RNA–Protein interactions for RNA: ENSMUST00000032168.6

Sec61a1-201, Transcript of Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sec61a1, Length 3,172 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1-201ENSMUST00000032168 Jarid2Q62315 1234 aa20.69■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 Prkab2Q6PAM0 271 aa20.69■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 Larp1Q6ZQ58 1072 aaKnown RBP20.69■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 Ttll7A4Q9F0 912 aa20.69■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 Acsbg1Q99PU5 721 aa20.69■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 Zbtb45Q52KG4 520 aa20.68■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 1700010I14RikQ7TPG0 532 aa20.68■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 Wnk3Q80XP9 1757 aa20.68■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 Cnnm1Q0GA42 951 aa20.68■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 Irf9Q61179 399 aa20.68■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 Kdm4cQ8VCD7 1054 aa20.68■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 Stk3Q9JI10 497 aa20.68■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 Taf7Q9R1C0 341 aa20.67■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 ScaperF8VQ70 1398 aaKnown RBP20.67■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 Asic4Q7TNS7 539 aa20.67■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 Bicc1Q99MQ1 977 aaKnown RBP20.66■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 Rsph3aQ3UFY4 516 aa20.66■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 Edc3Q8K2D3 508 aaKnown RBP20.66■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 Atg3Q9CPX6 314 aa20.66■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 Zkscan16A2ALW2 728 aa20.65■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 Tmem119Q8R138 280 aa20.65■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 Flt4P35917 1363 aa20.64■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 Unc5clQ6R653 518 aa20.64■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 Ccdc9Q8VC31 543 aaKnown RBP20.64■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 Lmbr1lQ9D1E5 489 aa20.64■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 Speer4bQ9D9F7 267 aa20.63■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 Elp1Q7TT37 1333 aaKnown RBP20.63■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 Cyp27a1Q9DBG1 533 aa20.62■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 BcorQ8CGN4 1759 aa20.62■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 Ets1P27577 440 aa20.62■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 Iqsec3Q3TES0 1195 aa20.61■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 Tceal9Q9DD24 104 aa20.61■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 Casq1O09165 405 aa20.61■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 DekQ7TNV0 380 aaKnown RBP20.61■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 EspnlQ3UYR4 1005 aa20.6■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 Gm21663A0A0G2JE01 267 aa20.6■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 Phactr2B1AVP0 632 aa20.6■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 Gm7361D3Z6R1 267 aa20.6■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 5031410I06RikE9Q4E0 267 aa20.6■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 Gm1979E9QAN3 267 aa20.6■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 Gm5862K7N5V5 267 aa20.6■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 Gm10220K7N660 267 aa20.6■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 DiexfQ8BTT6 772 aaKnown RBP20.6■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 Vsig10D3YX43 558 aa20.6■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 Grm8P47743 908 aa20.59■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 Bloc1s4Q8VED2 215 aa20.59■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 TefQ9JLC6 301 aa20.59■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 Smim5Q8BT42 78 aa20.59■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 Jakmip1Q8BVL9 626 aa20.59■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 Tns2Q8CGB6 1400 aa20.59■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 Mcm4P49717 862 aa20.58■□□□□ 0.89
Sec61a1-201ENSMUST00000032168 Zbtb3Q91X45 518 aa20.58■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 4930572O03RikQ8C5Y0 211 aa20.57■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 Pmfbp1Q9WVQ0 1022 aa20.57■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 Brf1Q8CFK2 676 aa20.57■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 Ppm1mQ8BU27 406 aa20.56■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 Mlh1Q9JK91 760 aa20.56■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 Zfp142G5E869 1843 aa20.56■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 Cct4P80315 539 aaKnown RBP20.56■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 Zpr1Q62384 459 aa20.56■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 Slc5a1Q8C3K6 665 aa20.56■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 Gdpd2Q9ESM6 539 aa20.56■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 Nol8Q3UHX0 1147 aaKnown RBP20.56■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 Efcab2Q9CQ46 164 aa20.56■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 Gm21680A0A0G2JGR8 267 aa20.55■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 Brpf1B2RRD7 1212 aa20.55■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 Clcn1Q64347 994 aa20.55■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 Ltbp4Q8K4G1 1666 aa20.55■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 NmiO35309 314 aa20.55■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 Tnks1bp1P58871 1720 aa20.55■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 4930504O13RikQ8C5Z9 145 aa20.55■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 Brinp3Q499E0 766 aa20.54■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 HellsQ60848 821 aa20.54■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 Mrps27Q8BK72 415 aaKnown RBP20.54■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 Fam228bQ497Q6 232 aa20.54■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 Eif3bQ8JZQ9 803 aaKnown RBP20.52■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 Abcc4E9Q236 1325 aa20.52■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 Slit1Q80TR4 1531 aa20.52■□□□□ 0.88
Sec61a1-201ENSMUST00000032168 Rasa1E9PYG6 1038 aa20.51■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Adora1Q60612 326 aa20.51■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Col4a1P02463 1669 aa20.51■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Eif3aP23116 1344 aaKnown RBP20.51■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 EvcP57680 1005 aa20.5■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Bag4Q8CI61 457 aa20.5■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Irx3P81067 507 aa20.5■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Ints5Q8CHT3 1018 aa20.5■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Taf5lQ91WQ5 589 aa20.5■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 MypnQ5DTJ9 1315 aa20.5■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 FocadA2AKG8 1798 aa20.5■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Zkscan1Q8BGS3 561 aaKnown RBP20.5■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 MccE9PWI3 1003 aa20.49■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 GpkowQ56A08 488 aa20.49■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Mum1Q6DID5 682 aa20.49■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 NexnQ7TPW1 607 aa20.49■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Il1rapl2Q9ERS6 686 aa20.49■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Zdhhc9P59268 364 aa20.49■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Dhx38Q80X98 1228 aa20.49■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Slc26a8Q8R0C3 999 aa20.48■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Ssfa2Q922B9 1252 aa20.48■□□□□ 0.87
Sec61a1-201ENSMUST00000032168 Noc3lQ8VI84 807 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms