RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 MYOFQ9NZM1 2061 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 TSPAN6O43657 245 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 TMCC2O75069 709 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 CD160O95971 181 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 SLC16A1P53985 500 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 RACK1P63244 317 aaKnown RBP11.14□□□□□ -0.63
SEC23B-204ENST00000377475 PPIGQ13427 754 aaKnown RBP eCLIP11.14□□□□□ -0.632e-6■■□□□ 14.1
SEC23B-204ENST00000377475 CLEC12AQ5QGZ9 265 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 ATG9BQ674R7 924 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 THOC6Q86W42 341 aaKnown RBP11.14□□□□□ -0.63
SEC23B-204ENST00000377475 GOLM1Q8NBJ4 401 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 C11orf65Q8NCR3 313 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 XAGE5Q8WWM1 108 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 PHOX2BQ99453 314 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 MROQ9BYG7 248 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 CCDC88CQ9P219 2028 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 TMEM221A6NGB7 291 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 RFPL2O75678 378 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 NPPAP01160 153 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 C9P02748 559 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 RPLP0P05388 317 aaKnown RBP11.14□□□□□ -0.63
SEC23B-204ENST00000377475 GPC1P35052 558 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 CLCN4P51793 760 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 OR2B6P58173 313 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 SELENBP1Q13228 472 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 GAB1Q13480 694 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 PLEKHG6Q3KR16 790 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 ZMAT1Q5H9K5 638 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 LIPKQ5VXJ0 399 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 IFNL1Q8IU54 200 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 CCDC71Q8IV32 467 aaPredicted RBP11.14□□□□□ -0.63
SEC23B-204ENST00000377475 ALDH16A1Q8IZ83 802 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 PARP16Q8N5Y8 322 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 MRPS31Q92665 395 aaKnown RBP11.14□□□□□ -0.63
SEC23B-204ENST00000377475 MYDGFQ969H8 173 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 SLC38A4Q969I6 547 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 EXOSC8Q96B26 276 aaKnown RBP11.14□□□□□ -0.63
SEC23B-204ENST00000377475 MTERF3Q96E29 417 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 C1GALT1C1Q96EU7 318 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 FAM129BQ96TA1 746 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 P2RY12Q9H244 342 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 SERHLQ9NQF3 203 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 RNF186Q9NXI6 227 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 ATG2BQ96BY7 2078 aa11.14□□□□□ -0.63
SEC23B-204ENST00000377475 NYNRINQ9P2P1 1898 aaKnown RBP11.14□□□□□ -0.63
SEC23B-204ENST00000377475 A0A1B0GVC2 190 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 A6NIN4 97 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 GABARAPO95166 117 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 GADD45GO95257 159 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 HPRP00739 348 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 URODP06132 367 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 PRPS2P11908 318 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 PCMT1P22061 227 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 TAS2R50P59544 299 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 MLLT1Q03111 559 aaPredicted RBP11.13□□□□□ -0.63
SEC23B-204ENST00000377475 RING1Q06587 406 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 NFE2L1Q14494 772 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 AGTRAPQ6RW13 159 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 FAM131AQ6UXB0 335 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 NEDD4LQ96PU5 975 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 MACROD1Q9BQ69 325 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 PRR14Q9BWN1 585 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.13□□□□□ -0.63
SEC23B-204ENST00000377475 EQTNQ9NQ60 294 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 MARCH5Q9NX47 278 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 H3BNC9 293 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 INPPL1O15357 1258 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 PRAMEF4O60810 478 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 ERAL1O75616 437 aaKnown RBP11.13□□□□□ -0.63
SEC23B-204ENST00000377475 VNN2O95498 520 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 PRPS1L1P21108 318 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 PPM1FP49593 454 aaPredicted RBP11.13□□□□□ -0.63
SEC23B-204ENST00000377475 PPP5CP53041 499 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 ZNF362Q5T0B9 420 aaPredicted RBP11.13□□□□□ -0.63
SEC23B-204ENST00000377475 PRAMEF9Q5VWM5 478 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 CYP4Z2PQ8N1L4 340 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 METTL4Q8N3J2 472 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 GGHQ92820 318 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 PPP1R14BQ96C90 147 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 NEK6Q9HC98 313 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 COMMD3Q9UBI1 195 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 CLEC2DQ9UHP7 191 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 ERVK-11Q9UQG0 969 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 TET1Q8NFU7 2136 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 WASHC1A8K0Z3 465 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 BCHEP06276 602 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 RETP07949 1114 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 HLA-EP13747 358 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 LHCGRP22888 699 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 CD6P30203 668 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 CNR2P34972 360 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 FKBP1BP68106 108 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 DSC1Q08554 894 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 SCARB2Q14108 478 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 BCL7AQ4VC05 210 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 TMEM220Q6QAJ8 160 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 PAQR6Q6TCH4 344 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 WASH2PQ6VEQ5 465 aa11.13□□□□□ -0.63
SEC23B-204ENST00000377475 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.13□□□□□ -0.633e-7■■□□□ 13.3
SEC23B-204ENST00000377475 FAM20CQ8IXL6 584 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms