RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Kiaa0753Q6A000 959 aa12.93□□□□□ -0.34
Msh3-201ENSMUST00000022220 Tomm22Q9CPQ3 142 aa12.93□□□□□ -0.34
Msh3-201ENSMUST00000022220 Wdr17E9Q271 1322 aa12.93□□□□□ -0.34
Msh3-201ENSMUST00000022220 Plcd3Q8K2J0 785 aa12.92□□□□□ -0.34
Msh3-201ENSMUST00000022220 Mapk8ip1Q9WVI9 707 aa12.92□□□□□ -0.34
Msh3-201ENSMUST00000022220 Gadd45bP22339 160 aa12.92□□□□□ -0.34
Msh3-201ENSMUST00000022220 Nip7Q9CXK8 180 aaKnown RBP12.92□□□□□ -0.34
Msh3-201ENSMUST00000022220 Fndc1E9Q043 1732 aa12.92□□□□□ -0.34
Msh3-201ENSMUST00000022220 Chd1P40201 1711 aa12.92□□□□□ -0.34
Msh3-201ENSMUST00000022220 Eif3aP23116 1344 aaKnown RBP12.92□□□□□ -0.34
Msh3-201ENSMUST00000022220 Ell2Q3UKU1 639 aa12.92□□□□□ -0.34
Msh3-201ENSMUST00000022220 R3hcc1Q8BSI6 488 aa12.92□□□□□ -0.34
Msh3-201ENSMUST00000022220 Tceanc2Q8R2M0 207 aa12.92□□□□□ -0.34
Msh3-201ENSMUST00000022220 Slc5a4bQ91ZP4 660 aa12.92□□□□□ -0.34
Msh3-201ENSMUST00000022220 Cdc42bpbQ7TT50 1713 aa12.91□□□□□ -0.34
Msh3-201ENSMUST00000022220 Washc4Q3UMB9 1173 aa12.91□□□□□ -0.34
Msh3-201ENSMUST00000022220 Mindy4Q3UQI9 744 aa12.91□□□□□ -0.34
Msh3-201ENSMUST00000022220 EappQ5BU09 281 aa12.91□□□□□ -0.34
Msh3-201ENSMUST00000022220 Mknk2Q8CDB0 459 aa12.91□□□□□ -0.34
Msh3-201ENSMUST00000022220 Adgrl1Q80TR1 1466 aa12.91□□□□□ -0.34
Msh3-201ENSMUST00000022220 Fam135bQ9DAI6 1403 aa12.91□□□□□ -0.34
Msh3-201ENSMUST00000022220 Taf3Q5HZG4 932 aa12.91□□□□□ -0.34
Msh3-201ENSMUST00000022220 Nap1l3Q794H2 544 aa12.91□□□□□ -0.34
Msh3-201ENSMUST00000022220 Cspp1B2RX88 1205 aa12.91□□□□□ -0.34
Msh3-201ENSMUST00000022220 EzrP26040 586 aaKnown RBP12.91□□□□□ -0.34
Msh3-201ENSMUST00000022220 PhaxQ9JJT9 385 aaKnown RBP12.91□□□□□ -0.34
Msh3-201ENSMUST00000022220 Ercc6l2Q9JIM3 1537 aa12.91□□□□□ -0.34
Msh3-201ENSMUST00000022220 Tom1O88746 492 aa12.9□□□□□ -0.34
Msh3-201ENSMUST00000022220 Dnajc2P54103 621 aaKnown RBP12.9□□□□□ -0.34
Msh3-201ENSMUST00000022220 Kif2cQ922S8 721 aa12.9□□□□□ -0.34
Msh3-201ENSMUST00000022220 Tbc1d7Q9D0K0 293 aa12.9□□□□□ -0.34
Msh3-201ENSMUST00000022220 LratQ9JI60 231 aa12.9□□□□□ -0.34
Msh3-201ENSMUST00000022220 Zeb2Q9R0G7 1215 aa12.9□□□□□ -0.34
Msh3-201ENSMUST00000022220 FancaQ9JL70 1439 aa12.9□□□□□ -0.34
Msh3-201ENSMUST00000022220 Ints3Q7TPD0 1041 aaKnown RBP12.9□□□□□ -0.34
Msh3-201ENSMUST00000022220 Nlrp3Q8R4B8 1033 aa12.9□□□□□ -0.34
Msh3-201ENSMUST00000022220 ScaperF8VQ70 1398 aaKnown RBP12.9□□□□□ -0.34
Msh3-201ENSMUST00000022220 Zscan25B2RX31 543 aa12.9□□□□□ -0.34
Msh3-201ENSMUST00000022220 Smim5Q8BT42 78 aa12.9□□□□□ -0.34
Msh3-201ENSMUST00000022220 Edc3Q8K2D3 508 aaKnown RBP12.9□□□□□ -0.34
Msh3-201ENSMUST00000022220 F2rP30558 430 aa12.89□□□□□ -0.35
Msh3-201ENSMUST00000022220 Agtpbp1Q641K1 1218 aa12.89□□□□□ -0.35
Msh3-201ENSMUST00000022220 Grpel1Q99LP6 217 aa12.89□□□□□ -0.35
Msh3-201ENSMUST00000022220 Map7d2A2AG50 781 aa12.89□□□□□ -0.35
Msh3-201ENSMUST00000022220 Frmd3Q8BHD4 595 aa12.89□□□□□ -0.35
Msh3-201ENSMUST00000022220 Klc3Q91W40 508 aa12.89□□□□□ -0.35
Msh3-201ENSMUST00000022220 Tmem132aQ922P8 1018 aa12.89□□□□□ -0.35
Msh3-201ENSMUST00000022220 Sh3bgrQ9WUZ7 214 aa12.89□□□□□ -0.35
Msh3-201ENSMUST00000022220 Plch2A2AP18 1501 aa12.89□□□□□ -0.35
Msh3-201ENSMUST00000022220 Ddit3P35639 168 aa12.89□□□□□ -0.35
Msh3-201ENSMUST00000022220 Ercc3P49135 783 aa12.89□□□□□ -0.35
Msh3-201ENSMUST00000022220 Adam1aQ60813 791 aa12.89□□□□□ -0.35
Msh3-201ENSMUST00000022220 Bicd2Q921C5 820 aa12.89□□□□□ -0.35
Msh3-201ENSMUST00000022220 Bicc1Q99MQ1 977 aaKnown RBP12.89□□□□□ -0.35
Msh3-201ENSMUST00000022220 Bag3Q9JLV1 577 aaKnown RBP12.89□□□□□ -0.35
Msh3-201ENSMUST00000022220 Arhgef1Q61210 920 aaKnown RBP12.88□□□□□ -0.35
Msh3-201ENSMUST00000022220 Zbtb3Q91X45 518 aa12.88□□□□□ -0.35
Msh3-201ENSMUST00000022220 Gdpd2Q9ESM6 539 aa12.88□□□□□ -0.35
Msh3-201ENSMUST00000022220 Dip2cE9PWR4 1557 aa12.88□□□□□ -0.35
Msh3-201ENSMUST00000022220 Pde4bB1AWC9 736 aa12.88□□□□□ -0.35
Msh3-201ENSMUST00000022220 Trim34bJ3QNR8 485 aa12.88□□□□□ -0.35
Msh3-201ENSMUST00000022220 Grm8P47743 908 aa12.88□□□□□ -0.35
Msh3-201ENSMUST00000022220 Hvcn1Q3U2S8 269 aa12.88□□□□□ -0.35
Msh3-201ENSMUST00000022220 Slf2Q6P9P0 1278 aa12.88□□□□□ -0.35
Msh3-201ENSMUST00000022220 Jmjd4Q8BFT6 427 aa12.88□□□□□ -0.35
Msh3-201ENSMUST00000022220 Kdm4aQ8BW72 1064 aa12.88□□□□□ -0.35
Msh3-201ENSMUST00000022220 Kdm4cQ8VCD7 1054 aa12.88□□□□□ -0.35
Msh3-201ENSMUST00000022220 Taf7Q9R1C0 341 aa12.88□□□□□ -0.35
Msh3-201ENSMUST00000022220 Znf521Q6KAS7 1311 aa12.88□□□□□ -0.35
Msh3-201ENSMUST00000022220 Pik3r4Q8VD65 1358 aa12.87□□□□□ -0.35
Msh3-201ENSMUST00000022220 IghaA0A0A6YXW6 389 aa12.87□□□□□ -0.35
Msh3-201ENSMUST00000022220 Atp8b2P98199 1209 aa12.87□□□□□ -0.35
Msh3-201ENSMUST00000022220 Ddx46Q569Z5 1032 aaKnown RBP12.87□□□□□ -0.35
Msh3-201ENSMUST00000022220 Sass6Q80UK7 654 aa12.87□□□□□ -0.35
Msh3-201ENSMUST00000022220 SympkQ80X82 1284 aa12.87□□□□□ -0.35
Msh3-201ENSMUST00000022220 Adcy5P84309 1262 aa12.87□□□□□ -0.35
Msh3-201ENSMUST00000022220 ShprhQ7TPQ3 1674 aa12.87□□□□□ -0.35
Msh3-201ENSMUST00000022220 Cct4P80315 539 aaKnown RBP12.87□□□□□ -0.35
Msh3-201ENSMUST00000022220 MpndQ3TV65 487 aa12.87□□□□□ -0.35
Msh3-201ENSMUST00000022220 NmiO35309 314 aa12.86□□□□□ -0.35
Msh3-201ENSMUST00000022220 Cavin2Q63918 418 aaKnown RBP12.86□□□□□ -0.35
Msh3-201ENSMUST00000022220 Pdia3P27773 505 aaKnown RBP12.86□□□□□ -0.35
Msh3-201ENSMUST00000022220 Ccp110Q7TSH4 1004 aa12.86□□□□□ -0.35
Msh3-201ENSMUST00000022220 Irgm2A0A140LIF8 407 aa12.86□□□□□ -0.35
Msh3-201ENSMUST00000022220 Cplx1P63040 134 aa12.86□□□□□ -0.35
Msh3-201ENSMUST00000022220 Gjb2Q00977 226 aa12.86□□□□□ -0.35
Msh3-201ENSMUST00000022220 Ankle2Q6P1H6 964 aa12.86□□□□□ -0.35
Msh3-201ENSMUST00000022220 Zfp251Q6PCX8 632 aa12.86□□□□□ -0.35
Msh3-201ENSMUST00000022220 Golim4Q8BXA1 655 aa12.86□□□□□ -0.35
Msh3-201ENSMUST00000022220 Ptcd1Q8C2E4 695 aaKnown RBP12.86□□□□□ -0.35
Msh3-201ENSMUST00000022220 Knl1Q66JQ7 1612 aa12.86□□□□□ -0.35
Msh3-201ENSMUST00000022220 Me1P06801 572 aa12.85□□□□□ -0.35
Msh3-201ENSMUST00000022220 EvcP57680 1005 aa12.85□□□□□ -0.35
Msh3-201ENSMUST00000022220 Spty2d1Q68FG3 682 aa12.85□□□□□ -0.35
Msh3-201ENSMUST00000022220 Ddx58Q6Q899 926 aa12.85□□□□□ -0.35
Msh3-201ENSMUST00000022220 Samm50Q8BGH2 469 aa12.85□□□□□ -0.35
Msh3-201ENSMUST00000022220 Eno4Q8C042 619 aa12.85□□□□□ -0.35
Msh3-201ENSMUST00000022220 Pdzd9Q9D9M4 266 aa12.85□□□□□ -0.35
Msh3-201ENSMUST00000022220 Hspa2P17156 633 aa12.85□□□□□ -0.35
Msh3-201ENSMUST00000022220 AnlnQ8K298 1121 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms