RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 PSMD11O00231 422 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 NRG2O14511 850 aaPredicted RBP12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 TGM5O43548 720 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 CCDC159P0C7I6 412 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 JUPP14923 745 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 LIPAP38571 399 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 SLC19A1P41440 591 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 ST3GAL4Q11206 333 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 LEXMQ3ZCV2 418 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 C5orf22Q49AR2 442 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 PRSS36Q5K4E3 855 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 WDR36Q8NI36 951 aaKnown RBP12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 EXOSC8Q96B26 276 aaKnown RBP12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 GPN2Q9H9Y4 310 aaPredicted RBP12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 ACOT13Q9NPJ3 140 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 TMEM98Q9Y2Y6 226 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 NEUROG3Q9Y4Z2 214 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 CKAP5Q14008 2032 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 SLC22A1O15245 554 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 GRM6O15303 877 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 OR10H3O60404 316 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 ADAM23O75077 832 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 SOCS5O75159 536 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 PFN3P60673 137 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 SCARB2Q14108 478 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 ARMCX4Q5H9R4 360 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 RPS26P11Q5JNZ5 115 aaPredicted RBP12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 IRAK1BP1Q5VVH5 260 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 ASTLQ6HA08 431 aaPredicted RBP12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 DHRS4L2Q6PKH6 230 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 GPR65Q8IYL9 337 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 WDR48Q8TAF3 677 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 CAPSLQ8WWF8 208 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 RDH12Q96NR8 316 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 TMEM175Q9BSA9 504 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 TMEM184CQ9NVA4 438 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 PCDHGB3Q9Y5G1 929 aa12.2□□□□□ -0.46
PPP4R1-202ENST00000400555 GSTM1P09488 218 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 PORP16435 677 aaPredicted RBP12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 CST5P28325 142 aaPredicted RBP12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 WASP42768 502 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 HBA1P69905 142 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 CNTN1Q12860 1018 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 TMEM115Q12893 351 aaPredicted RBP12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 TEAD2Q15562 447 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 TAB1Q15750 504 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 HIST2H2ACQ16777 129 aaPredicted RBP12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 HIST2H2AA3Q6FI13 130 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 SLC34A3Q8N130 599 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 ITFG2Q969R8 447 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 ALPK1Q96QP1 1244 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 ELAC1Q9H777 363 aaKnown RBP12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 GPBP1L1Q9HC44 474 aaPredicted RBP12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 MS4A12Q9NXJ0 267 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 EHD3Q9NZN3 535 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 PCDHB11Q9Y5F2 797 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 CCDC88CQ9P219 2028 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 ANKRD36A6QL64 1941 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 TRIM64CA6NLI5 447 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 A8MV72 311 aaPredicted RBP12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 PCDH17O14917 1159 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 TLL1O43897 1013 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 ITIH1P19827 911 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 GPC1P35052 558 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 GPR1P46091 355 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 ST8SIA6P61647 398 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 PPIGQ13427 754 aaKnown RBP eCLIP12.19□□□□□ -0.469e-9■■□□□ 11.6
PPP4R1-202ENST00000400555 CCDC85BQ15834 202 aaPredicted RBP12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 TPGS2Q68CL5 300 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 ZFYVE19Q96K21 471 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 NIPSNAP1Q9BPW8 284 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 STOX2Q9P2F5 926 aaPredicted RBP12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 SLC6A14Q9UN76 642 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 RNF6Q9Y252 685 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 GLOD5A6NK44 160 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 ATG13O75143 517 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 CRISP3P54108 245 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 RGNQ15493 299 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 LHX8Q68G74 356 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 NIPAL1Q6NVV3 410 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 MED27Q6P2C8 311 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 TTC23LQ6PF05 361 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 EIF3MQ7L2H7 374 aaKnown RBP12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 BCDIN3DQ7Z5W3 292 aaKnown RBP12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 PTOV1Q86YD1 416 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 XAGE5Q8WWM1 108 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 CNPPD1Q9BV87 410 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 DNAJC27Q9NZQ0 273 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 TMPRSS11EQ9UL52 423 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 AP3M1Q9Y2T2 418 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 BACE2Q9Y5Z0 518 aa12.19□□□□□ -0.46
PPP4R1-202ENST00000400555 JUNBP17275 347 aaPredicted RBP12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 HNMTP50135 292 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 IFITM3Q01628 133 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 GBX1Q14549 363 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 ANKRD13BQ86YJ7 626 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 CELF5Q8N6W0 485 aaKnown RBP12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 AQP11Q8NBQ7 271 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 KREMEN2Q8NCW0 462 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms