RNA–Protein interactions for RNA: ENSMUST00000063905.11

Clip1-202, Transcript of CAP-Gly domain-containing linker protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Clip1, Length 4,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1-202ENSMUST00000063905 Pdcl3Q8BVF2 240 aa13.57□□□□□ -0.24
Clip1-202ENSMUST00000063905 Efcab2Q9CQ46 164 aa13.57□□□□□ -0.24
Clip1-202ENSMUST00000063905 FanclQ9CR14 375 aa13.57□□□□□ -0.24
Clip1-202ENSMUST00000063905 Map3k2Q61083 619 aa13.56□□□□□ -0.24
Clip1-202ENSMUST00000063905 Znf526Q8BI66 675 aa13.56□□□□□ -0.24
Clip1-202ENSMUST00000063905 Lrrc59Q922Q8 307 aaKnown RBP13.56□□□□□ -0.24
Clip1-202ENSMUST00000063905 Iqsec3Q3TES0 1195 aa13.56□□□□□ -0.24
Clip1-202ENSMUST00000063905 Smarca5Q91ZW3 1051 aaKnown RBP13.56□□□□□ -0.24
Clip1-202ENSMUST00000063905 Ppp1r42Q8R1Z4 357 aa13.56□□□□□ -0.24
Clip1-202ENSMUST00000063905 Gtf3c5Q8R2T8 520 aa13.56□□□□□ -0.24
Clip1-202ENSMUST00000063905 Cwc27Q3TKY6 469 aa13.55□□□□□ -0.24
Clip1-202ENSMUST00000063905 Slc39a6Q8C145 765 aa13.55□□□□□ -0.24
Clip1-202ENSMUST00000063905 Bcl2l12Q9D3J3 255 aa13.55□□□□□ -0.24
Clip1-202ENSMUST00000063905 Irf9Q61179 399 aa13.55□□□□□ -0.24
Clip1-202ENSMUST00000063905 Pdia6Q922R8 440 aaKnown RBP13.55□□□□□ -0.24
Clip1-202ENSMUST00000063905 Cgnl1Q6AW69 1298 aa13.55□□□□□ -0.24
Clip1-202ENSMUST00000063905 Bend3Q6PAL0 825 aa13.54□□□□□ -0.24
Clip1-202ENSMUST00000063905 Zfp142G5E869 1843 aa13.54□□□□□ -0.24
Clip1-202ENSMUST00000063905 Mfap1aC0HKD8 439 aaKnown RBP13.53□□□□□ -0.24
Clip1-202ENSMUST00000063905 Mfap1bC0HKD9 439 aaKnown RBP13.53□□□□□ -0.24
Clip1-202ENSMUST00000063905 VgfQ0VGU4 617 aa13.53□□□□□ -0.24
Clip1-202ENSMUST00000063905 Elp1Q7TT37 1333 aaKnown RBP13.53□□□□□ -0.24
Clip1-202ENSMUST00000063905 Hspa1lP16627 641 aa13.53□□□□□ -0.24
Clip1-202ENSMUST00000063905 Ipo4Q8VI75 1082 aa13.53□□□□□ -0.24
Clip1-202ENSMUST00000063905 ApobrQ8VBT6 942 aa13.53□□□□□ -0.24
Clip1-202ENSMUST00000063905 Nphp1Q9QY53 687 aa13.53□□□□□ -0.24
Clip1-202ENSMUST00000063905 Ccnl1Q52KE7 532 aaKnown RBP13.52□□□□□ -0.24
Clip1-202ENSMUST00000063905 Ints5Q8CHT3 1018 aa13.52□□□□□ -0.24
Clip1-202ENSMUST00000063905 Adcy9P51830 1353 aa13.52□□□□□ -0.24
Clip1-202ENSMUST00000063905 Flad1Q8R123 492 aa13.52□□□□□ -0.24
Clip1-202ENSMUST00000063905 Slc4a10Q5DTL9 1118 aa13.52□□□□□ -0.25
Clip1-202ENSMUST00000063905 Aldh8a1Q8BH00 487 aa13.52□□□□□ -0.25
Clip1-202ENSMUST00000063905 Stk36Q69ZM6 1316 aa13.52□□□□□ -0.25
Clip1-202ENSMUST00000063905 FocadA2AKG8 1798 aa13.52□□□□□ -0.25
Clip1-202ENSMUST00000063905 Wdr63B2RY71 923 aa13.52□□□□□ -0.25
Clip1-202ENSMUST00000063905 Atp8b2P98199 1209 aa13.52□□□□□ -0.25
Clip1-202ENSMUST00000063905 Bicc1Q99MQ1 977 aaKnown RBP13.52□□□□□ -0.25
Clip1-202ENSMUST00000063905 Gcc1Q9D4H2 778 aa13.52□□□□□ -0.25
Clip1-202ENSMUST00000063905 Dlg5E9Q9R9 1921 aa13.52□□□□□ -0.25
Clip1-202ENSMUST00000063905 Ttll7A4Q9F0 912 aa13.51□□□□□ -0.25
Clip1-202ENSMUST00000063905 Atg3Q9CPX6 314 aa13.51□□□□□ -0.25
Clip1-202ENSMUST00000063905 Igfbp6P47880 238 aa13.51□□□□□ -0.25
Clip1-202ENSMUST00000063905 Slc5a4bQ91ZP4 660 aa13.51□□□□□ -0.25
Clip1-202ENSMUST00000063905 Myo5bP21271 1818 aa13.51□□□□□ -0.25
Clip1-202ENSMUST00000063905 Eif2s2Q99L45 331 aaKnown RBP13.51□□□□□ -0.25
Clip1-202ENSMUST00000063905 Psrc1Q9D0P7 329 aa13.5□□□□□ -0.25
Clip1-202ENSMUST00000063905 Tnks1bp1P58871 1720 aa13.5□□□□□ -0.25
Clip1-202ENSMUST00000063905 AceP09470 1312 aa13.49□□□□□ -0.25
Clip1-202ENSMUST00000063905 Hspa2P17156 633 aa13.49□□□□□ -0.25
Clip1-202ENSMUST00000063905 Atg4a-psA0A0G2JFS9 396 aa13.49□□□□□ -0.25
Clip1-202ENSMUST00000063905 Tlr7P58681 1050 aa13.49□□□□□ -0.25
Clip1-202ENSMUST00000063905 Atg4aQ8C9S8 396 aa13.49□□□□□ -0.25
Clip1-202ENSMUST00000063905 Flt4P35917 1363 aa13.49□□□□□ -0.25
Clip1-202ENSMUST00000063905 Smg7Q5RJH6 1138 aaKnown RBP13.49□□□□□ -0.25
Clip1-202ENSMUST00000063905 Cyp46a1Q9WVK8 500 aa13.49□□□□□ -0.25
Clip1-202ENSMUST00000063905 Nek4Q9Z1J2 792 aa13.49□□□□□ -0.25
Clip1-202ENSMUST00000063905 Exoc5Q3TPX4 708 aa13.48□□□□□ -0.25
Clip1-202ENSMUST00000063905 Mmp8O70138 465 aa13.48□□□□□ -0.25
Clip1-202ENSMUST00000063905 Mcm2P97310 904 aa13.48□□□□□ -0.25
Clip1-202ENSMUST00000063905 IbspQ61711 324 aa13.48□□□□□ -0.25
Clip1-202ENSMUST00000063905 Tceal9Q9DD24 104 aa13.48□□□□□ -0.25
Clip1-202ENSMUST00000063905 Ier5O89113 308 aa13.48□□□□□ -0.25
Clip1-202ENSMUST00000063905 Lmbr1lQ9D1E5 489 aa13.48□□□□□ -0.25
Clip1-202ENSMUST00000063905 Sik1Q60670 779 aa13.47□□□□□ -0.25
Clip1-202ENSMUST00000063905 Clcn1Q64347 994 aa13.47□□□□□ -0.25
Clip1-202ENSMUST00000063905 Sf3b2Q3UJB0 878 aaKnown RBP13.47□□□□□ -0.25
Clip1-202ENSMUST00000063905 Kcnh4A2A5F7 1018 aa13.47□□□□□ -0.25
Clip1-202ENSMUST00000063905 Morc2aQ69ZX6 1030 aa13.47□□□□□ -0.25
Clip1-202ENSMUST00000063905 PtmsQ9D0J8 101 aaKnown RBP13.47□□□□□ -0.25
Clip1-202ENSMUST00000063905 Ccdc129Q14B48 1034 aa13.46□□□□□ -0.25
Clip1-202ENSMUST00000063905 Becn1O88597 448 aa13.46□□□□□ -0.25
Clip1-202ENSMUST00000063905 HellsQ60848 821 aa13.46□□□□□ -0.25
Clip1-202ENSMUST00000063905 Cap2Q9CYT6 476 aa13.46□□□□□ -0.25
Clip1-202ENSMUST00000063905 Eif3aP23116 1344 aaKnown RBP13.46□□□□□ -0.25
Clip1-202ENSMUST00000063905 ScaperF8VQ70 1398 aaKnown RBP13.46□□□□□ -0.25
Clip1-202ENSMUST00000063905 Grm8P47743 908 aa13.46□□□□□ -0.26
Clip1-202ENSMUST00000063905 Ankle2Q6P1H6 964 aa13.46□□□□□ -0.26
Clip1-202ENSMUST00000063905 Eno4Q8C042 619 aa13.45□□□□□ -0.26
Clip1-202ENSMUST00000063905 Fbxo2Q80UW2 297 aa13.45□□□□□ -0.26
Clip1-202ENSMUST00000063905 Ginm1Q91WR6 327 aa13.45□□□□□ -0.26
Clip1-202ENSMUST00000063905 Mcmdc2E9Q956 681 aa13.45□□□□□ -0.26
Clip1-202ENSMUST00000063905 Nkx1-2P42580 305 aa13.45□□□□□ -0.26
Clip1-202ENSMUST00000063905 Tbc1d32Q3URV1 1296 aa13.45□□□□□ -0.26
Clip1-202ENSMUST00000063905 Bcar3Q9QZK2 820 aa13.45□□□□□ -0.26
Clip1-202ENSMUST00000063905 Tbc1d9Q3UYK3 1264 aa13.44□□□□□ -0.26
Clip1-202ENSMUST00000063905 Tgfb1i1Q62219 461 aa13.44□□□□□ -0.26
Clip1-202ENSMUST00000063905 Ush1cQ9ES64 910 aa13.44□□□□□ -0.26
Clip1-202ENSMUST00000063905 GorabQ8BRM2 368 aa13.44□□□□□ -0.26
Clip1-202ENSMUST00000063905 Ppm1mQ8BU27 406 aa13.44□□□□□ -0.26
Clip1-202ENSMUST00000063905 Tmc1Q8R4P5 757 aa13.44□□□□□ -0.26
Clip1-202ENSMUST00000063905 Pm20d1Q8C165 503 aa13.44□□□□□ -0.26
Clip1-202ENSMUST00000063905 Ankrd23Q812A3 306 aa13.43□□□□□ -0.26
Clip1-202ENSMUST00000063905 Hdac6Q9Z2V5 1149 aa13.43□□□□□ -0.26
Clip1-202ENSMUST00000063905 Hsp90b1P08113 802 aaKnown RBP13.42□□□□□ -0.26
Clip1-202ENSMUST00000063905 Fkbp5Q64378 456 aa13.42□□□□□ -0.26
Clip1-202ENSMUST00000063905 Syde2E9PUP1 1314 aa13.42□□□□□ -0.26
Clip1-202ENSMUST00000063905 Pa2g4P50580 394 aaKnown RBP13.42□□□□□ -0.26
Clip1-202ENSMUST00000063905 Ddb1Q3U1J4 1140 aaKnown RBP13.42□□□□□ -0.26
Clip1-202ENSMUST00000063905 Mum1Q6DID5 682 aa13.42□□□□□ -0.26
Clip1-202ENSMUST00000063905 Akap11E9Q777 1895 aa13.42□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms