RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Kif4P33174 1231 aa13.73□□□□□ -0.21
Vps54-201ENSMUST00000006221 Pa2g4P50580 394 aaKnown RBP13.73□□□□□ -0.21
Vps54-201ENSMUST00000006221 Ccdc7Q9D541 371 aa13.73□□□□□ -0.21
Vps54-201ENSMUST00000006221 Arfgef2A2A5R2 1792 aa13.73□□□□□ -0.21
Vps54-201ENSMUST00000006221 Mon2Q80TL7 1715 aa13.73□□□□□ -0.21
Vps54-201ENSMUST00000006221 C5P06684 1680 aa13.73□□□□□ -0.21
Vps54-201ENSMUST00000006221 Als2Q920R0 1651 aa13.73□□□□□ -0.21
Vps54-201ENSMUST00000006221 Cnksr1A2A9K7 700 aa13.73□□□□□ -0.21
Vps54-201ENSMUST00000006221 Chd1lQ9CXF7 900 aa13.73□□□□□ -0.21
Vps54-201ENSMUST00000006221 Clcn1Q64347 994 aa13.72□□□□□ -0.21
Vps54-201ENSMUST00000006221 Brf1Q8CFK2 676 aa13.72□□□□□ -0.21
Vps54-201ENSMUST00000006221 Zfp804bA0A0G2JGH6 1343 aa13.72□□□□□ -0.21
Vps54-201ENSMUST00000006221 Rad50P70388 1312 aa13.72□□□□□ -0.21
Vps54-201ENSMUST00000006221 Bms1Q6PGF5 1284 aaKnown RBP13.72□□□□□ -0.21
Vps54-201ENSMUST00000006221 Mphosph10Q810V0 681 aaKnown RBP13.72□□□□□ -0.21
Vps54-201ENSMUST00000006221 Rufy3Q9D394 469 aa13.72□□□□□ -0.21
Vps54-201ENSMUST00000006221 Gjb2Q00977 226 aa13.71□□□□□ -0.21
Vps54-201ENSMUST00000006221 DpydQ8CHR6 1025 aa13.71□□□□□ -0.21
Vps54-201ENSMUST00000006221 Rbm10Q99KG3 930 aaKnown RBP13.71□□□□□ -0.21
Vps54-201ENSMUST00000006221 Atp6v1dP57746 247 aa13.71□□□□□ -0.21
Vps54-201ENSMUST00000006221 EappQ5BU09 281 aa13.71□□□□□ -0.21
Vps54-201ENSMUST00000006221 Edc3Q8K2D3 508 aaKnown RBP13.71□□□□□ -0.21
Vps54-201ENSMUST00000006221 Noc3lQ8VI84 807 aaKnown RBP13.71□□□□□ -0.21
Vps54-201ENSMUST00000006221 KinQ8K339 391 aa13.71□□□□□ -0.22
Vps54-201ENSMUST00000006221 Adcy9P51830 1353 aa13.71□□□□□ -0.22
Vps54-201ENSMUST00000006221 Pdia4P08003 638 aaKnown RBP13.71□□□□□ -0.22
Vps54-201ENSMUST00000006221 Babam1Q3UI43 333 aa13.71□□□□□ -0.22
Vps54-201ENSMUST00000006221 Mknk2Q8CDB0 459 aa13.71□□□□□ -0.22
Vps54-201ENSMUST00000006221 Pnma3Q8JZW8 466 aa13.71□□□□□ -0.22
Vps54-201ENSMUST00000006221 Fez1Q8K0X8 392 aa13.7□□□□□ -0.22
Vps54-201ENSMUST00000006221 Ripk4Q9ERK0 786 aa13.7□□□□□ -0.22
Vps54-201ENSMUST00000006221 Gsdma3Q5Y4Y6 464 aa13.7□□□□□ -0.22
Vps54-201ENSMUST00000006221 Kdm4aQ8BW72 1064 aa13.7□□□□□ -0.22
Vps54-201ENSMUST00000006221 Taok2Q6ZQ29 1240 aa13.7□□□□□ -0.22
Vps54-201ENSMUST00000006221 DmtnQ9WV69 405 aa13.7□□□□□ -0.22
Vps54-201ENSMUST00000006221 Ccar2Q8VDP4 922 aaKnown RBP13.69□□□□□ -0.22
Vps54-201ENSMUST00000006221 Brpf1B2RRD7 1212 aa13.69□□□□□ -0.22
Vps54-201ENSMUST00000006221 Btbd11Q6GQW0 1109 aa13.69□□□□□ -0.22
Vps54-201ENSMUST00000006221 Strn4P58404 760 aa13.69□□□□□ -0.22
Vps54-201ENSMUST00000006221 TatQ8QZR1 454 aa13.69□□□□□ -0.22
Vps54-201ENSMUST00000006221 Amotl1Q9D4H4 968 aa13.69□□□□□ -0.22
Vps54-201ENSMUST00000006221 Ano8Q6PB70 1060 aa13.68□□□□□ -0.22
Vps54-201ENSMUST00000006221 Ints3Q7TPD0 1041 aaKnown RBP13.68□□□□□ -0.22
Vps54-201ENSMUST00000006221 Echdc1Q9D9V3 322 aa13.68□□□□□ -0.22
Vps54-201ENSMUST00000006221 Dlg5E9Q9R9 1921 aa13.68□□□□□ -0.22
Vps54-201ENSMUST00000006221 Smarce1O54941 411 aaKnown RBP13.68□□□□□ -0.22
Vps54-201ENSMUST00000006221 Fam228bQ497Q6 232 aa13.68□□□□□ -0.22
Vps54-201ENSMUST00000006221 Gzf1Q4VBD9 706 aa13.68□□□□□ -0.22
Vps54-201ENSMUST00000006221 Tceal9Q9DD24 104 aa13.68□□□□□ -0.22
Vps54-201ENSMUST00000006221 Map3k2Q61083 619 aa13.68□□□□□ -0.22
Vps54-201ENSMUST00000006221 Cdca7lQ922M5 438 aa13.68□□□□□ -0.22
Vps54-201ENSMUST00000006221 Dnajc10Q9DC23 793 aa13.68□□□□□ -0.22
Vps54-201ENSMUST00000006221 Nup153E9Q3G8 1462 aaKnown RBP13.68□□□□□ -0.22
Vps54-201ENSMUST00000006221 Cct4P80315 539 aaKnown RBP13.68□□□□□ -0.22
Vps54-201ENSMUST00000006221 VgfQ0VGU4 617 aa13.68□□□□□ -0.22
Vps54-201ENSMUST00000006221 Ush1cQ9ES64 910 aa13.68□□□□□ -0.22
Vps54-201ENSMUST00000006221 Ddx19aQ61655 478 aaKnown RBP13.67□□□□□ -0.22
Vps54-201ENSMUST00000006221 Jarid2Q62315 1234 aa13.67□□□□□ -0.22
Vps54-201ENSMUST00000006221 Add2Q9QYB8 725 aa13.67□□□□□ -0.22
Vps54-201ENSMUST00000006221 Ets1P27577 440 aa13.67□□□□□ -0.22
Vps54-201ENSMUST00000006221 Olfml1Q8BSH2 233 aa13.67□□□□□ -0.22
Vps54-201ENSMUST00000006221 Zbtb22Q9Z0G7 638 aa13.66□□□□□ -0.22
Vps54-201ENSMUST00000006221 Samm50Q8BGH2 469 aa13.66□□□□□ -0.22
Vps54-201ENSMUST00000006221 Taf5lQ91WQ5 589 aa13.66□□□□□ -0.22
Vps54-201ENSMUST00000006221 Syt1P46096 421 aa13.66□□□□□ -0.22
Vps54-201ENSMUST00000006221 Pcmtd1P59913 357 aa13.66□□□□□ -0.22
Vps54-201ENSMUST00000006221 Top1mtQ8R4U6 593 aa13.66□□□□□ -0.22
Vps54-201ENSMUST00000006221 Col1a2Q01149 1372 aa13.66□□□□□ -0.22
Vps54-201ENSMUST00000006221 Igfbp6P47880 238 aa13.66□□□□□ -0.22
Vps54-201ENSMUST00000006221 Tti2Q8BGV4 512 aa13.66□□□□□ -0.22
Vps54-201ENSMUST00000006221 Atg3Q9CPX6 314 aa13.66□□□□□ -0.22
Vps54-201ENSMUST00000006221 Stx6Q9JKK1 255 aa13.66□□□□□ -0.22
Vps54-201ENSMUST00000006221 Bach1P97302 739 aa13.65□□□□□ -0.22
Vps54-201ENSMUST00000006221 Ifit2Q64112 472 aa13.65□□□□□ -0.22
Vps54-201ENSMUST00000006221 Ccdc155Q80VJ8 648 aa13.65□□□□□ -0.22
Vps54-201ENSMUST00000006221 Tceanc2Q8R2M0 207 aa13.65□□□□□ -0.22
Vps54-201ENSMUST00000006221 Glipr1l2Q9CQ35 332 aa13.65□□□□□ -0.22
Vps54-201ENSMUST00000006221 Usp48Q3V0C5 1052 aa13.65□□□□□ -0.22
Vps54-201ENSMUST00000006221 Zbtb3Q91X45 518 aa13.65□□□□□ -0.22
Vps54-201ENSMUST00000006221 Becn1O88597 448 aa13.64□□□□□ -0.23
Vps54-201ENSMUST00000006221 Ppp1r37Q8BKR5 712 aa13.64□□□□□ -0.23
Vps54-201ENSMUST00000006221 Mrpl50Q8VDT9 159 aaKnown RBP13.64□□□□□ -0.23
Vps54-201ENSMUST00000006221 Ppfia1B2RXQ2 1266 aa13.64□□□□□ -0.23
Vps54-201ENSMUST00000006221 Pkp1P97350 728 aaKnown RBP13.64□□□□□ -0.23
Vps54-201ENSMUST00000006221 Rad17Q6NXW6 688 aa13.64□□□□□ -0.23
Vps54-201ENSMUST00000006221 GckrQ91X44 587 aa13.64□□□□□ -0.23
Vps54-201ENSMUST00000006221 Smc3Q9CW03 1217 aaKnown RBP13.64□□□□□ -0.23
Vps54-201ENSMUST00000006221 Il1rapl2Q9ERS6 686 aa13.64□□□□□ -0.23
Vps54-201ENSMUST00000006221 Mcm3P25206 812 aaKnown RBP13.63□□□□□ -0.23
Vps54-201ENSMUST00000006221 Tpm2P58774 284 aa13.63□□□□□ -0.23
Vps54-201ENSMUST00000006221 Wdr93Q402B2 695 aa13.63□□□□□ -0.23
Vps54-201ENSMUST00000006221 Pdcl2Q78Y63 240 aa13.63□□□□□ -0.23
Vps54-201ENSMUST00000006221 Tsr2Q8C8T8 191 aa13.63□□□□□ -0.23
Vps54-201ENSMUST00000006221 Hspa2P17156 633 aa13.63□□□□□ -0.23
Vps54-201ENSMUST00000006221 4930504O13RikQ8C5Z9 145 aa13.63□□□□□ -0.23
Vps54-201ENSMUST00000006221 Abcc4E9Q236 1325 aa13.63□□□□□ -0.23
Vps54-201ENSMUST00000006221 Aox2Q5SGK3 1345 aa13.63□□□□□ -0.23
Vps54-201ENSMUST00000006221 Mindy4Q3UQI9 744 aa13.63□□□□□ -0.23
Vps54-201ENSMUST00000006221 C3P01027 1663 aa13.63□□□□□ -0.23
Vps54-201ENSMUST00000006221 Cd22P35329 862 aa13.63□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms