RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 ZFP1Q6P2D0 407 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.05□□□□□ -1.12
CHD4-208ENST00000540960 RINLQ6ZS11 566 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 TRIM46Q7Z4K8 759 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 SYVN1Q86TM6 617 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 LRRTM4Q86VH4 590 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 AMZ2Q86W34 360 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 SNX32Q86XE0 403 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 PRIMA1Q86XR5 153 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 TRAPPC5Q8IUR0 188 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 SLC35F3Q8IY50 421 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 ULK2Q8IYT8 1036 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 FBXW8Q8N3Y1 598 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 RASGEF1AQ8N9B8 481 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 SNX31Q8N9S9 440 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 PPFIBP2Q8ND30 876 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 FAM13CQ8NE31 585 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 OR13H1Q8NG92 308 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 DLG3Q92796 817 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 KLK6Q92876 244 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 FAM131CQ96AQ9 280 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 RAD51AP1Q96B01 352 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 SH3GL1Q99961 368 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 HAUS8Q9BT25 410 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 TEX101Q9BY14 249 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 MFRPQ9BY79 579 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 SHCBP1LQ9BZQ2 653 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 MUC13Q9H3R2 512 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 EHD1Q9H4M9 534 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 WDR26Q9H7D7 661 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 ASIC5Q9NY37 505 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 SARDHQ9UL12 918 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 PDE10AQ9Y233 779 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 FIS1Q9Y3D6 152 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 PCDHGA11Q9Y5H2 935 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 HEBP2Q9Y5Z4 205 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 KCNMB2Q9Y691 235 aa8.05□□□□□ -1.12
CHD4-208ENST00000540960 LOC100653049A0A140TA62 436 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 FAM234BA2RU67 622 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 D6RAR5 112 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 STMND1H3BQB6 276 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 AIM2O14862 343 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 CFLARO15519 480 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 PLRG1O43660 514 aaKnown RBP8.04□□□□□ -1.12
CHD4-208ENST00000540960 PRICKLE3O43900 615 aaPredicted RBP8.04□□□□□ -1.12
CHD4-208ENST00000540960 PRMT3O60678 531 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 SLC22A3O75751 556 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 POP7O75817 140 aaKnown RBP8.04□□□□□ -1.12
CHD4-208ENST00000540960 KRT34O76011 436 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 RSL1D1O76021 490 aaKnown RBP8.04□□□□□ -1.12
CHD4-208ENST00000540960 CAPN1P07384 714 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 PRR35P0CG20 571 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 CCL4P13236 92 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 GNAZP19086 355 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 PRPH2P23942 346 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 HTR1BP28222 390 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 NDUFS1P28331 727 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 CCKBRP32239 447 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 CASP2P42575 452 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 HSPA7P48741 367 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 AGTR2P50052 363 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 NUDT2P50583 147 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 HK3P52790 923 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 PGGT1BP53609 377 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 CLNS1AP54105 237 aaKnown RBP8.04□□□□□ -1.12
CHD4-208ENST00000540960 CLDN2P57739 230 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 ACTR3P61158 418 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 CTBSQ01459 385 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 IRF8Q02556 426 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 TBL3Q12788 808 aaKnown RBP8.04□□□□□ -1.12
CHD4-208ENST00000540960 CSTF3Q12996 717 aaKnown RBP8.04□□□□□ -1.12
CHD4-208ENST00000540960 PTK2BQ14289 1009 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 NR6A1Q15406 480 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 SPRED3Q2MJR0 410 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 DPY19L1Q2PZI1 675 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 CLEC6AQ6EIG7 209 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 DET1Q7L5Y6 550 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 GDF7Q7Z4P5 450 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 ADGRG6Q86SQ4 1221 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 RASGRP3Q8IV61 690 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 DEFB107AQ8IZN7 70 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 DSELQ8IZU8 1212 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 TBC1D19Q8N5T2 526 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 ENDOVQ8N8Q3 282 aaKnown RBP8.04□□□□□ -1.12
CHD4-208ENST00000540960 CDYL2Q8N8U2 506 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 L3MBTL4Q8NA19 623 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 GOLM1Q8NBJ4 401 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 TMEM145Q8NBT3 493 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 TNIP2Q8NFZ5 429 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 OR4F6Q8NGB9 312 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 COX14Q96I36 57 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 SLC45A3Q96JT2 553 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 GFM1Q96RP9 751 aaKnown RBP8.04□□□□□ -1.12
CHD4-208ENST00000540960 TIMM29Q9BSF4 260 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 EFHD1Q9BUP0 239 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 EFCAB11Q9BUY7 163 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 C1QTNF2Q9BXJ5 285 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 BRINP2Q9C0B6 783 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 OR2AG1Q9H205 316 aa8.04□□□□□ -1.12
CHD4-208ENST00000540960 RNPEPL1Q9HAU8 725 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms