RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Ppp1r9bQ6R891 817 aaKnown RBP12.09□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Samm50Q8BGH2 469 aa12.09□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Brd3Q8K2F0 726 aaKnown RBP12.09□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Pola1P33609 1465 aa12.09□□□□□ -0.47
Scn8a-201ENSMUST00000082209 SphkapQ6NSW3 1687 aa12.09□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Cfap69Q8BH53 942 aa12.09□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Map2k1P31938 393 aa12.09□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Cavin2Q63918 418 aaKnown RBP12.09□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Pde4bB1AWC9 736 aa12.09□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Speer4bQ9D9F7 267 aa12.09□□□□□ -0.47
Scn8a-201ENSMUST00000082209 IkQ9Z1M8 557 aaKnown RBP12.09□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Jade2Q6ZQF7 829 aa12.09□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Uchl5Q9WUP7 329 aa12.09□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Ppm1fQ8CGA0 452 aa12.08□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Skint5A7XUY5 1461 aa12.08□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Gm18336A0A140LIU8 765 aa12.08□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Ttc19Q8CC21 365 aa12.08□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Nphp3Q7TNH6 1325 aa12.08□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Akap2O54931 893 aa12.08□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Cdan1Q8CC12 1239 aa12.08□□□□□ -0.48
Scn8a-201ENSMUST00000082209 PtprgQ05909 1442 aa12.08□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Acbd3Q8BMP6 525 aa12.08□□□□□ -0.48
Scn8a-201ENSMUST00000082209 NapbP28663 298 aa12.08□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Vps37dQ810I0 261 aa12.08□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Kdm5bQ80Y84 1544 aa12.08□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Adgrl2Q8JZZ7 1487 aa12.07□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Erich4Q3UNU4 136 aa12.07□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Cep152A2AUM9 1736 aaKnown RBP12.07□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Rbm5Q91YE7 815 aaKnown RBP12.07□□□□□ -0.48
Scn8a-201ENSMUST00000082209 4931400O07RikQ9D4M5 137 aa12.07□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Smc1aQ9CU62 1233 aaKnown RBP12.07□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Gjb2Q00977 226 aa12.07□□□□□ -0.48
Scn8a-201ENSMUST00000082209 LlphQ9D945 130 aaKnown RBP12.07□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Stx6Q9JKK1 255 aa12.07□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Uri1Q3TLD5 531 aa12.06□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Plekhm2Q80TQ5 1018 aa12.06□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Bag3Q9JLV1 577 aaKnown RBP12.06□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Fam107bQ3TGF2 131 aa12.06□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Paxip1Q6NZQ4 1056 aa12.06□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Ttc5Q99LG4 440 aa12.06□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Ccdc42Q5SV66 316 aa12.06□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Idi2Q8BFZ6 227 aa12.06□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Mrps27Q8BK72 415 aaKnown RBP12.06□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Tmem266Q8BZB3 538 aa12.06□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Map7d1A2AJI0 846 aa12.06□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Ccdc121E9Q6D3 323 aa12.06□□□□□ -0.48
Scn8a-201ENSMUST00000082209 GmnnO88513 206 aa12.06□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Stmn4P63042 189 aa12.06□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Shtn1Q8K2Q9 631 aa12.06□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Rbm10Q99KG3 930 aaKnown RBP12.05□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Fbf1A2A870 1173 aa12.05□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Exoc6bA6H5Z3 810 aa12.05□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Prkar2bP31324 416 aa12.05□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Bcl2l13P59017 434 aa12.05□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Usp37Q8C0R0 979 aa12.05□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Slc26a8Q8R0C3 999 aa12.05□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Scaf1Q5U4C3 1256 aaKnown RBP12.05□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Kdm5cP41230 1554 aa12.05□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Lrrc9Q8CDN9 1456 aa12.05□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Kif14L0N7N1 1674 aaKnown RBP12.05□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Pip4k2bQ80XI4 416 aa12.05□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Mrpl44Q9CY73 333 aaKnown RBP12.05□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Naip6Q9JIB6 1403 aa12.05□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Prex2Q3LAC4 1598 aa12.05□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Terf2O35144 541 aa12.05□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Zfp853A0A1D5RM95 733 aa12.04□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Fermt1P59113 677 aa12.04□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Cnnm2Q3TWN3 875 aa12.04□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Aldh8a1Q8BH00 487 aa12.04□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Eif4g3Q80XI3 1579 aaKnown RBP12.04□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Zkscan7E9PVW1 718 aa12.04□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Ddx10Q80Y44 875 aaKnown RBP12.04□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Pof1bQ8K4L4 587 aa12.04□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Kdm3bQ6ZPY7 1562 aa12.04□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Prm3Q62100 101 aa12.04□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Ano10Q8BH79 659 aa12.04□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Ccdc73Q8CDM4 1066 aa12.04□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Ccdc158Q8CDI6 1109 aa12.04□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Ankib1Q6ZPS6 1085 aa12.04□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Txndc16Q7TN22 820 aa12.04□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Bag4Q8CI61 457 aa12.04□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Tmc2Q8R4P4 888 aa12.04□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Gpatch8A2A6A1 1505 aa12.04□□□□□ -0.48
Scn8a-201ENSMUST00000082209 AnkarA2RT91 1465 aa12.04□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Nol11Q8BJW5 723 aaKnown RBP12.04□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Tagap1P0CAX8 505 aa12.04□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Gbp1Q01514 589 aa12.04□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Fgfr1opQ66JX5 399 aa12.04□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Ccar2Q8VDP4 922 aaKnown RBP12.04□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Ppp1r42Q8R1Z4 357 aa12.04□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Kif2aP28740 705 aa12.03□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Ccdc93Q7TQK5 629 aa12.03□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Wdr7Q920I9 1489 aa12.03□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Tbc1d2bQ3U0J8 965 aa12.03□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Bbof1Q3V079 533 aa12.03□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Gnat3Q3V3I2 354 aa12.03□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Atp8b3Q6UQ17 1335 aa12.03□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Snw1Q9CSN1 536 aaKnown RBP12.03□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Uggt2E9Q4X2 1504 aa12.03□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Tfip11Q9ERA6 838 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 105.1 ms