RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 PIK3R3Q92569 461 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 SH3KBP1Q96B97 665 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 EPYCQ99645 322 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 TIGARQ9NQ88 270 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 FKBP14Q9NWM8 211 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 FZD4Q9ULV1 537 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 DUSP12Q9UNI6 340 aa14.28□□□□□ -0.12
COL9A2-202ENST00000372748 CENPBD1B2RD01 187 aa14.27□□□□□ -0.12
COL9A2-202ENST00000372748 CAPN5O15484 640 aaPredicted RBP14.27□□□□□ -0.12
COL9A2-202ENST00000372748 CHRNB1P11230 501 aa14.27□□□□□ -0.12
COL9A2-202ENST00000372748 LAMP1P11279 417 aa14.27□□□□□ -0.12
COL9A2-202ENST00000372748 WNT3P56703 355 aa14.27□□□□□ -0.12
COL9A2-202ENST00000372748 FBXO43Q4G163 708 aa14.27□□□□□ -0.12
COL9A2-202ENST00000372748 GPRC6AQ5T6X5 926 aa14.27□□□□□ -0.12
COL9A2-202ENST00000372748 UBE2J2Q8N2K1 259 aa14.27□□□□□ -0.12
COL9A2-202ENST00000372748 OR7G1Q8NGA0 311 aa14.27□□□□□ -0.12
COL9A2-202ENST00000372748 FYTTD1Q96QD9 318 aaKnown RBP14.27□□□□□ -0.12
COL9A2-202ENST00000372748 SLC29A3Q9BZD2 475 aa14.27□□□□□ -0.12
COL9A2-202ENST00000372748 LRFN2Q9ULH4 789 aa14.27□□□□□ -0.12
COL9A2-202ENST00000372748 CFL2Q9Y281 166 aa14.27□□□□□ -0.12
COL9A2-202ENST00000372748 CFAP20Q9Y6A4 193 aaKnown RBP14.27□□□□□ -0.12
COL9A2-202ENST00000372748 TBKBP1A7MCY6 615 aa14.27□□□□□ -0.13
COL9A2-202ENST00000372748 E9PQ18 207 aa14.27□□□□□ -0.13
COL9A2-202ENST00000372748 TNFRSF10AO00220 468 aa14.27□□□□□ -0.13
COL9A2-202ENST00000372748 ARHGAP33O14559 1287 aa14.27□□□□□ -0.13
COL9A2-202ENST00000372748 CA12O43570 354 aa14.27□□□□□ -0.13
COL9A2-202ENST00000372748 TBL1XO60907 577 aa14.27□□□□□ -0.13
COL9A2-202ENST00000372748 SCN2BO60939 215 aa14.27□□□□□ -0.13
COL9A2-202ENST00000372748 GPX5O75715 221 aa14.27□□□□□ -0.13
COL9A2-202ENST00000372748 GALTP07902 379 aa14.27□□□□□ -0.13
COL9A2-202ENST00000372748 ANXA5P08758 320 aa14.27□□□□□ -0.13
COL9A2-202ENST00000372748 ITPKAP23677 461 aa14.27□□□□□ -0.13
COL9A2-202ENST00000372748 ARPC4P59998 168 aa14.27□□□□□ -0.13
COL9A2-202ENST00000372748 NFATC2Q13469 925 aa14.27□□□□□ -0.13
COL9A2-202ENST00000372748 TRIM60Q495X7 471 aa14.27□□□□□ -0.13
COL9A2-202ENST00000372748 FAM209AQ5JX71 171 aa14.27□□□□□ -0.13
COL9A2-202ENST00000372748 ADGRF1Q5T601 910 aa14.27□□□□□ -0.13
COL9A2-202ENST00000372748 CERS6Q6ZMG9 384 aa14.27□□□□□ -0.13
COL9A2-202ENST00000372748 RAB43Q86YS6 212 aa14.27□□□□□ -0.13
COL9A2-202ENST00000372748 CACTIN-AS1Q8N1I8 211 aa14.27□□□□□ -0.13
COL9A2-202ENST00000372748 GTPBP3Q969Y2 492 aaKnown RBP14.27□□□□□ -0.13
COL9A2-202ENST00000372748 SLC32A1Q9H598 525 aa14.27□□□□□ -0.13
COL9A2-202ENST00000372748 TRIM39Q9HCM9 518 aa14.27□□□□□ -0.13
COL9A2-202ENST00000372748 IL26Q9NPH9 171 aa14.27□□□□□ -0.13
COL9A2-202ENST00000372748 NDUFAF4Q9P032 175 aa14.27□□□□□ -0.13
COL9A2-202ENST00000372748 GPSM3Q9Y4H4 160 aa14.27□□□□□ -0.13
COL9A2-202ENST00000372748 PCDHGA2Q9Y5H1 932 aa14.27□□□□□ -0.13
COL9A2-202ENST00000372748 CCRL2O00421 344 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 PRAMEF4O60810 478 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 SLITRK5O94991 958 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 AMD1P17707 334 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 CST5P28325 142 aaPredicted RBP14.26□□□□□ -0.13
COL9A2-202ENST00000372748 SPIBQ01892 262 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 PLD1Q13393 1074 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 Q5BKY6 102 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 PRAMEF9Q5VWM5 478 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 NEK5Q6P3R8 708 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 ERICH5Q6P6B1 374 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 MCCC1Q96RQ3 725 aaPredicted RBP14.26□□□□□ -0.13
COL9A2-202ENST00000372748 COPS8Q99627 209 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 RANGRFQ9HD47 186 aaPredicted RBP14.26□□□□□ -0.13
COL9A2-202ENST00000372748 LHX3Q9UBR4 397 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 CRLS1Q9UJA2 301 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 MEIOCA2RUB1 952 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 TMEM229AB2RXF0 380 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 RPS19P39019 145 aaKnown RBP14.26□□□□□ -0.13
COL9A2-202ENST00000372748 SOX3P41225 446 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 CSTF3Q12996 717 aaKnown RBP14.26□□□□□ -0.13
COL9A2-202ENST00000372748 ANKS3Q6ZW76 656 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 ATCAYQ86WG3 371 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 LAX1Q8IWV1 398 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 LGI4Q8N135 537 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 PGBD3Q8N328 593 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 WDR36Q8NI36 951 aaKnown RBP14.26□□□□□ -0.13
COL9A2-202ENST00000372748 WFDC5Q8TCV5 224 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 CMTM7Q96FZ5 175 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 TTLL2Q9BWV7 592 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 PRRG3Q9BZD7 231 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 SMURF1Q9HCE7 757 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 NPAP1Q9NZP6 1156 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 SLC22A14Q9Y267 594 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 KLHL20Q9Y2M5 609 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 PIKFYVEQ9Y2I7 2098 aa14.26□□□□□ -0.13
COL9A2-202ENST00000372748 EFCAB10A6NFE3 127 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 H7C4K7 107 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 J3KTA2 159 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 PCDH7O60245 1069 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 CLDN7O95471 211 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 GABRB1P18505 474 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 HOXD11P31277 338 aaPredicted RBP14.25□□□□□ -0.13
COL9A2-202ENST00000372748 ETV6P41212 452 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 OLR1P78380 273 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 E2F2Q14209 437 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 SSX1Q16384 188 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 TAF12Q16514 161 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 EXOC3L2Q2M3D2 409 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 TCTN1Q2MV58 587 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 SMUG1Q53HV7 270 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 SYNPOQ8N3V7 929 aa14.25□□□□□ -0.13
COL9A2-202ENST00000372748 UBTD2Q8WUN7 234 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms