RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 C5orf58C9J3I9 102 aa16.12■□□□□ 0.17
TTC3-209ENST00000438055 LZTS3O60299 673 aaPredicted RBP16.12■□□□□ 0.17
TTC3-209ENST00000438055 PRMT3O60678 531 aa16.12■□□□□ 0.17
TTC3-209ENST00000438055 FGF18O76093 207 aa16.12■□□□□ 0.17
TTC3-209ENST00000438055 MAGEA2P43356 314 aa16.12■□□□□ 0.17
TTC3-209ENST00000438055 TMED10P49755 219 aaKnown RBP16.12■□□□□ 0.17
TTC3-209ENST00000438055 GCNT6Q5T4J0 391 aa16.12■□□□□ 0.17
TTC3-209ENST00000438055 LAIR1Q6GTX8 287 aa16.12■□□□□ 0.17
TTC3-209ENST00000438055 CHPT1Q8WUD6 406 aa16.12■□□□□ 0.17
TTC3-209ENST00000438055 HTRA1Q92743 480 aa16.12■□□□□ 0.17
TTC3-209ENST00000438055 IRF7Q92985 503 aa16.12■□□□□ 0.17
TTC3-209ENST00000438055 CIDECQ96AQ7 238 aaPredicted RBP16.12■□□□□ 0.17
TTC3-209ENST00000438055 TIFAQ96CG3 184 aa16.12■□□□□ 0.17
TTC3-209ENST00000438055 KLHL25Q9H0H3 589 aa16.12■□□□□ 0.17
TTC3-209ENST00000438055 EPS8L2Q9H6S3 715 aa16.12■□□□□ 0.17
TTC3-209ENST00000438055 PRKAB1Q9Y478 270 aa16.12■□□□□ 0.17
TTC3-209ENST00000438055 OLFM2O95897 454 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 KLK1P06870 262 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 PPIBP23284 216 aaKnown RBP16.11■□□□□ 0.17
TTC3-209ENST00000438055 CTSKP43235 329 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 SCARB2Q14108 478 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 COX20Q5RI15 118 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 CRIPAKQ8N1N5 446 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 DNASE1L2Q92874 299 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 GLYATL1Q969I3 302 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 DOHHQ9BU89 302 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 ZSCAN5AQ9BUG6 496 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 PALMDQ9NP74 551 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.11■□□□□ 0.17
TTC3-209ENST00000438055 JRKO75564 520 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 GABARAPO95166 117 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 ADH1AP07327 375 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 ZNF30P17039 623 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 TIA1P31483 386 aaKnown RBP eCLIP16.11■□□□□ 0.173e-6■■■■□ 21.3
TTC3-209ENST00000438055 ITGA1P56199 1179 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 TAS2R50P59544 299 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 IFI44LQ53G44 452 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 PLPP4Q5VZY2 271 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 CNKSR3Q6P9H4 555 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 RNF130Q86XS8 419 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 CHPFQ8IZ52 775 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 OR8J2Q8NGG1 315 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 OR4K3Q96R72 315 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 CHCHD6Q9BRQ6 235 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 CPEB1Q9BZB8 566 aaKnown RBP16.11■□□□□ 0.17
TTC3-209ENST00000438055 RAD18Q9NS91 495 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 ATAD3AQ9NVI7 634 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 CORO2BQ9UQ03 480 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 DOCK6Q96HP0 2047 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 ADAMDEC1O15204 470 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 IMPA1P29218 277 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 TBPL1P62380 186 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 HBA1P69905 142 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 MTAPQ13126 283 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 PPIGQ13427 754 aaKnown RBP eCLIP16.11■□□□□ 0.177e-7■□□□□ 10
TTC3-209ENST00000438055 GBX1Q14549 363 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 ARHGEF6Q15052 776 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 TIGD6Q17RP2 521 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 SPDYE7PQ495Y7 208 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 NIPAL1Q6NVV3 410 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 PHF10Q8WUB8 498 aaKnown RBP16.11■□□□□ 0.17
TTC3-209ENST00000438055 BTN2A2Q8WVV5 523 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 CCM2Q9BSQ5 444 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 DUSP21Q9H596 190 aa16.11■□□□□ 0.17
TTC3-209ENST00000438055 ZNF282Q9UDV7 671 aaPredicted RBP16.11■□□□□ 0.17
TTC3-209ENST00000438055 ELP6Q0PNE2 266 aa16.1■□□□□ 0.17
TTC3-209ENST00000438055 ARHGAP15Q53QZ3 475 aa16.1■□□□□ 0.17
TTC3-209ENST00000438055 COLEC12Q5KU26 742 aa16.1■□□□□ 0.17
TTC3-209ENST00000438055 MSANTD1Q6ZTZ1 278 aa16.1■□□□□ 0.17
TTC3-209ENST00000438055 C11orf96Q7Z7L8 435 aa16.1■□□□□ 0.17
TTC3-209ENST00000438055 OR9Q2Q8NGE9 314 aa16.1■□□□□ 0.17
TTC3-209ENST00000438055 TDP1Q9NUW8 608 aa16.1■□□□□ 0.17
TTC3-209ENST00000438055 PLAGL1Q9UM63 463 aa16.1■□□□□ 0.17
TTC3-209ENST00000438055 CASP8AP2Q9UKL3 1982 aa16.1■□□□□ 0.17
TTC3-209ENST00000438055 IGLV3-16A0A075B6K0 115 aa16.1■□□□□ 0.17
TTC3-209ENST00000438055 DNAJB5O75953 348 aa16.1■□□□□ 0.17
TTC3-209ENST00000438055 DLGAP3O95886 979 aa16.1■□□□□ 0.17
TTC3-209ENST00000438055 HOXA9P31269 272 aa16.1■□□□□ 0.17
TTC3-209ENST00000438055 S100A5P33763 92 aa16.1■□□□□ 0.17
TTC3-209ENST00000438055 CCR2P41597 374 aa16.1■□□□□ 0.17
TTC3-209ENST00000438055 SPIN4Q56A73 249 aa16.1■□□□□ 0.17
TTC3-209ENST00000438055 GRHL2Q6ISB3 625 aa16.1■□□□□ 0.17
TTC3-209ENST00000438055 MYDGFQ969H8 173 aa16.1■□□□□ 0.17
TTC3-209ENST00000438055 REPS1Q96D71 796 aa16.1■□□□□ 0.17
TTC3-209ENST00000438055 IL17FQ96PD4 163 aa16.1■□□□□ 0.17
TTC3-209ENST00000438055 ZBTB20Q9HC78 741 aaPredicted RBP16.1■□□□□ 0.17
TTC3-209ENST00000438055 GPR83Q9NYM4 423 aa16.1■□□□□ 0.17
TTC3-209ENST00000438055 ERVW-1Q9UQF0 538 aa16.1■□□□□ 0.17
TTC3-209ENST00000438055 MKI67P46013 3256 aaKnown RBP16.1■□□□□ 0.17
TTC3-209ENST00000438055 J3KTA2 159 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 SCN2BO60939 215 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 SERPINB1P30740 379 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 GPR1P46091 355 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 MED22Q15528 200 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 TEAD4Q15561 434 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 EXOC3L2Q2M3D2 409 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 PROX2Q3B8N5 592 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 COMMD6Q7Z4G1 85 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 ADCK2Q7Z695 626 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 ENTHD1Q8IYW4 607 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms