RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 GGHQ92820 318 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 UFD1Q92890 307 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 HGDQ93099 445 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 CREB3L1Q96BA8 519 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 PYCR2Q96C36 320 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 FAM120BQ96EK7 910 aaKnown RBP6.47□□□□□ -1.37
USP28-207ENST00000538475 GIMAP5Q96F15 307 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 B3GALT6Q96L58 329 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 FYTTD1Q96QD9 318 aaKnown RBP6.47□□□□□ -1.37
USP28-207ENST00000538475 ZSCAN5AQ9BUG6 496 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 THUMPD3Q9BV44 507 aaKnown RBP6.47□□□□□ -1.37
USP28-207ENST00000538475 SIK2Q9H0K1 926 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 SLC25A51Q9H1U9 297 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 TRIM45Q9H8W5 580 aaPredicted RBP6.47□□□□□ -1.37
USP28-207ENST00000538475 REEP1Q9H902 201 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 WDR6Q9NNW5 1121 aaKnown RBP6.47□□□□□ -1.37
USP28-207ENST00000538475 ISYNA1Q9NPH2 558 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 AASDHPPTQ9NRN7 309 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 GKN1Q9NS71 199 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 RNF146Q9NTX7 359 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 OSER1Q9NX31 292 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 LYARQ9NX58 379 aaKnown RBP6.47□□□□□ -1.37
USP28-207ENST00000538475 SH3BP4Q9P0V3 963 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 KIF17Q9P2E2 1029 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 ADAM30Q9UKF2 790 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 ACSL5Q9ULC5 683 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 INVSQ9Y283 1065 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 POFUT2Q9Y2G5 429 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 MAGED1Q9Y5V3 778 aaPredicted RBP6.47□□□□□ -1.37
USP28-207ENST00000538475 SESN1Q9Y6P5 492 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 U3KQ87 197 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 PTPRDP23468 1912 aa6.46□□□□□ -1.37
USP28-207ENST00000538475 ARPC4-TTLL3A0A0A6YYG9 625 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 ARRDC5A6NEK1 342 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 ASB14A6NK59 587 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 OR5K4A6NMS3 321 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 YDJCA8MPS7 323 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 E5RI56 91 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 M0QYT0 321 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 RGS14O43566 566 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 SULT1B1O43704 296 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 PCDHGA12O60330 932 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 KPNA6O60684 536 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 ZNF623O75123 536 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 SCG5P05408 212 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 FABP3P05413 133 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 PGRP06401 933 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 CEACAM5P06731 702 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 OR56A5P0C7T3 313 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 HLA-EP13747 358 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 ZNF37AP17032 561 aaPredicted RBP6.46□□□□□ -1.38
USP28-207ENST00000538475 TPH1P17752 444 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 RAB3AP20336 220 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 ZP3P21754 424 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 PPIBP23284 216 aaKnown RBP6.46□□□□□ -1.38
USP28-207ENST00000538475 PSMA1P25786 263 aaKnown RBP6.46□□□□□ -1.38
USP28-207ENST00000538475 PSMA3P25788 255 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 HOXA9P31269 272 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 HOXC13P31276 330 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 FMO4P31512 558 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 CXCR3P49682 368 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 GZMMP51124 257 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 KCNQ1P51787 676 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 PPP3R1P63098 170 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 POU6F2P78424 691 aaPredicted RBP6.46□□□□□ -1.38
USP28-207ENST00000538475 FLI1Q01543 452 aaPredicted RBP6.46□□□□□ -1.38
USP28-207ENST00000538475 HSF2Q03933 536 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 YWHAHQ04917 246 aaPredicted RBP6.46□□□□□ -1.38
USP28-207ENST00000538475 MGAT3Q09327 533 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 SMARCB1Q12824 385 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 CAMK2GQ13555 558 aaPredicted RBP6.46□□□□□ -1.38
USP28-207ENST00000538475 BAATQ14032 418 aaPredicted RBP6.46□□□□□ -1.38
USP28-207ENST00000538475 SIM2Q14190 667 aaPredicted RBP6.46□□□□□ -1.38
USP28-207ENST00000538475 NFE2L1Q14494 772 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 ZNF460Q14592 562 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 PCBP1Q15365 356 aaKnown RBP eCLIP6.46□□□□□ -1.38
USP28-207ENST00000538475 ZNF79Q15937 498 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 AANATQ16613 207 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 PFKFB4Q16877 469 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 DCAF4L1Q3SXM0 396 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 GPR158Q5T848 1215 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 SHEQ5VZ18 495 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 LAMTOR1Q6IAA8 161 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 TYW3Q6IPR3 259 aaKnown RBP6.46□□□□□ -1.38
USP28-207ENST00000538475 EIF3MQ7L2H7 374 aaKnown RBP6.46□□□□□ -1.38
USP28-207ENST00000538475 TMEM179BQ7Z7N9 219 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 FAM124AQ86V42 546 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 FAM131BQ86XD5 332 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 ENTHD1Q8IYW4 607 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 LINC00518Q8N0U6 118 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 PYROXD2Q8N2H3 581 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 C9orf62Q8N4C0 152 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 RNF149Q8NC42 400 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 C19orf18Q8NEA5 215 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 OR4M1Q8NGD0 313 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 GPR151Q8TDV0 419 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 UTP15Q8TED0 518 aaKnown RBP6.46□□□□□ -1.38
USP28-207ENST00000538475 ANKRD49Q8WVL7 239 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 APH1BQ8WW43 257 aa6.46□□□□□ -1.38
USP28-207ENST00000538475 SMG7Q92540 1137 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms