RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 MPP7Q5T2T1 576 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 PLPP4Q5VZY2 271 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 PSRC1Q6PGN9 363 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 RPS27LQ71UM5 84 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 COMTD1Q86VU5 262 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 GALNT12Q8IXK2 581 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 FSTL5Q8N475 847 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 CELF2-AS1Q8N7Q2 184 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 SIMC1Q8NDZ2 872 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 OR6Q1Q8NGQ2 317 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 PIK3R3Q92569 461 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 FKBP10Q96AY3 582 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 NXNL1Q96CM4 212 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 TCEAL4Q96EI5 215 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 UBXN10Q96LJ8 280 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 REXO4Q9GZR2 422 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 SMG9Q9H0W8 520 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 SPACA1Q9HBV2 294 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 TMEM181Q9P2C4 612 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 FCF1Q9Y324 198 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 PCDHGC4Q9Y5F7 938 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 ANKRD36A6QL64 1941 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 TRAV19A0A0A6YYK7 116 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 FAM221AA4D161 298 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 LINC01553A4QN01 128 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 EVPLLA8MZ36 301 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 C5orf67F2Z3F1 127 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 K7ERQ8 282 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 H2AFYO75367 372 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 SLITRK5O94991 958 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 ADH1CP00326 375 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 LDLRP01130 860 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 PRSS56P0CW18 603 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 JUNBP17275 347 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 TGFBR1P36897 503 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 SLC15A1P46059 708 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 HOXA1P49639 335 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 TSPAN5P62079 268 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 NCS1P62166 190 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 PTPRRQ15256 657 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 ZMYND11Q15326 602 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 TAF1AQ15573 450 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 HIST2H2ACQ16777 129 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 KIF19Q2TAC6 998 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 ADPRMQ3LIE5 342 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 HECTD2Q5U5R9 776 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 GARNL3Q5VVW2 1013 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 STEAP3Q658P3 488 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 PYHIN1Q6K0P9 492 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 NLRC3Q7RTR2 1065 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 LYSMD2Q8IV50 215 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 FAM26EQ8N5C1 309 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 FAM83FQ8NEG4 500 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 YTHDF1Q9BYJ9 559 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 ASAH2Q9NR71 780 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 INTS6Q9UL03 887 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 RUVBL1Q9Y265 456 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 NME4O00746 187 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 GPR171O14626 319 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 CKMP06732 381 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 COX5BP10606 129 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 OGNP20774 298 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 FDXRP22570 491 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 CRHBPP24387 322 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 IRS1P35568 1242 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 SUOXP51687 545 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 LMAN2Q12907 356 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 CDH18Q13634 790 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 TEAD4Q15561 434 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 ATAD3CQ5T2N8 411 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 C1orf185Q5T7R7 199 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 ERICH5Q6P6B1 374 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 C11orf88Q6PI97 169 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 SPRED1Q7Z699 444 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 PLD3Q8IV08 490 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 LNX2Q8N448 690 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 FIBINQ8TAL6 211 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 HMGCLL1Q8TB92 370 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 HEXDCQ8WVB3 486 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 POF1BQ8WVV4 589 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 DUS3LQ96G46 650 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 CDKN2AIPNLQ96HQ2 116 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 RNF145Q96MT1 663 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 ZNF578Q96N58 590 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 CCM2Q9BSQ5 444 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 SLC25A23Q9BV35 468 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 BBS2Q9BXC9 721 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 XPR1Q9UBH6 696 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 LSM7Q9UK45 103 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 SLC6A14Q9UN76 642 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 ZNF106Q9H2Y7 1883 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 SCN8AQ9UQD0 1980 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 ATG2AQ2TAZ0 1938 aa7.72□□□□□ -1.17
PDLIM5-221ENST00000542407 SERTM1A2A2V5 107 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 ANKRD66B4E2M5 251 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 CD3EAPO15446 510 aaKnown RBP7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 SMAD6O43541 496 aaKnown RBP7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 TLL1O43897 1013 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 DLX3O60479 287 aa7.71□□□□□ -1.17
PDLIM5-221ENST00000542407 HBQ1P09105 142 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms