RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Pa2g4P50580 394 aaKnown RBP13.89□□□□□ -0.19
Vps54-202ENSMUST00000109578 Gjb2Q00977 226 aa13.89□□□□□ -0.19
Vps54-202ENSMUST00000109578 EappQ5BU09 281 aa13.89□□□□□ -0.19
Vps54-202ENSMUST00000109578 Tgfb1i1Q62219 461 aa13.89□□□□□ -0.19
Vps54-202ENSMUST00000109578 Brf1Q8CFK2 676 aa13.89□□□□□ -0.19
Vps54-202ENSMUST00000109578 Ahnak2E9PYB0 1738 aaKnown RBP13.89□□□□□ -0.19
Vps54-202ENSMUST00000109578 Myo5bP21271 1818 aa13.89□□□□□ -0.19
Vps54-202ENSMUST00000109578 Eif4a1P60843 406 aaKnown RBP13.89□□□□□ -0.19
Vps54-202ENSMUST00000109578 VgfQ0VGU4 617 aa13.89□□□□□ -0.19
Vps54-202ENSMUST00000109578 Bms1Q6PGF5 1284 aaKnown RBP13.89□□□□□ -0.19
Vps54-202ENSMUST00000109578 Brpf1B2RRD7 1212 aa13.88□□□□□ -0.19
Vps54-202ENSMUST00000109578 Bend3Q6PAL0 825 aa13.88□□□□□ -0.19
Vps54-202ENSMUST00000109578 Ush1cQ9ES64 910 aa13.88□□□□□ -0.19
Vps54-202ENSMUST00000109578 Smarce1O54941 411 aaKnown RBP13.87□□□□□ -0.19
Vps54-202ENSMUST00000109578 Kdm4aQ8BW72 1064 aa13.87□□□□□ -0.19
Vps54-202ENSMUST00000109578 Rufy3Q9D394 469 aa13.87□□□□□ -0.19
Vps54-202ENSMUST00000109578 Ccdc7Q9D541 371 aa13.87□□□□□ -0.19
Vps54-202ENSMUST00000109578 Cnksr1A2A9K7 700 aa13.87□□□□□ -0.19
Vps54-202ENSMUST00000109578 Ripk4Q9ERK0 786 aa13.87□□□□□ -0.19
Vps54-202ENSMUST00000109578 Mknk2Q8CDB0 459 aa13.87□□□□□ -0.19
Vps54-202ENSMUST00000109578 Noc3lQ8VI84 807 aaKnown RBP13.87□□□□□ -0.19
Vps54-202ENSMUST00000109578 Rad50P70388 1312 aa13.87□□□□□ -0.19
Vps54-202ENSMUST00000109578 Pcmtd1P59913 357 aa13.87□□□□□ -0.19
Vps54-202ENSMUST00000109578 Gsdma3Q5Y4Y6 464 aa13.87□□□□□ -0.19
Vps54-202ENSMUST00000109578 Ints3Q7TPD0 1041 aaKnown RBP13.87□□□□□ -0.19
Vps54-202ENSMUST00000109578 Edc3Q8K2D3 508 aaKnown RBP13.87□□□□□ -0.19
Vps54-202ENSMUST00000109578 Gzf1Q4VBD9 706 aa13.86□□□□□ -0.19
Vps54-202ENSMUST00000109578 Pnma3Q8JZW8 466 aa13.86□□□□□ -0.19
Vps54-202ENSMUST00000109578 Tceal9Q9DD24 104 aa13.86□□□□□ -0.19
Vps54-202ENSMUST00000109578 Zfp804bA0A0G2JGH6 1343 aa13.86□□□□□ -0.19
Vps54-202ENSMUST00000109578 Olfml1Q8BSH2 233 aa13.86□□□□□ -0.19
Vps54-202ENSMUST00000109578 Trpm3Q5F4S9 1721 aa13.86□□□□□ -0.19
Vps54-202ENSMUST00000109578 Strn4P58404 760 aa13.86□□□□□ -0.19
Vps54-202ENSMUST00000109578 DpydQ8CHR6 1025 aa13.86□□□□□ -0.19
Vps54-202ENSMUST00000109578 Ccar2Q8VDP4 922 aaKnown RBP13.86□□□□□ -0.19
Vps54-202ENSMUST00000109578 PtprvP70289 1705 aa13.85□□□□□ -0.19
Vps54-202ENSMUST00000109578 Btbd11Q6GQW0 1109 aa13.85□□□□□ -0.19
Vps54-202ENSMUST00000109578 TatQ8QZR1 454 aa13.85□□□□□ -0.19
Vps54-202ENSMUST00000109578 Samm50Q8BGH2 469 aa13.85□□□□□ -0.19
Vps54-202ENSMUST00000109578 Zbtb22Q9Z0G7 638 aa13.85□□□□□ -0.19
Vps54-202ENSMUST00000109578 Becn1O88597 448 aa13.84□□□□□ -0.19
Vps54-202ENSMUST00000109578 Cct4P80315 539 aaKnown RBP13.84□□□□□ -0.19
Vps54-202ENSMUST00000109578 Ddx19aQ61655 478 aaKnown RBP13.84□□□□□ -0.19
Vps54-202ENSMUST00000109578 Glipr1l2Q9CQ35 332 aa13.84□□□□□ -0.19
Vps54-202ENSMUST00000109578 Echdc1Q9D9V3 322 aa13.84□□□□□ -0.19
Vps54-202ENSMUST00000109578 Map3k2Q61083 619 aa13.84□□□□□ -0.19
Vps54-202ENSMUST00000109578 Jarid2Q62315 1234 aa13.84□□□□□ -0.19
Vps54-202ENSMUST00000109578 Ptpn23Q6PB44 1692 aa13.84□□□□□ -0.19
Vps54-202ENSMUST00000109578 Tpm2P58774 284 aa13.84□□□□□ -0.19
Vps54-202ENSMUST00000109578 Usp48Q3V0C5 1052 aa13.84□□□□□ -0.19
Vps54-202ENSMUST00000109578 Cdca7lQ922M5 438 aa13.84□□□□□ -0.19
Vps54-202ENSMUST00000109578 Amotl1Q9D4H4 968 aa13.84□□□□□ -0.19
Vps54-202ENSMUST00000109578 Adcy9P51830 1353 aa13.83□□□□□ -0.19
Vps54-202ENSMUST00000109578 Top1mtQ8R4U6 593 aa13.83□□□□□ -0.2
Vps54-202ENSMUST00000109578 Stx6Q9JKK1 255 aa13.83□□□□□ -0.2
Vps54-202ENSMUST00000109578 Syt1P46096 421 aa13.83□□□□□ -0.2
Vps54-202ENSMUST00000109578 Bach1P97302 739 aa13.83□□□□□ -0.2
Vps54-202ENSMUST00000109578 Fam228bQ497Q6 232 aa13.83□□□□□ -0.2
Vps54-202ENSMUST00000109578 Smc3Q9CW03 1217 aaKnown RBP13.83□□□□□ -0.2
Vps54-202ENSMUST00000109578 Casc1Q6TDU8 730 aa13.82□□□□□ -0.2
Vps54-202ENSMUST00000109578 Tceanc2Q8R2M0 207 aa13.82□□□□□ -0.2
Vps54-202ENSMUST00000109578 Dnajc10Q9DC23 793 aa13.82□□□□□ -0.2
Vps54-202ENSMUST00000109578 Scn7aB1AYL1 1681 aa13.82□□□□□ -0.2
Vps54-202ENSMUST00000109578 Ets1P27577 440 aa13.82□□□□□ -0.2
Vps54-202ENSMUST00000109578 Tti2Q8BGV4 512 aa13.82□□□□□ -0.2
Vps54-202ENSMUST00000109578 Arfgef2A2A5R2 1792 aa13.82□□□□□ -0.2
Vps54-202ENSMUST00000109578 Mcm3P25206 812 aaKnown RBP13.82□□□□□ -0.2
Vps54-202ENSMUST00000109578 Pdcl2Q78Y63 240 aa13.82□□□□□ -0.2
Vps54-202ENSMUST00000109578 Ccdc155Q80VJ8 648 aa13.82□□□□□ -0.2
Vps54-202ENSMUST00000109578 D430041D05RikF6ZGR6 1678 aa13.82□□□□□ -0.2
Vps54-202ENSMUST00000109578 Add2Q9QYB8 725 aa13.81□□□□□ -0.2
Vps54-202ENSMUST00000109578 Ifit2Q64112 472 aa13.81□□□□□ -0.2
Vps54-202ENSMUST00000109578 Taf5lQ91WQ5 589 aa13.81□□□□□ -0.2
Vps54-202ENSMUST00000109578 Mad1l1Q9WTX8 717 aaKnown RBP13.81□□□□□ -0.2
Vps54-202ENSMUST00000109578 Ano8Q6PB70 1060 aa13.81□□□□□ -0.2
Vps54-202ENSMUST00000109578 Ppfia1B2RXQ2 1266 aa13.81□□□□□ -0.2
Vps54-202ENSMUST00000109578 Il1rapl2Q9ERS6 686 aa13.81□□□□□ -0.2
Vps54-202ENSMUST00000109578 Mindy4Q3UQI9 744 aa13.8□□□□□ -0.2
Vps54-202ENSMUST00000109578 Zbtb3Q91X45 518 aa13.8□□□□□ -0.2
Vps54-202ENSMUST00000109578 Atg3Q9CPX6 314 aa13.8□□□□□ -0.2
Vps54-202ENSMUST00000109578 C5P06684 1680 aa13.8□□□□□ -0.2
Vps54-202ENSMUST00000109578 Mon2Q80TL7 1715 aa13.8□□□□□ -0.2
Vps54-202ENSMUST00000109578 Pkp1P97350 728 aaKnown RBP13.8□□□□□ -0.2
Vps54-202ENSMUST00000109578 Wdr93Q402B2 695 aa13.8□□□□□ -0.2
Vps54-202ENSMUST00000109578 Tsr2Q8C8T8 191 aa13.8□□□□□ -0.2
Vps54-202ENSMUST00000109578 Mrpl50Q8VDT9 159 aaKnown RBP13.8□□□□□ -0.2
Vps54-202ENSMUST00000109578 Arap3Q8R5G7 1538 aa13.79□□□□□ -0.2
Vps54-202ENSMUST00000109578 Als2Q920R0 1651 aa13.79□□□□□ -0.2
Vps54-202ENSMUST00000109578 4930504O13RikQ8C5Z9 145 aa13.79□□□□□ -0.2
Vps54-202ENSMUST00000109578 GckrQ91X44 587 aa13.79□□□□□ -0.2
Vps54-202ENSMUST00000109578 Col1a2Q01149 1372 aa13.79□□□□□ -0.2
Vps54-202ENSMUST00000109578 Cd22P35329 862 aa13.78□□□□□ -0.2
Vps54-202ENSMUST00000109578 Ccdc178Q8CDV0 866 aa13.78□□□□□ -0.2
Vps54-202ENSMUST00000109578 Q9D9S1 216 aa13.78□□□□□ -0.2
Vps54-202ENSMUST00000109578 Igfbp6P47880 238 aa13.78□□□□□ -0.2
Vps54-202ENSMUST00000109578 Adamtsl3G3UXC7 1706 aa13.78□□□□□ -0.2
Vps54-202ENSMUST00000109578 Bicc1Q99MQ1 977 aaKnown RBP13.78□□□□□ -0.2
Vps54-202ENSMUST00000109578 Nup153E9Q3G8 1462 aaKnown RBP13.78□□□□□ -0.2
Vps54-202ENSMUST00000109578 Hspa2P17156 633 aa13.78□□□□□ -0.2
Vps54-202ENSMUST00000109578 Gse1Q3U3C9 1213 aa13.78□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms