RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Slc26a8Q8R0C3 999 aa11.63□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Tomm22Q9CPQ3 142 aa11.63□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Dnajc10Q9DC23 793 aa11.63□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Hecw2Q6I6G8 1578 aa11.63□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Cspp1B2RX88 1205 aa11.62□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Pdzrn3Q69ZS0 1063 aa11.62□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Hnrnpul1Q8VDM6 859 aaKnown RBP11.62□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Gm45015A0A140LII9 184 aa11.62□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Gm18336A0A140LIU8 765 aa11.62□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Gm9992B2RWK3 458 aa11.62□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Unc93aQ710D3 458 aa11.62□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Stx6Q9JKK1 255 aa11.62□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Adcy5P84309 1262 aa11.62□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Frmd3Q8BHD4 595 aa11.62□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Cchcr1Q8K2I2 770 aa11.62□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Mcmdc2E9Q956 681 aa11.61□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Mmp8O70138 465 aa11.61□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Cnnm1Q0GA42 951 aa11.61□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Rnf20Q5DTM8 973 aa11.61□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Fam50bQ9WTJ8 334 aa11.61□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Adam1bQ8R534 806 aa11.61□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Gzf1Q4VBD9 706 aa11.6□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Gimap6Q8K349 305 aa11.6□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Atp7bQ64446 1462 aa11.6□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Mctp1E9PV86 951 aa11.6□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 EngaseQ8BX80 734 aa11.6□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Nup88Q8CEC0 753 aaKnown RBP11.6□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Pmfbp1Q9WVQ0 1022 aa11.6□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Gm21698A0A087WQP8 267 aa11.6□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 PtpruB1AUH1 1446 aa11.6□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Gm21671G3UY31 267 aa11.6□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Ccdc178Q8CDV0 866 aa11.6□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 NaspQ99MD9 773 aaKnown RBP11.6□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Cavin1O54724 392 aa11.59□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 EspnlQ3UYR4 1005 aa11.59□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Map3k2Q61083 619 aa11.59□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 PsapQ61207 557 aaKnown RBP11.59□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Polr3dQ91WD1 398 aa11.59□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Edc3Q8K2D3 508 aaKnown RBP11.59□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Adamts7Q68SA9 1657 aa11.59□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Zscan25B2RX31 543 aa11.59□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Abca14E9Q8F8 1683 aa11.59□□□□□ -0.55
Pcdh1-201ENSMUST00000057185 Ier5O89113 308 aa11.58□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Strn4P58404 760 aa11.58□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Cct4P80315 539 aaKnown RBP11.58□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Tsr2Q8C8T8 191 aa11.58□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 TnmdQ9EP64 317 aa11.58□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Snx13Q6PHS6 957 aa11.58□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 BcanQ61361 883 aa11.58□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 TimelessQ9R1X4 1197 aa11.58□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Ncapd2Q8K2Z4 1392 aa11.58□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Arhgef28P97433 1693 aa11.57□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 EzrP26040 586 aaKnown RBP11.57□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Anapc15P60007 132 aa11.57□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Sipa1l1Q8C0T5 1782 aa11.57□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Ddx19aQ61655 478 aaKnown RBP11.57□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Ggt6Q6PDE7 497 aa11.57□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Med4Q9CQA5 270 aa11.57□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Mmel1Q9JLI3 765 aa11.57□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 PdcQ9QW08 244 aa11.57□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Psma5Q9Z2U1 241 aaKnown RBP11.57□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 NcapgE9PWG6 1004 aa11.57□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Tlr7P58681 1050 aa11.56□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Zdhhc9P59268 364 aa11.56□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Gse1Q3U3C9 1213 aa11.56□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Atf3Q60765 181 aa11.56□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Hook1Q8BIL5 728 aa11.56□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Kcnh5Q920E3 988 aa11.56□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Trpm1Q2TV84 1622 aa11.56□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Dzip1Q8BMD2 852 aa11.56□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Mum1Q6DID5 682 aa11.56□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Arhgef1Q61210 920 aaKnown RBP11.55□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Ppfia1B2RXQ2 1266 aa11.55□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Cfap73J3QPZ5 306 aa11.55□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Nol10Q5RJG1 687 aaKnown RBP11.55□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Rbm8a2A0A0N4SUH6 174 aa11.55□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Fam184aE9PW83 1143 aa11.55□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 PnnO35691 725 aaKnown RBP11.55□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Syt1P46096 421 aa11.55□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Ercc3P49135 783 aa11.55□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 CebpzP53569 1052 aaKnown RBP11.55□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Ube2hP62257 183 aa11.55□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Cbx1P83917 185 aaKnown RBP11.55□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Hvcn1Q3U2S8 269 aa11.55□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Sirt1Q923E4 737 aa11.55□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Rbm8aQ9CWZ3 174 aa11.55□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Gemin5Q8BX17 1502 aaKnown RBP11.55□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Irgm2A0A140LIF8 407 aa11.54□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Vwa3bJ9JI28 736 aa11.54□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Ddx17Q501J6 650 aaKnown RBP11.54□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Ltv1Q6NSQ7 470 aaKnown RBP11.54□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Kif3aP28741 701 aa11.54□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 GpkowQ56A08 488 aa11.54□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Utp18Q5SSI6 552 aaKnown RBP11.54□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Clcn1Q64347 994 aa11.54□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Tti2Q8BGV4 512 aa11.54□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 TkfcQ8VC30 578 aa11.54□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Amotl1Q9D4H4 968 aa11.54□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Foxp4Q9DBY0 795 aaKnown RBP11.54□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Znf335A2A5K6 1337 aa11.54□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 95.3 ms