RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 FZD4Q9ULV1 537 aa10.7□□□□□ -0.7
ZNF558-207ENST00000601372 CLEC4AQ9UMR7 237 aa10.7□□□□□ -0.7
ZNF558-207ENST00000601372 SMAD6O43541 496 aaKnown RBP10.7□□□□□ -0.7
ZNF558-207ENST00000601372 SCAPQ12770 1279 aa10.7□□□□□ -0.7
ZNF558-207ENST00000601372 TAF13Q15543 124 aa10.7□□□□□ -0.7
ZNF558-207ENST00000601372 ZBED5Q49AG3 693 aa10.7□□□□□ -0.7
ZNF558-207ENST00000601372 PDCD4Q53EL6 469 aaKnown RBP10.7□□□□□ -0.7
ZNF558-207ENST00000601372 NANOGP8Q6NSW7 305 aa10.7□□□□□ -0.7
ZNF558-207ENST00000601372 ERICH5Q6P6B1 374 aa10.7□□□□□ -0.7
ZNF558-207ENST00000601372 UBE2J2Q8N2K1 259 aa10.7□□□□□ -0.7
ZNF558-207ENST00000601372 NXPE1Q8N323 547 aa10.7□□□□□ -0.7
ZNF558-207ENST00000601372 DPP10Q8N608 796 aa10.7□□□□□ -0.7
ZNF558-207ENST00000601372 OR9A1PQ8NGU1 263 aa10.7□□□□□ -0.7
ZNF558-207ENST00000601372 CFHR5Q9BXR6 569 aa10.7□□□□□ -0.7
ZNF558-207ENST00000601372 NANOGQ9H9S0 305 aa10.7□□□□□ -0.7
ZNF558-207ENST00000601372 TRIM39Q9HCM9 518 aa10.7□□□□□ -0.7
ZNF558-207ENST00000601372 PCDHGA7Q9Y5G6 932 aa10.7□□□□□ -0.7
ZNF558-207ENST00000601372 COL11A1P12107 1806 aaPredicted RBP10.7□□□□□ -0.7
ZNF558-207ENST00000601372 CCDC182A6NF36 153 aa10.7□□□□□ -0.7
ZNF558-207ENST00000601372 B4GALT2O60909 372 aa10.7□□□□□ -0.7
ZNF558-207ENST00000601372 VSX2P58304 361 aaPredicted RBP10.7□□□□□ -0.7
ZNF558-207ENST00000601372 SRP54P61011 504 aaKnown RBP10.7□□□□□ -0.7
ZNF558-207ENST00000601372 HHEXQ03014 270 aa10.7□□□□□ -0.7
ZNF558-207ENST00000601372 HYAL1Q12794 435 aa10.7□□□□□ -0.7
ZNF558-207ENST00000601372 GK3PQ14409 553 aa10.7□□□□□ -0.7
ZNF558-207ENST00000601372 DNASE1L2Q92874 299 aa10.7□□□□□ -0.7
ZNF558-207ENST00000601372 SLC22A12Q96S37 553 aa10.7□□□□□ -0.7
ZNF558-207ENST00000601372 DUSP26Q9BV47 211 aa10.7□□□□□ -0.7
ZNF558-207ENST00000601372 PCDHGB3Q9Y5G1 929 aa10.7□□□□□ -0.7
ZNF558-207ENST00000601372 HOXA9P31269 272 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 SHMT2P34897 504 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 FOXA1P55317 472 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 SLC9A5Q14940 896 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 OGFRL1Q5TC84 451 aaPredicted RBP10.69□□□□□ -0.7
ZNF558-207ENST00000601372 RELTQ969Z4 430 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 CHFRQ96EP1 664 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 MSANTD3Q96H12 275 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 LRCH3Q96II8 777 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 ZNF607Q96SK3 696 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 CTPS2Q9NRF8 586 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 ITGB7P26010 798 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 HOXD9P28356 352 aaPredicted RBP10.69□□□□□ -0.7
ZNF558-207ENST00000601372 RPP38P78345 283 aaKnown RBP10.69□□□□□ -0.7
ZNF558-207ENST00000601372 NPTX1Q15818 432 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 TIMM50Q3ZCQ8 353 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 DENND5AQ6IQ26 1287 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 AKAP14Q86UN6 197 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 SMPDL3AQ92484 453 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 WDR83Q9BRX9 315 aaKnown RBP10.69□□□□□ -0.7
ZNF558-207ENST00000601372 SSR3Q9UNL2 185 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 PCDHGA11Q9Y5H2 935 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 OR5K4A6NMS3 321 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 AIREO43918 545 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 AP2A2O94973 939 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 SUOXP51687 545 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 COL9A2Q14055 689 aaPredicted RBP10.69□□□□□ -0.7
ZNF558-207ENST00000601372 KIAA0895LQ68EN5 471 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 ASB16Q96NS5 453 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 SEC14L3Q9UDX4 400 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 TRPM7Q96QT4 1865 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 ERI3O43414 337 aaKnown RBP10.69□□□□□ -0.7
ZNF558-207ENST00000601372 TMCC2O75069 709 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 IL12RB1P42701 662 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 ASMTP46597 345 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 SEMA3AQ14563 771 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 ABRAXAS2Q15018 415 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 ZNF534Q76KX8 674 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 ADAMTS19Q8TE59 1207 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 APOOQ9BUR5 198 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 SLC6A17Q9H1V8 727 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 EBF1Q9UH73 591 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 MKL2Q9ULH7 1088 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 TMA7Q9Y2S6 64 aaKnown RBP10.69□□□□□ -0.7
ZNF558-207ENST00000601372 TAF4O00268 1085 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 BCAT2O15382 392 aaPredicted RBP10.69□□□□□ -0.7
ZNF558-207ENST00000601372 HLA-FP30511 346 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 STT3AP46977 705 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 TNFAIP8L2Q6P589 184 aaPredicted RBP10.69□□□□□ -0.7
ZNF558-207ENST00000601372 SMPDL3BQ92485 455 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 PTERQ96BW5 349 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 ISOC1Q96CN7 298 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 AURKBQ96GD4 344 aaPredicted RBP10.69□□□□□ -0.7
ZNF558-207ENST00000601372 GFM1Q96RP9 751 aaKnown RBP10.69□□□□□ -0.7
ZNF558-207ENST00000601372 KCNH6Q9H252 994 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 PTGFRNQ9P2B2 879 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 DOCK5Q9H7D0 1870 aa10.69□□□□□ -0.7
ZNF558-207ENST00000601372 A6NCN8 305 aa10.68□□□□□ -0.7
ZNF558-207ENST00000601372 DNAJB1P25685 340 aa10.68□□□□□ -0.7
ZNF558-207ENST00000601372 RAB41Q5JT25 222 aa10.68□□□□□ -0.7
ZNF558-207ENST00000601372 OXR1Q8N573 874 aa10.68□□□□□ -0.7
ZNF558-207ENST00000601372 EID2Q8N6I1 236 aa10.68□□□□□ -0.7
ZNF558-207ENST00000601372 TRPV3Q8NET8 790 aa10.68□□□□□ -0.7
ZNF558-207ENST00000601372 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.68□□□□□ -0.7
ZNF558-207ENST00000601372 P2RY2P41231 377 aa10.68□□□□□ -0.7
ZNF558-207ENST00000601372 DPP6P42658 865 aa10.68□□□□□ -0.7
ZNF558-207ENST00000601372 RAPSNQ13702 412 aa10.68□□□□□ -0.7
ZNF558-207ENST00000601372 SCARB2Q14108 478 aa10.68□□□□□ -0.7
ZNF558-207ENST00000601372 KANK2Q63ZY3 851 aa10.68□□□□□ -0.7
ZNF558-207ENST00000601372 RSPO2Q6UXX9 243 aaPredicted RBP10.68□□□□□ -0.7
ZNF558-207ENST00000601372 FAM110BQ8TC76 370 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms