RNA–Protein interactions for RNA: ENSMUST00000020163.6

Nedd1-201, Transcript of Protein NEDD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nedd1, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1-201ENSMUST00000020163 Cep170bQ80U49 1574 aa11.9□□□□□ -0.5
Nedd1-201ENSMUST00000020163 Card6E9PWH2 1175 aa11.9□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Nol12Q8BG17 217 aa11.9□□□□□ -0.51
Nedd1-201ENSMUST00000020163 DpydQ8CHR6 1025 aa11.9□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Sf3a1Q8K4Z5 791 aaKnown RBP11.9□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Cabp2Q9JLK4 216 aa11.9□□□□□ -0.51
Nedd1-201ENSMUST00000020163 OvosQ3UU35 1456 aa11.89□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Spata31d1bE9QA57 1361 aa11.89□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Zscan29E9Q5B4 869 aa11.89□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Utp14aQ640M1 767 aaKnown RBP11.89□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Ulbp1Q8HWA3 334 aa11.89□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Vps33aQ9D2N9 598 aa11.89□□□□□ -0.51
Nedd1-201ENSMUST00000020163 4930548H24RikQ9D496 437 aa11.89□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Slx4ipQ9D7Y9 413 aa11.89□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Pmfbp1Q9WVQ0 1022 aa11.89□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Kcnj4P52189 445 aa11.89□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Tshz1Q5DTH5 1084 aa11.89□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Tshz3Q8CGV9 1081 aa11.89□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Hsp90b1P08113 802 aaKnown RBP11.89□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Hmox1P14901 289 aa11.89□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Nlrp3Q8R4B8 1033 aa11.89□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Creld2Q9CYA0 350 aa11.89□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Jakmip1Q8BVL9 626 aa11.88□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Nup88Q8CEC0 753 aaKnown RBP11.88□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Stk26Q99JT2 416 aa11.88□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Nphp1Q9QY53 687 aa11.88□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Gli2Q0VGT2 1544 aa11.88□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Brpf1B2RRD7 1212 aa11.88□□□□□ -0.51
Nedd1-201ENSMUST00000020163 CenpqQ9CPQ5 267 aa11.88□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Igbp1bQ9QZ29 343 aa11.88□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Abca14E9Q8F8 1683 aa11.87□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Sytl4Q9R0Q1 673 aa11.87□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Wdr33Q8K4P0 1330 aaKnown RBP11.87□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Kif1aP33173 1695 aa11.87□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Cdk19Q8BWD8 501 aa11.87□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Hmgn5Q9JL35 406 aa11.87□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Ccz1Q8C1Y8 480 aa11.87□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Rsph6aQ8CDR2 708 aa11.87□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Tet3Q8BG87 1668 aa11.87□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Mmp8O70138 465 aa11.86□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Rad50P70388 1312 aa11.86□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Kansl3A2RSY1 903 aaKnown RBP11.86□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Cd22P35329 862 aa11.86□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Smc3Q9CW03 1217 aaKnown RBP11.86□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Map7d2A2AG50 781 aa11.86□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Gnai2P08752 355 aaKnown RBP11.86□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Ecm2Q5FW85 670 aa11.86□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Bmp2kQ91Z96 1138 aa11.86□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Rufy3Q9D394 469 aa11.86□□□□□ -0.51
Nedd1-201ENSMUST00000020163 NpatQ8BMA5 1420 aa11.85□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Hmx1O70218 332 aa11.85□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Kif2aP28740 705 aa11.85□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Cers3Q1A3B0 383 aa11.85□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Mcm10Q0VBD2 885 aa11.85□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Otud6bQ8K2H2 294 aa11.85□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Zfp597E9Q6S0 419 aa11.85□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Syt1P46096 421 aa11.85□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Tyro3P55144 880 aa11.85□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Srgap3Q812A2 1099 aa11.85□□□□□ -0.51
Nedd1-201ENSMUST00000020163 AatfQ9JKX4 526 aaKnown RBP11.85□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Gjb2Q00977 226 aa11.84□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Tlcd1Q99JT6 247 aa11.84□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Nfe2l3Q9WTM4 660 aa11.84□□□□□ -0.51
Nedd1-201ENSMUST00000020163 1700006A11RikB9EHI3 544 aa11.84□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Bach1P97302 739 aa11.84□□□□□ -0.51
Nedd1-201ENSMUST00000020163 EappQ5BU09 281 aa11.84□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Tshz2Q68FE9 1030 aa11.84□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Ppp1r42Q8R1Z4 357 aa11.84□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Nphp3Q7TNH6 1325 aa11.84□□□□□ -0.51
Nedd1-201ENSMUST00000020163 PplQ9R269 1755 aa11.84□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Dixdc1Q80Y83 711 aa11.83□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Pof1bQ8K4L4 587 aa11.83□□□□□ -0.51
Nedd1-201ENSMUST00000020163 Birc3O08863 600 aa11.83□□□□□ -0.52
Nedd1-201ENSMUST00000020163 Sox12Q04890 314 aa11.83□□□□□ -0.52
Nedd1-201ENSMUST00000020163 Prdm4Q80V63 803 aa11.83□□□□□ -0.52
Nedd1-201ENSMUST00000020163 Nrbp1Q99J45 535 aa11.83□□□□□ -0.52
Nedd1-201ENSMUST00000020163 CemipQ8BI06 1361 aa11.83□□□□□ -0.52
Nedd1-201ENSMUST00000020163 Atp8b2P98199 1209 aa11.83□□□□□ -0.52
Nedd1-201ENSMUST00000020163 Mrvi1Q9WUX5 899 aaKnown RBP11.83□□□□□ -0.52
Nedd1-201ENSMUST00000020163 Adamts7Q68SA9 1657 aa11.83□□□□□ -0.52
Nedd1-201ENSMUST00000020163 Capn2O08529 700 aa11.82□□□□□ -0.52
Nedd1-201ENSMUST00000020163 Trap1aP19473 224 aa11.82□□□□□ -0.52
Nedd1-201ENSMUST00000020163 Cep135Q6P5D4 1140 aa11.82□□□□□ -0.52
Nedd1-201ENSMUST00000020163 Unc5clQ6R653 518 aa11.82□□□□□ -0.52
Nedd1-201ENSMUST00000020163 Add2Q9QYB8 725 aa11.82□□□□□ -0.52
Nedd1-201ENSMUST00000020163 Map3k19E9Q3S4 1311 aa11.82□□□□□ -0.52
Nedd1-201ENSMUST00000020163 Tpx2A2APB8 745 aaKnown RBP11.82□□□□□ -0.52
Nedd1-201ENSMUST00000020163 Mcmdc2E9Q956 681 aa11.82□□□□□ -0.52
Nedd1-201ENSMUST00000020163 Evi5lH3BKQ3 813 aa11.82□□□□□ -0.52
Nedd1-201ENSMUST00000020163 Phf20l1Q8CCJ9 1013 aa11.82□□□□□ -0.52
Nedd1-201ENSMUST00000020163 Atp8b3Q6UQ17 1335 aa11.82□□□□□ -0.52
Nedd1-201ENSMUST00000020163 Pcdhgc5Q91XW9 944 aa11.82□□□□□ -0.52
Nedd1-201ENSMUST00000020163 Zbtb22Q9Z0G7 638 aa11.82□□□□□ -0.52
Nedd1-201ENSMUST00000020163 Casz1Q9CWL2 1761 aa11.82□□□□□ -0.52
Nedd1-201ENSMUST00000020163 TfrcQ62351 763 aaKnown RBP11.81□□□□□ -0.52
Nedd1-201ENSMUST00000020163 NaspQ99MD9 773 aaKnown RBP11.81□□□□□ -0.52
Nedd1-201ENSMUST00000020163 HypkQ9CR41 129 aa11.81□□□□□ -0.52
Nedd1-201ENSMUST00000020163 Mlh1Q9JK91 760 aa11.81□□□□□ -0.52
Nedd1-201ENSMUST00000020163 Prrc2bQ7TPM1 1486 aaKnown RBP11.81□□□□□ -0.52
Nedd1-201ENSMUST00000020163 Cyb5rlB1AS42 316 aa11.81□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms