RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Tmco5aQ9D9D5 303 aa18.01■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Mtus1Q5HZI1 1210 aa18.01■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Prpf40aQ9R1C7 953 aaKnown RBP18■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Nek5Q7TSC3 627 aa18■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Tbc1d7Q9D0K0 293 aa18■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Q9D5Q8 446 aa18■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Stx6Q9JKK1 255 aa18■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Ppfia3P60469 1194 aa18■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Ranbp1P34022 203 aaKnown RBP18■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Armc9Q9D2I5 817 aa18■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Cbfa2t2O70374 594 aa18■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Ube2hP62257 183 aa18■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Atf3Q60765 181 aa18■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Usp11Q99K46 921 aa18■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Sil1Q9EPK6 465 aa18■□□□□ 0.47
Ubr3-201ENSMUST00000055758 WrnO09053 1401 aa17.99■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Akap2O54931 893 aa17.99■□□□□ 0.47
Ubr3-201ENSMUST00000055758 IkbkgO88522 412 aa17.99■□□□□ 0.47
Ubr3-201ENSMUST00000055758 L3mbtl2P59178 703 aa17.99■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Ankrd40Q5SUE8 363 aa17.99■□□□□ 0.47
Ubr3-201ENSMUST00000055758 EvcP57680 1005 aa17.99■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Ddx19aQ61655 478 aaKnown RBP17.99■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Cnga2Q62398 664 aa17.99■□□□□ 0.47
Ubr3-201ENSMUST00000055758 PalmQ9Z0P4 383 aa17.99■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Ncbp1Q3UYV9 790 aaKnown RBP17.99■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Fermt2Q8CIB5 680 aa17.99■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Ankrd1Q9CR42 319 aa17.99■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Ccdc148Q6P5U8 527 aa17.99■□□□□ 0.47
Ubr3-201ENSMUST00000055758 NinlQ6ZQ12 1394 aa17.99■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Cct4P80315 539 aaKnown RBP17.98■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Igbp1bQ9QZ29 343 aa17.98■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Terf2O35144 541 aa17.98■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Spa17Q62252 149 aa17.98■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Btbd11Q6GQW0 1109 aa17.98■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Nsrp1Q5NCR9 542 aa17.98■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Ccdc150Q8CDI7 1110 aa17.98■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Matr3Q8K310 846 aaKnown RBP17.98■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Polr3dQ91WD1 398 aa17.98■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Ppfibp1Q8C8U0 969 aaKnown RBP17.97■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Baiap2l1Q9DBJ3 514 aa17.97■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Fam76aQ922G2 307 aa17.97■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Wdr63B2RY71 923 aa17.97■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Tmem67Q8BR76 992 aa17.97■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Sparcl1P70663 650 aa17.97■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Sf3b2Q3UJB0 878 aaKnown RBP17.97■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Ctdp1Q7TSG2 960 aa17.97■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Ccdc94Q9D6J3 314 aa17.97■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Cpsf2O35218 782 aaKnown RBP17.96■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Dennd6aQ8BH65 605 aa17.96■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Clul1Q3ZRW6 464 aa17.96■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Kif2aP28740 705 aa17.96■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Zfpm1O35615 995 aa17.96■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Frat2Q8K025 231 aa17.96■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Mkrn1Q9QXP6 481 aa17.96■□□□□ 0.47
Ubr3-201ENSMUST00000055758 Cfap73J3QPZ5 306 aa17.96■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Gle1Q8R322 699 aa17.96■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Calml4Q91WQ9 153 aa17.96■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Diaph1O08808 1255 aa17.95■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Usp25P57080 1055 aa17.95■□□□□ 0.46
Ubr3-201ENSMUST00000055758 SfswapQ3USH5 945 aaKnown RBP17.95■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Fkbp5Q64378 456 aa17.95■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Speer4bQ9D9F7 267 aa17.95■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Bcar3Q9QZK2 820 aa17.95■□□□□ 0.46
Ubr3-201ENSMUST00000055758 NapbP28663 298 aa17.95■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Rad23bP54728 416 aa17.95■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Gm21663A0A0G2JE01 267 aa17.94■□□□□ 0.46
Ubr3-201ENSMUST00000055758 5031410I06RikE9Q4E0 267 aa17.94■□□□□ 0.46
Ubr3-201ENSMUST00000055758 E9QMW4 1145 aa17.94■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Gm5862K7N5V5 267 aa17.94■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Gm10220K7N660 267 aa17.94■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Smarcad1Q04692 1021 aa17.94■□□□□ 0.46
Ubr3-201ENSMUST00000055758 LyarQ08288 388 aaKnown RBP17.94■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Tbc1d9Q3UYK3 1264 aa17.94■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Cplx4Q80WM3 160 aa17.94■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Ankrd49Q8VE42 238 aa17.94■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Znf394Q9Z1D9 521 aa17.94■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Atxn3Q9CVD2 355 aa17.94■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Sh2d4bA6X942 431 aa17.94■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Limch1Q3UH68 1057 aa17.94■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Smc5Q8CG46 1101 aaKnown RBP17.94■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Neurog2P70447 263 aa17.94■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Kif5bQ61768 963 aa17.94■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Larp6Q8BN59 492 aa17.94■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Gucy1a3Q9ERL9 691 aa17.94■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Nsd2Q8BVE8 1365 aa17.94■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Olr1Q9EQ09 363 aa17.94■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Hip1rQ9JKY5 1068 aa17.94■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Noc2lQ9WV70 747 aaKnown RBP17.94■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Ano6Q6P9J9 911 aa17.93■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Sec62Q8BU14 398 aaKnown RBP17.93■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Vps16Q920Q4 839 aa17.93■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Trim34aQ99PP6 485 aa17.93■□□□□ 0.46
Ubr3-201ENSMUST00000055758 ScaperF8VQ70 1398 aaKnown RBP17.93■□□□□ 0.46
Ubr3-201ENSMUST00000055758 EappQ5BU09 281 aa17.93■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Gas8Q60779 478 aa17.93■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Vps8Q0P5W1 1427 aa17.93■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Shroom4Q1W617 1475 aa17.93■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Ppp1r42Q8R1Z4 357 aa17.93■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Zbtb3Q91X45 518 aa17.93■□□□□ 0.46
Ubr3-201ENSMUST00000055758 Uso1Q9Z1Z0 959 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 9.6 ms