RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 SHDQ96IW2 340 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 PRMT6Q96LA8 375 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-218ENST00000541615 ADAD1Q96M93 576 aaKnown RBP5.03□□□□□ -1.6
SNHG1-218ENST00000541615 WDFY2Q96P53 400 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 CASD1Q96PB1 797 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 FAM129BQ96TA1 746 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 SLC38A3Q99624 504 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 RAD9AQ99638 391 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 AGPAT1Q99943 283 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 MAPKAP1Q9BPZ7 522 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 FAM83CQ9BQN1 747 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 PCGF1Q9BSM1 259 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 YIPF4Q9BSR8 244 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 SOX7Q9BT81 388 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 DPH7Q9BTV6 452 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 TOLLIPQ9H0E2 274 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 DUSP15Q9H1R2 295 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-218ENST00000541615 SOX17Q9H6I2 414 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-218ENST00000541615 ARMT1Q9H993 441 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 MKNK2Q9HBH9 465 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 ERVK-5Q9HDB9 667 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 ADAP2Q9NPF8 381 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 AGPAT4Q9NRZ5 378 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 TBC1D13Q9NVG8 400 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 TEX10Q9NXF1 929 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-218ENST00000541615 TAS2R3Q9NYW6 316 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 NLGN3Q9NZ94 848 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 FEM1BQ9UK73 627 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 STAP1Q9ULZ2 295 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 PCDHA6Q9UN73 950 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 ADAMTS5Q9UNA0 930 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 KCTD3Q9Y597 815 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 PCDHA8Q9Y5H6 950 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 PUS1Q9Y606 427 aaKnown RBP eCLIP5.03□□□□□ -1.6
SNHG1-218ENST00000541615 ALG6Q9Y672 507 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 MAP3K4Q9Y6R4 1608 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 NWD1Q149M9 1564 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 MED1Q15648 1581 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-218ENST00000541615 VWDEQ8N2E2 1590 aa5.03□□□□□ -1.6
SNHG1-218ENST00000541615 ADGRF5Q8IZF2 1346 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 CNTNAP4Q9C0A0 1308 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 LMTK3Q96Q04 1460 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 MYH4Q9Y623 1939 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-218ENST00000541615 LOC100996750A0A140TA64 210 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 A0A1B0GVC2 190 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 TRIM49BA6NDI0 452 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 METTL21EPA6NDL7 271 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 WASHC1A8K0Z3 465 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 B4DXG7 233 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 PTGES3LE9PB15 166 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 E9PI62 339 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 MKRN2OSH3BPM6 223 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 H3BQ06 376 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-218ENST00000541615 SOCS2O14508 198 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 IMPA2O14732 288 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 PRMT5O14744 637 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-218ENST00000541615 MID1O15344 667 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 PRODHO43272 600 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 KLRC4O43908 158 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 PCDHGA12O60330 932 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 GRIN3BO60391 1043 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 ERN1O75460 977 aaKnown RBP5.02□□□□□ -1.61
SNHG1-218ENST00000541615 CREG1O75629 220 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 RPP40O75818 363 aaKnown RBP5.02□□□□□ -1.61
SNHG1-218ENST00000541615 SC5DO75845 299 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 GATBO75879 557 aaKnown RBP5.02□□□□□ -1.61
SNHG1-218ENST00000541615 GSRP00390 522 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 CSTAP01040 98 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 IFNA17P01571 189 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 APOC3P02656 99 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 NR3C1P04150 777 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 MMP10P09238 476 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 ATXN1LP0C7T5 689 aaKnown RBP5.02□□□□□ -1.61
SNHG1-218ENST00000541615 FGFR1P11362 822 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 G6PDP11413 515 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 PEPDP12955 493 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 TSPAN8P19075 237 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 PCMT1P22061 227 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 ITGA3P26006 1051 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 TEAD1P28347 426 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 S100A2P29034 98 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 DDTP30046 118 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 S100A11P31949 105 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 RYKP34925 604 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 THBS4P35443 961 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 CDKN2CP42773 168 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 NRIP1P48552 1158 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 SLC1A6P48664 564 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 IDH3AP50213 366 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 XKP51811 444 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 CTSWP56202 376 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 SOX8P57073 446 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 GMFBP60983 142 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 ARF6P62330 175 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 RAP1AP62834 184 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 GPC5P78333 572 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 SLC7A9P82251 487 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 VLDLRP98155 873 aa5.02□□□□□ -1.61
SNHG1-218ENST00000541615 SEMG2Q02383 582 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms