RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 CLPTM1LQ96KA5 538 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 CCNL2Q96S94 520 aaPredicted RBP7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 GPA33Q99795 319 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 TMEM175Q9BSA9 504 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 PRRG3Q9BZD7 231 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 TRIM15Q9C019 465 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 TMEM245Q9H330 911 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 NELFAQ9H3P2 528 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 PCIF1Q9H4Z3 704 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 C10orf88Q9H8K7 445 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 FBXO6Q9NRD1 293 aaPredicted RBP7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 MS4A12Q9NXJ0 267 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 POU2F3Q9UKI9 436 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 ARHGAP42A6NI28 874 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 PYCARD-AS1I3L0S3 204 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 TLR4O00206 839 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 QSOX1O00391 747 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 DCXO43602 365 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 KRT75O95678 551 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 CHRNB2P17787 502 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 ZNF10P21506 573 aaPredicted RBP7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 RPA3P35244 121 aaPredicted RBP7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 FEN1P39748 380 aaKnown RBP7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 SELENBP1Q13228 472 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 HEPACAMQ14CZ8 416 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 LRRC36Q1X8D7 754 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 OR5M10Q6IEU7 315 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 C1orf94Q6P1W5 598 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 SLC27A1Q6PCB7 646 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 GDF7Q7Z4P5 450 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 VRK2Q86Y07 508 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 LRRC56Q8IYG6 542 aaPredicted RBP7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 DTD1Q8TEA8 209 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 PYDC1Q8WXC3 89 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 ERLEC1Q96DZ1 483 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 MOV10Q9HCE1 1003 aaKnown RBP7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 CRLS1Q9UJA2 301 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 CDH9Q9ULB4 789 aa7.4□□□□□ -1.22
SPTBN1-204ENST00000467371 A0A1W2PPV4 95 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 TXNDC9O14530 226 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 SUV39H1O43463 412 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 RAD17O75943 681 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 MT-ND2P03891 347 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 STAG3L1P0CL83 205 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 IFNGR1P15260 489 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 ITIH2P19823 946 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 PRPS1L1P21108 318 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 FGFR3P22607 806 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 CXCR2P25025 360 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 CD40LGP29965 261 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 YWHABP31946 246 aaKnown RBP7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 CD80P33681 288 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 COILP38432 576 aaPredicted RBP7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 PNLIPRP2P54317 469 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 SRP54P61011 504 aaKnown RBP7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 RAB4BP61018 213 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 SNTA1Q13424 505 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 UBAP2LQ14157 1087 aaKnown RBP7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 SIX1Q15475 284 aaPredicted RBP7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 PCK2Q16822 640 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 HP1BP3Q5SSJ5 553 aaPredicted RBP7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 SLX4IPQ5VYV7 408 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 LYSMD3Q7Z3D4 306 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 LHFPL4Q7Z7J7 247 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 PLCZ1Q86YW0 608 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 GUF1Q8N442 669 aaKnown RBP7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 PDZD8Q8NEN9 1154 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 OR56A3Q8NH54 315 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 POMGNT1Q8WZA1 660 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 DLG3Q92796 817 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 TAMM41Q96BW9 452 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 ISOC1Q96CN7 298 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 TEFMQ96QE5 360 aaKnown RBP7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 NPY6RQ99463 290 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 SGPP1Q9BX95 441 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 NLNQ9BYT8 704 aa7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 AAR2Q9Y312 384 aaKnown RBP7.4□□□□□ -1.23
SPTBN1-204ENST00000467371 ITGB4P16144 1822 aa7.39□□□□□ -1.23
SPTBN1-204ENST00000467371 H7C1Q1 480 aa7.39□□□□□ -1.23
SPTBN1-204ENST00000467371 KPNA4O00629 521 aaPredicted RBP7.39□□□□□ -1.23
SPTBN1-204ENST00000467371 DHHO43323 396 aa7.39□□□□□ -1.23
SPTBN1-204ENST00000467371 HCN1O60741 890 aa7.39□□□□□ -1.23
SPTBN1-204ENST00000467371 BRI3O95415 125 aa7.39□□□□□ -1.23
SPTBN1-204ENST00000467371 THBDP07204 575 aa7.39□□□□□ -1.23
SPTBN1-204ENST00000467371 H2AFZP0C0S5 128 aa7.39□□□□□ -1.23
SPTBN1-204ENST00000467371 IVDP26440 423 aa7.39□□□□□ -1.23
SPTBN1-204ENST00000467371 AKT2P31751 481 aa7.39□□□□□ -1.23
SPTBN1-204ENST00000467371 RPL23AP62750 156 aaKnown RBP7.39□□□□□ -1.23
SPTBN1-204ENST00000467371 CTBSQ01459 385 aa7.39□□□□□ -1.23
SPTBN1-204ENST00000467371 CAV1Q03135 178 aa7.39□□□□□ -1.23
SPTBN1-204ENST00000467371 NAB1Q13506 487 aa7.39□□□□□ -1.23
SPTBN1-204ENST00000467371 ATP1A4Q13733 1029 aa7.39□□□□□ -1.23
SPTBN1-204ENST00000467371 CTTNQ14247 550 aaKnown RBP7.39□□□□□ -1.23
SPTBN1-204ENST00000467371 GRM4Q14833 912 aa7.39□□□□□ -1.23
SPTBN1-204ENST00000467371 ATF7IP2Q5U623 682 aa7.39□□□□□ -1.23
SPTBN1-204ENST00000467371 KRT79Q5XKE5 535 aa7.39□□□□□ -1.23
SPTBN1-204ENST00000467371 TMEM71Q6P5X7 295 aa7.39□□□□□ -1.23
SPTBN1-204ENST00000467371 H2AFVQ71UI9 128 aa7.39□□□□□ -1.23
SPTBN1-204ENST00000467371 KCTD20Q7Z5Y7 419 aa7.39□□□□□ -1.23
SPTBN1-204ENST00000467371 AMIGO2Q86SJ2 522 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms