RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 KRT33AO76009 404 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 AP2A2O94973 939 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 PAK4O96013 591 aaPredicted RBP4.48□□□□□ -1.69
LSM5-209ENST00000468872 YES1P07947 543 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 GOT1P17174 413 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 CLDN17P56750 224 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 KRTAP10-5P60370 271 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 KCNJ10P78508 379 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 ARHGAP1Q07960 439 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 AP1B1Q10567 949 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 ZNF74Q16587 644 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 C2orf76Q3KRA6 126 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 FUT11Q495W5 492 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 ZNF542PQ5EBM4 170 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 FAM72AQ5TYM5 149 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 PRAMEF8Q5VWM4 474 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 FAM72DQ6L9T8 149 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 SLC25A47Q6Q0C1 308 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 SLC24A5Q71RS6 500 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 BTN2A1Q7KYR7 527 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 C5orf24Q7Z6I8 188 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 FAM72BQ86X60 149 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 SUSD6Q92537 303 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 WBP2Q969T9 261 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 AP2M1Q96CW1 435 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 ZNF501Q96CX3 271 aaPredicted RBP4.48□□□□□ -1.69
LSM5-209ENST00000468872 WBP1Q96G27 269 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 CDKN2AIPNLQ96HQ2 116 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 LPAR4Q99677 370 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 PRMT1Q99873 361 aaKnown RBP4.48□□□□□ -1.69
LSM5-209ENST00000468872 OSBPL8Q9BZF1 889 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 ACPTQ9BZG2 426 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 SLC39A8Q9C0K1 460 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 FAM49AQ9H0Q0 323 aaPredicted RBP4.48□□□□□ -1.69
LSM5-209ENST00000468872 GPR173Q9NS66 373 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 PDRG1Q9NUG6 133 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 SPG21Q9NZD8 308 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 TRPC4Q9UBN4 977 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 PRDM4Q9UKN5 801 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 STX8Q9UNK0 236 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 CFAP43Q8NDM7 1665 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 IGHV4-4A0A075B6R2 117 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 A0A087WUV0 522 aaPredicted RBP4.47□□□□□ -1.69
LSM5-209ENST00000468872 TEX28O15482 410 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 TOM1O60784 492 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 KHDRBS3O75525 346 aaKnown RBP4.47□□□□□ -1.69
LSM5-209ENST00000468872 SEC24AO95486 1093 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 HMOX1P09601 288 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 ANOS1P23352 680 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 RBMS1P29558 406 aaKnown RBP4.47□□□□□ -1.69
LSM5-209ENST00000468872 CTNNB1P35222 781 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 SERPINH1P50454 418 aaKnown RBP4.47□□□□□ -1.69
LSM5-209ENST00000468872 OR1D5P58170 312 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 KIAA1024LP59773 190 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 SP3Q02447 781 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 RPA4Q13156 261 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 SGCBQ16585 318 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 AARDQ4LEZ3 155 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 FFAR4Q5NUL3 377 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 LRRC38Q5VT99 294 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 SIGLEC15Q6ZMC9 328 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 LEKR1Q6ZMV7 388 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 GPC2Q8N158 579 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 CNBD1Q8NA66 436 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 TMEM178AQ8NBL3 297 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 LPCAT1Q8NF37 534 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 SNX21Q969T3 373 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 EPSTI1Q96J88 318 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 C17orf62Q9BQA9 187 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 ACAT2Q9BWD1 397 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 CUEDC2Q9H467 287 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 MAN2C1Q9NTJ4 1040 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.47□□□□□ -1.69
LSM5-209ENST00000468872 EPHA6Q9UF33 1036 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 SLC12A6Q9UHW9 1150 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 PILRBQ9UKJ0 227 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 TCF19Q9Y242 345 aa4.47□□□□□ -1.69
LSM5-209ENST00000468872 BCORL1Q5H9F3 1711 aa4.46□□□□□ -1.69
LSM5-209ENST00000468872 WDR81Q562E7 1941 aa4.46□□□□□ -1.69
LSM5-209ENST00000468872 KIF26BQ2KJY2 2108 aa4.46□□□□□ -1.69
LSM5-209ENST00000468872 A0A087X0K7 114 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 TRBV4-1A0A0J9YWV2 114 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 DDX39AO00148 427 aaKnown RBP4.46□□□□□ -1.7
LSM5-209ENST00000468872 PGRMC2O15173 223 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 SCO2O43819 266 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 KERAO60938 352 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 VTNP04004 478 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 SLC2A2P11168 524 aaPredicted RBP4.46□□□□□ -1.7
LSM5-209ENST00000468872 CEACAM1P13688 526 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 GNB3P16520 340 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 TEFQ10587 303 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 CETN1Q12798 172 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 ABRQ12979 859 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 RPS6KA1Q15418 735 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 CEP85LQ5SZL2 805 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 ARHGAP17Q68EM7 881 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 PSRC1Q6PGN9 363 aaPredicted RBP4.46□□□□□ -1.7
LSM5-209ENST00000468872 COX8CQ7Z4L0 72 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 LACC1Q8IV20 430 aa4.46□□□□□ -1.7
LSM5-209ENST00000468872 FAM89BQ8N5H3 189 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms