RNA–Protein interactions for RNA: ENSMUST00000050078.12

Sdf4-201, Transcript of 45 kDa calcium-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdf4, Length 5,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4-201ENSMUST00000050078 Ccdc39Q9D5Y1 937 aa14.59□□□□□ -0.07
Sdf4-201ENSMUST00000050078 Echdc1Q9D9V3 322 aa14.59□□□□□ -0.07
Sdf4-201ENSMUST00000050078 CenphQ9QYM8 241 aa14.59□□□□□ -0.07
Sdf4-201ENSMUST00000050078 Snx13Q6PHS6 957 aa14.59□□□□□ -0.07
Sdf4-201ENSMUST00000050078 Ces1hD3Z298 562 aa14.59□□□□□ -0.07
Sdf4-201ENSMUST00000050078 Ddx46Q569Z5 1032 aaKnown RBP14.59□□□□□ -0.07
Sdf4-201ENSMUST00000050078 Cfap69Q8BH53 942 aa14.59□□□□□ -0.07
Sdf4-201ENSMUST00000050078 Chd1lQ9CXF7 900 aa14.59□□□□□ -0.07
Sdf4-201ENSMUST00000050078 Dhx8A2A4P0 1244 aaKnown RBP14.58□□□□□ -0.07
Sdf4-201ENSMUST00000050078 Ppp1r3fQ9JIG4 799 aa14.58□□□□□ -0.07
Sdf4-201ENSMUST00000050078 Bicdl1A0JNT9 577 aa14.58□□□□□ -0.08
Sdf4-201ENSMUST00000050078 NgdnQ9DB96 315 aaKnown RBP14.58□□□□□ -0.08
Sdf4-201ENSMUST00000050078 DmtnQ9WV69 405 aa14.58□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Larp6Q8BN59 492 aa14.58□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Tmc2Q8R4P4 888 aa14.58□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Cwc15Q9JHS9 229 aaKnown RBP14.58□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Cyp26c1B2RXA7 518 aa14.58□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Stim1P70302 685 aa14.58□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Commd10Q8JZY2 202 aa14.58□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Trim30cD3YVI9 513 aa14.57□□□□□ -0.08
Sdf4-201ENSMUST00000050078 NapbP28663 298 aa14.57□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Acsbg1Q99PU5 721 aa14.57□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Igbp1bQ9QZ29 343 aa14.57□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Pa2g4P50580 394 aaKnown RBP14.57□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Atp8b2P98199 1209 aa14.57□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Jarid2Q62315 1234 aa14.57□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Znf653Q6YND2 615 aa14.57□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Aldh8a1Q8BH00 487 aa14.57□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Luzp1Q8R4U7 1068 aaKnown RBP14.57□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Shroom2A2ALU4 1481 aa14.57□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Phldb2Q8K1N2 1249 aa14.57□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Ankrd50F7BE84 1390 aa14.57□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Myd88P22366 296 aa14.57□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Spag5Q7TME2 1165 aa14.57□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Nlrp3Q8R4B8 1033 aa14.57□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Cfap45Q9D9U9 551 aa14.57□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Il4rP16382 810 aa14.56□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Mrps27Q8BK72 415 aaKnown RBP14.56□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Rbm8a2A0A0N4SUH6 174 aa14.56□□□□□ -0.08
Sdf4-201ENSMUST00000050078 AU022751B1B0V2 589 aa14.56□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Rbm8aQ9CWZ3 174 aa14.56□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Gapvd1Q6PAR5 1458 aa14.56□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Cfap73J3QPZ5 306 aa14.56□□□□□ -0.08
Sdf4-201ENSMUST00000050078 CebpzP53569 1052 aaKnown RBP14.56□□□□□ -0.08
Sdf4-201ENSMUST00000050078 LyarQ08288 388 aaKnown RBP14.56□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Ddx58Q6Q899 926 aa14.56□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Aifm3Q3TY86 605 aa14.56□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Trim11Q99PQ2 467 aa14.56□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Ccdc96Q9CR92 584 aa14.55□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Bloc1s2Q9CWG9 143 aa14.55□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Lmbr1Q9JIT0 490 aa14.55□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Asxl2Q8BZ32 1370 aa14.55□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Pde4bB1AWC9 736 aa14.55□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Stat1P42225 749 aa14.55□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Bms1Q6PGF5 1284 aaKnown RBP14.55□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Ccdc158Q8CDI6 1109 aa14.55□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Cep89Q9CZX2 791 aa14.55□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Usp25P57080 1055 aa14.55□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Frmpd2A0A140LI67 1392 aa14.54□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Pip4k2aO70172 405 aa14.54□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Gse1Q3U3C9 1213 aa14.54□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Sass6Q80UK7 654 aa14.54□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Wasf1Q8R5H6 559 aa14.54□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Lmbr1lQ9D1E5 489 aa14.54□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Jakmip2D3YXK0 820 aa14.54□□□□□ -0.08
Sdf4-201ENSMUST00000050078 SfswapQ3USH5 945 aaKnown RBP14.54□□□□□ -0.08
Sdf4-201ENSMUST00000050078 IkQ9Z1M8 557 aaKnown RBP14.54□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Hoxb7P09024 217 aa14.54□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Cavin2Q63918 418 aaKnown RBP14.54□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Nol11Q8BJW5 723 aaKnown RBP14.54□□□□□ -0.08
Sdf4-201ENSMUST00000050078 MicalclQ9D5U9 680 aa14.54□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Mcmdc2E9Q956 681 aa14.54□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Pafah1b1P63005 410 aaKnown RBP14.54□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Gnat3Q3V3I2 354 aa14.54□□□□□ -0.08
Sdf4-201ENSMUST00000050078 TimelessQ9R1X4 1197 aa14.54□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Tmem87bQ8BKU8 555 aa14.53□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Kdm3bQ6ZPY7 1562 aa14.53□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Uri1Q3TLD5 531 aa14.53□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Nup133Q8R0G9 1155 aa14.53□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Rbbp8nlA2ABX0 614 aa14.53□□□□□ -0.08
Sdf4-201ENSMUST00000050078 GptQ8QZR5 496 aa14.53□□□□□ -0.08
Sdf4-201ENSMUST00000050078 RestQ8VIG1 1082 aa14.52□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Themis2Q91YX0 663 aa14.52□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Riok1Q922Q2 567 aa14.52□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Ythdc2B2RR83 1445 aaKnown RBP14.52□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Ppp4r3bQ922R5 820 aa14.52□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Tmem94Q7TSH8 1360 aa14.52□□□□□ -0.08
Sdf4-201ENSMUST00000050078 Zscan29E9Q5B4 869 aa14.52□□□□□ -0.09
Sdf4-201ENSMUST00000050078 Ercc3P49135 783 aa14.52□□□□□ -0.09
Sdf4-201ENSMUST00000050078 Rbm19Q8R3C6 952 aaKnown RBP14.52□□□□□ -0.09
Sdf4-201ENSMUST00000050078 Igflr1Q3U4N7 345 aa14.52□□□□□ -0.09
Sdf4-201ENSMUST00000050078 Mrpl44Q9CY73 333 aaKnown RBP14.52□□□□□ -0.09
Sdf4-201ENSMUST00000050078 Stx1aO35526 288 aa14.51□□□□□ -0.09
Sdf4-201ENSMUST00000050078 Pdcl2Q78Y63 240 aa14.51□□□□□ -0.09
Sdf4-201ENSMUST00000050078 Rnf187Q8BFX1 236 aa14.51□□□□□ -0.09
Sdf4-201ENSMUST00000050078 Galntl5Q9D4M9 431 aa14.51□□□□□ -0.09
Sdf4-201ENSMUST00000050078 Lrrc9Q8CDN9 1456 aa14.51□□□□□ -0.09
Sdf4-201ENSMUST00000050078 Zbtb45Q52KG4 520 aa14.51□□□□□ -0.09
Sdf4-201ENSMUST00000050078 Cep120Q7TSG1 988 aa14.51□□□□□ -0.09
Sdf4-201ENSMUST00000050078 Znf131Q8K3J5 619 aa14.51□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms