RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Gm10220K7N660 267 aa28.42■■■□□ 2.14
Cln6-201ENSMUST00000034776 Tlr7P58681 1050 aa28.42■■■□□ 2.14
Cln6-201ENSMUST00000034776 Hoxa7P02830 229 aa28.41■■■□□ 2.14
Cln6-201ENSMUST00000034776 Pdia3P27773 505 aaKnown RBP28.4■■■□□ 2.14
Cln6-201ENSMUST00000034776 Igfbp6P47880 238 aa28.4■■■□□ 2.14
Cln6-201ENSMUST00000034776 Cnnm1Q0GA42 951 aa28.4■■■□□ 2.14
Cln6-201ENSMUST00000034776 PigbQ9JJQ0 542 aa28.4■■■□□ 2.14
Cln6-201ENSMUST00000034776 Bcar3Q9QZK2 820 aa28.4■■■□□ 2.14
Cln6-201ENSMUST00000034776 Ppp6r3Q922D4 844 aa28.4■■■□□ 2.14
Cln6-201ENSMUST00000034776 Prkab2Q6PAM0 271 aa28.39■■■□□ 2.14
Cln6-201ENSMUST00000034776 Smim5Q8BT42 78 aa28.39■■■□□ 2.14
Cln6-201ENSMUST00000034776 Nucb1Q02819 459 aaKnown RBP28.38■■■□□ 2.13
Cln6-201ENSMUST00000034776 Map3k13Q1HKZ5 959 aa28.38■■■□□ 2.13
Cln6-201ENSMUST00000034776 Ppm1mQ8BU27 406 aa28.38■■■□□ 2.13
Cln6-201ENSMUST00000034776 Eif3aP23116 1344 aaKnown RBP28.38■■■□□ 2.13
Cln6-201ENSMUST00000034776 Gm21680A0A0G2JGR8 267 aa28.37■■■□□ 2.13
Cln6-201ENSMUST00000034776 ArxO35085 564 aa28.37■■■□□ 2.13
Cln6-201ENSMUST00000034776 Bicc1Q99MQ1 977 aaKnown RBP28.37■■■□□ 2.13
Cln6-201ENSMUST00000034776 Efcab2Q9CQ46 164 aa28.36■■■□□ 2.13
Cln6-201ENSMUST00000034776 Zkscan2G3X952 960 aa28.36■■■□□ 2.13
Cln6-201ENSMUST00000034776 Ints5Q8CHT3 1018 aa28.35■■■□□ 2.13
Cln6-201ENSMUST00000034776 Mum1Q6DID5 682 aa28.34■■■□□ 2.13
Cln6-201ENSMUST00000034776 Cyb5rlB1AS42 316 aa28.34■■■□□ 2.13
Cln6-201ENSMUST00000034776 Ptpdc1Q6NZK8 747 aa28.33■■■□□ 2.13
Cln6-201ENSMUST00000034776 Tceal9Q9DD24 104 aa28.33■■■□□ 2.13
Cln6-201ENSMUST00000034776 Ttll7A4Q9F0 912 aa28.33■■■□□ 2.13
Cln6-201ENSMUST00000034776 Tgfb1i1Q62219 461 aa28.33■■■□□ 2.13
Cln6-201ENSMUST00000034776 Ppip5k2Q6ZQB6 1129 aa28.33■■■□□ 2.13
Cln6-201ENSMUST00000034776 Tfip11Q9ERA6 838 aaKnown RBP28.33■■■□□ 2.13
Cln6-201ENSMUST00000034776 Ddx60E9PZQ1 1711 aa28.32■■■□□ 2.12
Cln6-201ENSMUST00000034776 Grm8P47743 908 aa28.31■■■□□ 2.12
Cln6-201ENSMUST00000034776 GorabQ8BRM2 368 aa28.31■■■□□ 2.12
Cln6-201ENSMUST00000034776 Gimap5Q8BWF2 308 aa28.31■■■□□ 2.12
Cln6-201ENSMUST00000034776 Tiam2Q6ZPF3 1715 aa28.31■■■□□ 2.12
Cln6-201ENSMUST00000034776 Slc4a10Q5DTL9 1118 aa28.3■■■□□ 2.12
Cln6-201ENSMUST00000034776 Slc39a6Q8C145 765 aa28.3■■■□□ 2.12
Cln6-201ENSMUST00000034776 Flad1Q8R123 492 aa28.3■■■□□ 2.12
Cln6-201ENSMUST00000034776 Akap11E9Q777 1895 aa28.29■■■□□ 2.12
Cln6-201ENSMUST00000034776 AceP09470 1312 aa28.29■■■□□ 2.12
Cln6-201ENSMUST00000034776 Q9D2X8 372 aa28.29■■■□□ 2.12
Cln6-201ENSMUST00000034776 RestQ8VIG1 1082 aa28.28■■■□□ 2.12
Cln6-201ENSMUST00000034776 Lmbr1lQ9D1E5 489 aa28.28■■■□□ 2.12
Cln6-201ENSMUST00000034776 Cct4P80315 539 aaKnown RBP28.28■■■□□ 2.12
Cln6-201ENSMUST00000034776 Shank2Q80Z38 1476 aa28.28■■■□□ 2.12
Cln6-201ENSMUST00000034776 Terf2O35144 541 aa28.27■■■□□ 2.12
Cln6-201ENSMUST00000034776 MypnQ5DTJ9 1315 aa28.25■■■□□ 2.11
Cln6-201ENSMUST00000034776 Hmox1P14901 289 aa28.25■■■□□ 2.11
Cln6-201ENSMUST00000034776 Ankle2Q6P1H6 964 aa28.25■■■□□ 2.11
Cln6-201ENSMUST00000034776 Noc3lQ8VI84 807 aaKnown RBP28.25■■■□□ 2.11
Cln6-201ENSMUST00000034776 Tpx2A2APB8 745 aaKnown RBP28.24■■■□□ 2.11
Cln6-201ENSMUST00000034776 Trim52Q8CDV4 233 aa28.24■■■□□ 2.11
Cln6-201ENSMUST00000034776 PappaQ8R4K8 1624 aa28.24■■■□□ 2.11
Cln6-201ENSMUST00000034776 Kiaa0232Q80U59 1396 aaKnown RBP28.24■■■□□ 2.11
Cln6-201ENSMUST00000034776 Ybx3Q9JKB3 361 aaKnown RBP28.24■■■□□ 2.11
Cln6-201ENSMUST00000034776 Rnf123Q5XPI3 1314 aa28.23■■■□□ 2.11
Cln6-201ENSMUST00000034776 Elp1Q7TT37 1333 aaKnown RBP28.23■■■□□ 2.11
Cln6-201ENSMUST00000034776 VgfQ0VGU4 617 aa28.23■■■□□ 2.11
Cln6-201ENSMUST00000034776 Abcc4E9Q236 1325 aa28.23■■■□□ 2.11
Cln6-201ENSMUST00000034776 Erbb4Q61527 1308 aa28.23■■■□□ 2.11
Cln6-201ENSMUST00000034776 Catsper2A2ARP9 588 aa28.22■■■□□ 2.11
Cln6-201ENSMUST00000034776 Erc2Q6PH08 957 aa28.22■■■□□ 2.11
Cln6-201ENSMUST00000034776 Zeb2Q9R0G7 1215 aa28.22■■■□□ 2.11
Cln6-201ENSMUST00000034776 EngaseQ8BX80 734 aa28.22■■■□□ 2.11
Cln6-201ENSMUST00000034776 Hspa2P17156 633 aa28.21■■■□□ 2.11
Cln6-201ENSMUST00000034776 Ripor2Q80U16 1078 aa28.21■■■□□ 2.11
Cln6-201ENSMUST00000034776 Shank3Q4ACU6 1730 aa28.21■■■□□ 2.11
Cln6-201ENSMUST00000034776 Kcnh4A2A5F7 1018 aa28.21■■■□□ 2.11
Cln6-201ENSMUST00000034776 Kdm4cQ8VCD7 1054 aa28.21■■■□□ 2.11
Cln6-201ENSMUST00000034776 Znf526Q8BI66 675 aa28.2■■■□□ 2.1
Cln6-201ENSMUST00000034776 Prune1Q8BIW1 454 aa28.2■■■□□ 2.1
Cln6-201ENSMUST00000034776 Crb1Q8VHS2 1405 aa28.19■■■□□ 2.1
Cln6-201ENSMUST00000034776 Pa2g4P50580 394 aaKnown RBP28.19■■■□□ 2.1
Cln6-201ENSMUST00000034776 Ddx54Q8K4L0 874 aaKnown RBP28.19■■■□□ 2.1
Cln6-201ENSMUST00000034776 CalcaP70160 136 aa28.19■■■□□ 2.1
Cln6-201ENSMUST00000034776 1700010I14RikQ7TPG0 532 aa28.19■■■□□ 2.1
Cln6-201ENSMUST00000034776 Lrrc59Q922Q8 307 aaKnown RBP28.19■■■□□ 2.1
Cln6-201ENSMUST00000034776 Col4a1P02463 1669 aa28.18■■■□□ 2.1
Cln6-201ENSMUST00000034776 Nlrp9bQ66X22 1003 aa28.18■■■□□ 2.1
Cln6-201ENSMUST00000034776 Nol8Q3UHX0 1147 aaKnown RBP28.18■■■□□ 2.1
Cln6-201ENSMUST00000034776 Zbtb40Q6PCS8 1258 aa28.17■■■□□ 2.1
Cln6-201ENSMUST00000034776 Ddx58Q6Q899 926 aa28.17■■■□□ 2.1
Cln6-201ENSMUST00000034776 Zbtb3Q91X45 518 aa28.17■■■□□ 2.1
Cln6-201ENSMUST00000034776 Htatsf1Q8BGC0 757 aa28.15■■■□□ 2.1
Cln6-201ENSMUST00000034776 Bcl2l12Q9D3J3 255 aa28.14■■■□□ 2.1
Cln6-201ENSMUST00000034776 Ccnl1Q52KE7 532 aaKnown RBP28.13■■■□□ 2.09
Cln6-201ENSMUST00000034776 Unc5clQ6R653 518 aa28.13■■■□□ 2.09
Cln6-201ENSMUST00000034776 Mylk2Q8VCR8 613 aa28.13■■■□□ 2.09
Cln6-201ENSMUST00000034776 Syde2E9PUP1 1314 aa28.12■■■□□ 2.09
Cln6-201ENSMUST00000034776 Ank1Q02357 1862 aa28.12■■■□□ 2.09
Cln6-201ENSMUST00000034776 Cers3Q1A3B0 383 aa28.11■■■□□ 2.09
Cln6-201ENSMUST00000034776 InsrrQ9WTL4 1300 aa28.11■■■□□ 2.09
Cln6-201ENSMUST00000034776 NmiO35309 314 aa28.1■■■□□ 2.09
Cln6-201ENSMUST00000034776 Fkbp5Q64378 456 aa28.1■■■□□ 2.09
Cln6-201ENSMUST00000034776 Nsfl1cQ9CZ44 370 aaKnown RBP28.1■■■□□ 2.09
Cln6-201ENSMUST00000034776 ApobrQ8VBT6 942 aa28.1■■■□□ 2.09
Cln6-201ENSMUST00000034776 Cap2Q9CYT6 476 aa28.1■■■□□ 2.09
Cln6-201ENSMUST00000034776 Hsp90aa1P07901 733 aaKnown RBP28.09■■■□□ 2.09
Cln6-201ENSMUST00000034776 Fam228bQ497Q6 232 aa28.09■■■□□ 2.09
Cln6-201ENSMUST00000034776 Soga3Q6NZL0 945 aa28.09■■■□□ 2.09
Cln6-201ENSMUST00000034776 Gm12185Q5NCB2 835 aa28.08■■■□□ 2.09
Retrieved 100 of 22,080 RNA–protein pairs in 9.6 ms