□□ 0.11
Trim50-202ENSMUST00000111180 Col11a2Q64739 1736 aa15.72■□□□□ 0.11
Trim50-202ENSMUST00000111180 Wdhd1P59328 1117 aa15.71■□□□□ 0.11
Trim50-202ENSMUST00000111180 PsapQ61207 557 aaKnown RBP15.71■□□□□ 0.11
Trim50-202ENSMUST00000111180 Tmem119Q8R138 280 aa15.71■□□□□ 0.11
Trim50-202ENSMUST00000111180 Taf1dQ9D4V4 322 aa15.71■□□□□ 0.11
Trim50-202ENSMUST00000111180 Syde2E9PUP1 1314 aa15.71■□□□□ 0.11
Trim50-202ENSMUST00000111180 Ubr3Q5U430 1889 aa15.71■□□□□ 0.11
Trim50-202ENSMUST00000111180 Cnksr1A2A9K7 700 aa15.71■□□□□ 0.1
Trim50-202ENSMUST00000111180 Sv2bQ8BG39 683 aa15.71■□□□□ 0.1
Trim50-202ENSMUST00000111180 Srp68Q8BMA6 625 aaKnown RBP15.71■□□□□ 0.1
Trim50-202ENSMUST00000111180 Cyp2d12Q8BVD2 504 aa15.71■□□□□ 0.1
Trim50-202ENSMUST00000111180 Camkk2Q8C078 588 aa15.71■□□□□ 0.1
Trim50-202ENSMUST00000111180 TefQ9JLC6 301 aa15.71■□□□□ 0.1
Trim50-202ENSMUST00000111180 TrhQ62361 256 aa15.7■□□□□ 0.1
Trim50-202ENSMUST00000111180 Chmp4bQ9D8B3 224 aaKnown RBP15.7■□□□□ 0.1
Trim50-202ENSMUST00000111180 PigbQ9JJQ0 542 aa15.7■□□□□ 0.1
Trim50-202ENSMUST00000111180 Taf7Q9R1C0 341 aa15.7■□□□□ 0.1
Trim50-202ENSMUST00000111180 Cfap70D3YVL2 1141 aa15.69■□□□□ 0.1
Trim50-202ENSMUST00000111180 Tnnt1O88346 262 aa15.69■□□□□ 0.1
Trim50-202ENSMUST00000111180 Nectin2P32507 530 aa15.69■□□□□ 0.1
Trim50-202ENSMUST00000111180 Atp1b3P97370 278 aa15.69■□□□□ 0.1
Trim50-202ENSMUST00000111180 Morc2aQ69ZX6 1030 aa15.69■□□□□ 0.1
Trim50-202ENSMUST00000111180 Nsfl1cQ9CZ44 370 aaKnown RBP15.69■□□□□ 0.1
Trim50-202ENSMUST00000111180 Plch1Q4KWH5 1682 aa15.69■□□□□ 0.1
Trim50-202ENSMUST00000111180 C4bP01029 1738 aa15.69■□□□□ 0.1
Trim50-202ENSMUST00000111180 Rangap1P46061 589 aaKnown RBP15.68■□□□□ 0.1
Trim50-202ENSMUST00000111180 Strn4P58404 760 aa15.68■□□□□ 0.1
Trim50-202ENSMUST00000111180 Iqsec3Q3TES0 1195 aa15.68■□□□□ 0.1
Trim50-202ENSMUST00000111180 Rbm26Q6NZN0 1012 aaKnown RBP15.68■□□□□ 0.1
Trim50-202ENSMUST00000111180 Ric3Q8BPM6 367 aa15.68■□□□□ 0.1
Trim50-202ENSMUST00000111180 GckrQ91X44 587 aa15.68■□□□□ 0.1
Trim50-202ENSMUST00000111180 Nip7Q9CXK8 180 aaKnown RBP15.68■□□□□ 0.1
Trim50-202ENSMUST00000111180 Ric1Q69ZJ7 1422 aa15.68■□□□□ 0.1
Trim50-202ENSMUST00000111180 Csrnp3P59055 597 aa15.67■□□□□ 0.1
Trim50-202ENSMUST00000111180 Cers3Q1A3B0 383 aa15.67■□□□□ 0.1
Trim50-202ENSMUST00000111180 Maco1Q7TQE6 664 aaKnown RBP15.67■□□□□ 0.1
Trim50-202ENSMUST00000111180 FktnQ8R507 461 aa15.67■□□□□ 0.1
Trim50-202ENSMUST00000111180 Zbtb1Q91VL9 713 aa15.67■□□□□ 0.1
Trim50-202ENSMUST00000111180 Nav1Q8CH77 1875 aa15.67■□□□□ 0.1
Trim50-202ENSMUST00000111180 Adcy9P51830 1353 aa15.66■□□□□ 0.1
Trim50-202ENSMUST00000111180 Cnnm1Q0GA42 951 aa15.65■□□□□ 0.1
Trim50-202ENSMUST00000111180 CoilQ5SU73 570 aa15.65■□□□□ 0.1
Trim50-202ENSMUST00000111180 Spon1Q8VCC9 807 aa15.65■□□□□ 0.1
Trim50-202ENSMUST00000111180 Znf330Q922H9 316 aa15.65■□□□□ 0.1
Trim50-202ENSMUST00000111180 MvpQ9EQK5 861 aa15.65■□□□□ 0.1
Trim50-202ENSMUST00000111180 Fkbp4P30416 458 aa15.65■□□□□ 0.1
Trim50-202ENSMUST00000111180 Flad1Q8R123 492 aa15.65■□□□□ 0.1
Trim50-202ENSMUST00000111180 Trip6Q9Z1Y4 480 aa15.65■□□□□ 0.1
Trim50-202ENSMUST00000111180 Gm12185Q5NCB2 835 aa15.64■□□□□ 0.09
Trim50-202ENSMUST00000111180 Fam83gQ5SWY7 812 aa15.64■□□□□ 0.09
Trim50-202ENSMUST00000111180 Tspyl2Q7TQI8 677 aa15.64■□□□□ 0.09
Trim50-202ENSMUST00000111180 Tktl2Q9D4D4 627 aa15.64■□□□□ 0.09
Trim50-202ENSMUST00000111180 Rapgef4Q9EQZ6 1011 aa15.64■□□□□ 0.09
Trim50-202ENSMUST00000111180 Zfyve9A2A8R0 1397 aa15.63■□□□□ 0.09
Trim50-202ENSMUST00000111180 Slurp2P0DP59 97 aa15.63■□□□□ 0.09
Trim50-202ENSMUST00000111180 Flt4P35917 1363 aa15.62■□□□□ 0.09
Trim50-202ENSMUST00000111180 Erbb4Q61527 1308 aa15.62■□□□□ 0.09
Trim50-202ENSMUST00000111180 Ankrd44B2RXR6 993 aa15.62■□□□□ 0.09
Trim50-202ENSMUST00000111180 B4galnt4Q766D5 1034 aa15.62■□□□□ 0.09
Trim50-202ENSMUST00000111180 Mylk2Q8VCR8 613 aa15.62■□□□□ 0.09
Trim50-202ENSMUST00000111180 Echdc1Q9D9V3 322 aa15.62■□□□□ 0.09
Trim50-202ENSMUST00000111180 Kndc1Q0KK55 1742 aa15.61■□□□□ 0.09
Trim50-202ENSMUST00000111180 Cyp2c68K7N6C2 491 aa15.61■□□□□ 0.09
Trim50-202ENSMUST00000111180 SympkQ80X82 1284 aa15.61■□□□□ 0.09
Trim50-202ENSMUST00000111180 IarsQ8BU30 1262 aa15.61■□□□□ 0.09
Trim50-202ENSMUST00000111180 Aldh1l2Q8K009 923 aa15.61■□□□□ 0.09
Trim50-202ENSMUST00000111180 Fam122aQ9DB52 284 aa15.61■□□□□ 0.09
Trim50-202ENSMUST00000111180 Pde3aQ9Z0X4 1141 aa15.61■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms