RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Q7TT23 1179 aa16.02■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Rnf216P58283 853 aa16.02■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Ccdc148Q6P5U8 527 aa16.02■□□□□ 0.16
Col5a1-201ENSMUST00000028280 Ccdc150Q8CDI7 1110 aa16.02■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Slc4a2P13808 1237 aaKnown RBP16.02■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Gng11P61953 73 aa16.02■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Sparcl1P70663 650 aa16.02■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Cdc37l1Q9CZP7 335 aa16.02■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Ccdc186Q8C9S4 917 aa16.01■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Gjc1P28229 396 aa16.01■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Aimp1P31230 310 aaKnown RBP16.01■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Cpsf2O35218 782 aaKnown RBP16.01■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Naa25Q8BWZ3 972 aa16.01■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Tfip11Q9ERA6 838 aaKnown RBP16.01■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Calcoco1Q8CGU1 691 aa16.01■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Prpf40aQ9R1C7 953 aaKnown RBP16.01■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Rasal2E9PW37 1286 aa16.01■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Mcm4P49717 862 aa16.01■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Trim34aQ99PP6 485 aa16.01■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Gramd4Q8CB44 633 aa16■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Cep55Q8BT07 462 aa16■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Ccdc38Q8CDN8 563 aa16■□□□□ 0.15
Col5a1-201ENSMUST00000028280 SfpqQ8VIJ6 699 aaKnown RBP16■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Usp11Q99K46 921 aa16■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Ccdc170D3YXL0 722 aa16■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Taok3Q8BYC6 898 aa16■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Ano2Q8CFW1 1002 aa16■□□□□ 0.15
Col5a1-201ENSMUST00000028280 TkfcQ8VC30 578 aa16■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Plekhg5Q66T02 1073 aa16■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Ptpdc1Q6NZK8 747 aa16■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Cep120Q7TSG1 988 aa16■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Pde4cQ3UEI1 686 aa16■□□□□ 0.15
Col5a1-201ENSMUST00000028280 AidaQ8C4Q6 305 aa16■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Q9D9H8 365 aa16■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Mkrn1Q9QXP6 481 aa16■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Caprin2Q05A80 1031 aaKnown RBP16■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Jph4Q80WT0 628 aa15.99■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Plcd3Q8K2J0 785 aa15.99■□□□□ 0.15
Col5a1-201ENSMUST00000028280 MycnP03966 462 aaKnown RBP15.99■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Znf287Q9EQB9 759 aa15.99■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Igf2bp2Q5SF07 592 aaKnown RBP15.99■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Cplx4Q80WM3 160 aa15.99■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Cfap69Q8BH53 942 aa15.99■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Tmem132aQ922P8 1018 aa15.99■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Sept14Q9DA97 430 aa15.99■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Sil1Q9EPK6 465 aa15.99■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Nucb2P81117 420 aa15.99■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Btbd11Q6GQW0 1109 aa15.99■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Wwc1Q5SXA9 1104 aa15.99■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Bicd1Q8BR07 835 aa15.99■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Ttc19Q8CC21 365 aa15.99■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Trerf1Q8BXJ2 1205 aa15.99■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Neurog2P70447 263 aa15.98■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Sec62Q8BU14 398 aaKnown RBP15.98■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Zbtb22Q9Z0G7 638 aa15.98■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Nsrp1Q5NCR9 542 aa15.98■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Cnga2Q62398 664 aa15.98■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Apbb1ipQ8R5A3 670 aa15.98■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Bms1Q6PGF5 1284 aaKnown RBP15.98■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Znf394Q9Z1D9 521 aa15.98■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Map3k1P53349 1493 aa15.97■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Gm28510A0A087WP28 240 aa15.97■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Gas8Q60779 478 aa15.97■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Pabpn1Q8CCS6 302 aaKnown RBP15.97■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Ripk4Q9ERK0 786 aa15.97■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Vps36Q91XD6 386 aa15.97■□□□□ 0.15
Col5a1-201ENSMUST00000028280 SncbQ91ZZ3 133 aa15.97■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Rad23bP54728 416 aa15.97■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Cep19Q9CQA8 163 aa15.97■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Hs1bp3Q3TC93 395 aa15.97■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Mum1Q6DID5 682 aa15.97■□□□□ 0.15
Col5a1-201ENSMUST00000028280 RpgrQ9R0X5 1001 aa15.96■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Fkbp5Q64378 456 aa15.96■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Brf1Q8CFK2 676 aa15.96■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Brd3Q8K2F0 726 aaKnown RBP15.96■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Smarcad1Q04692 1021 aa15.96■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Lrsam1Q80ZI6 727 aa15.96■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Yeats4Q9CR11 227 aaKnown RBP15.96■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Noc2lQ9WV70 747 aaKnown RBP15.96■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Opa1P58281 960 aa15.96■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Bank1Q80VH0 783 aa15.96■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Cdk19Q8BWD8 501 aa15.96■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Rassf4Q8CB96 322 aa15.96■□□□□ 0.15
Col5a1-201ENSMUST00000028280 Ppfibp1Q8C8U0 969 aaKnown RBP15.96■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Hip1rQ9JKY5 1068 aa15.96■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Igbp1bQ9QZ29 343 aa15.96■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Sdc2P43407 202 aa15.95■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Pip4k2bQ80XI4 416 aa15.95■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Kiaa1524Q8BWY9 907 aa15.95■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Fam76aQ922G2 307 aa15.95■□□□□ 0.14
Col5a1-201ENSMUST00000028280 TchhA0A0B4J1F9 1599 aa15.95■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Zkscan7E9PVW1 718 aa15.95■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Matr3Q8K310 846 aaKnown RBP15.95■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Cib2Q9Z309 187 aa15.95■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Gm21698A0A087WQP8 267 aa15.95■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Eftud2O08810 971 aaKnown RBP15.95■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Stmn2P55821 179 aa15.95■□□□□ 0.14
Col5a1-201ENSMUST00000028280 FerP70451 823 aa15.95■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Soga3Q6NZL0 945 aa15.95■□□□□ 0.14
Col5a1-201ENSMUST00000028280 Tubb4bP68372 445 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms