RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 TRAF3Q13114 568 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 ALCAMQ13740 583 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 SNTB1Q13884 538 aaKnown RBP3.11□□□□□ -1.91
SNHG1-202ENST00000535689 MELKQ14680 651 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 PTPRCAPQ14761 206 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 SF3A2Q15428 464 aaKnown RBP3.11□□□□□ -1.91
SNHG1-202ENST00000535689 IMMTQ16891 758 aaKnown RBP3.11□□□□□ -1.91
SNHG1-202ENST00000535689 CLLU1OSQ5K130 101 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 NDUFAF5Q5TEU4 345 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 KRT39Q6A163 491 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 OR7E24Q6IFN5 339 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 ASB18Q6ZVZ8 466 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 NIPA1Q7RTP0 329 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 C16orf82Q7Z2V1 217 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 ZNF410Q86VK4 478 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 GALNT13Q8IUC8 556 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 MFSD6LQ8IWD5 586 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 FOXRED2Q8IWF2 684 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 RASGEF1CQ8N431 466 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 POC1AQ8NBT0 407 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 WBP1Q96G27 269 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 FAM81BQ96LP2 452 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 SGK494Q96LW2 274 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 MBOAT7Q96N66 472 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 CDRT15Q96T59 188 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 CSF3RQ99062 836 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 HGH1Q9BTY7 390 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 IL25Q9H293 177 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 CLMPQ9H6B4 373 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 UPF2Q9HAU5 1272 aaKnown RBP3.11□□□□□ -1.91
SNHG1-202ENST00000535689 NOX4Q9NPH5 578 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 OSGIN1Q9UJX0 560 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 ANAPC2Q9UJX6 822 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 WBP11Q9Y2W2 641 aaKnown RBP3.11□□□□□ -1.91
SNHG1-202ENST00000535689 UBIAD1Q9Y5Z9 338 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 FRMPD4Q14CM0 1322 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 GON4LQ3T8J9 2241 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 PTPRBP23467 1997 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 AKAP13Q12802 2813 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 KIF26AQ9ULI4 1882 aaPredicted RBP3.1□□□□□ -1.91
SNHG1-202ENST00000535689 IGLV5-45A0A087WSX0 123 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 LOC102723996A0A087X1L8 192 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 A0A0G2JNG1 304 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 TRBC2A0A5B9 178 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 BCLAF3A2AJT9 711 aaKnown RBP3.1□□□□□ -1.91
SNHG1-202ENST00000535689 ENO4A6NNW6 628 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 FAM72CH0Y354 149 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 TMEM189-UBE2V1I3L0A0 370 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 HIP1O00291 1037 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 PSMA7O14818 248 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 EIF3DO15371 548 aaKnown RBP eCLIP3.1□□□□□ -1.91
SNHG1-202ENST00000535689 FGF17O60258 216 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 ATP9AO75110 1047 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 LDB3O75112 727 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 C22orf31O95567 290 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 AFPP02771 609 aaKnown RBP3.1□□□□□ -1.91
SNHG1-202ENST00000535689 VTNP04004 478 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 PRSS1P07477 247 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 F7P08709 466 aaPredicted RBP3.1□□□□□ -1.91
SNHG1-202ENST00000535689 CALM1P0DP23 149 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 CALM2P0DP24 149 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 CALM3P0DP25 149 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 CCNE1P24864 410 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 GDI1P31150 447 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 ARCN1P48444 511 aaKnown RBP3.1□□□□□ -1.91
SNHG1-202ENST00000535689 SLC11A1P49279 550 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 COMPP49747 757 aaPredicted RBP3.1□□□□□ -1.91
SNHG1-202ENST00000535689 ALDH3A2P51648 485 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 GPC3P51654 580 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 HERV-K104P61576 105 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 KCNJ10P78508 379 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 COG7P83436 770 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 UBE2V1Q13404 147 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 KIR2DS5Q14953 304 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 MAPK6Q16659 721 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 CEP55Q53EZ4 464 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 FAM72AQ5TYM5 149 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 FAM72DQ6L9T8 149 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 C19orf48Q6RUI8 117 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 CATSPER4Q7RTX7 472 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 TRMT1LQ7Z2T5 733 aaKnown RBP3.1□□□□□ -1.91
SNHG1-202ENST00000535689 ADCK2Q7Z695 626 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 FAM72BQ86X60 149 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 GBGT1Q8N5D6 347 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 RFLNBQ8N5W9 214 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 LMNTD1Q8N9Z9 388 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 CTCFLQ8NI51 663 aaPredicted RBP3.1□□□□□ -1.91
SNHG1-202ENST00000535689 SLC38A5Q8WUX1 472 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 TEKT4Q8WW24 435 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 TCP11Q8WWU5 503 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 SMARCD2Q92925 531 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 ZNF707Q96C28 371 aaPredicted RBP3.1□□□□□ -1.91
SNHG1-202ENST00000535689 NSL1Q96IY1 281 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 SFXN2Q96NB2 322 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 DGAT2Q96PD7 388 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 OR6C1Q96RD1 312 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 FNBP1Q96RU3 617 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 RPP25Q9BUL9 199 aaKnown RBP3.1□□□□□ -1.91
SNHG1-202ENST00000535689 TRIM6Q9C030 488 aaPredicted RBP3.1□□□□□ -1.91
SNHG1-202ENST00000535689 KLHL4Q9C0H6 718 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms