RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 UGDHO60701 494 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 ZNF182P17025 639 aaPredicted RBP11.31□□□□□ -0.6
RHO-201ENST00000296271 IGFBP5P24593 272 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 ACADLP28330 430 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 SLC19A1P41440 591 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 MAGEA2P43356 314 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 TRPC1P48995 793 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 ENTPD1P49961 510 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 RPS26P62854 115 aaKnown RBP11.31□□□□□ -0.6
RHO-201ENST00000296271 RGNQ15493 299 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 ANKDD1AQ495B1 522 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 IQCCQ4KMZ1 466 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 OR2T5Q6IEZ7 315 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 CCDC71Q8IV32 467 aaPredicted RBP11.31□□□□□ -0.6
RHO-201ENST00000296271 SPARTQ8N0X7 666 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 SYNPOQ8N3V7 929 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 OR2T29Q8NH02 315 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 OR52J3Q8NH60 311 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 ZFP90Q8TF47 636 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 RPP25Q9BUL9 199 aaKnown RBP11.31□□□□□ -0.6
RHO-201ENST00000296271 CCDC90BQ9GZT6 254 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 IL1RAPQ9NPH3 570 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 PRSS16Q9NQE7 514 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 DMRT3Q9NQL9 472 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 RASSF1Q9NS23 344 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 TUBA8Q9NY65 449 aaPredicted RBP11.31□□□□□ -0.6
RHO-201ENST00000296271 PLEKHM1Q9Y4G2 1056 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 MAP4K5Q9Y4K4 846 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 SNX11Q9Y5W9 270 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 HEATR5BQ9P2D3 2071 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 SERTM1A2A2V5 107 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 ZNF197O14709 1029 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 INMTO95050 263 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 C1GALT1C1LP0DN25 315 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 OPRD1P41143 372 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 GALK1P51570 392 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 DGKEP52429 567 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 EMP3P54852 163 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 IL5RAQ01344 420 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 C2orf80Q0P641 193 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 ZNF773Q6PK81 442 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 ZNF555Q8NEP9 628 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 OR52E4Q8NGH9 312 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 LRIG1Q96JA1 1093 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 MACROD1Q9BQ69 325 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 FAM120CQ9NX05 1096 aaKnown RBP11.3□□□□□ -0.6
RHO-201ENST00000296271 USE1Q9NZ43 259 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 SPASTQ9UBP0 616 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 SAMHD1Q9Y3Z3 626 aaKnown RBP11.3□□□□□ -0.6
RHO-201ENST00000296271 SNRNP200O75643 2136 aaKnown RBP11.3□□□□□ -0.6
RHO-201ENST00000296271 EDDM13A0A1B0GTR0 161 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 J3KTA2 159 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 MID1O15344 667 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 MYO1DO94832 1006 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 SEMG1P04279 462 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 MAP2K4P45985 399 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 PNLIPRP1P54315 467 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 TAS2R38P59533 333 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 BNIP3Q12983 259 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 GPM6BQ13491 265 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 ELAVL3Q14576 367 aaKnown RBP11.3□□□□□ -0.6
RHO-201ENST00000296271 ERN2Q76MJ5 926 aaKnown RBP11.3□□□□□ -0.6
RHO-201ENST00000296271 ZC3H7AQ8IWR0 971 aaKnown RBP11.3□□□□□ -0.6
RHO-201ENST00000296271 NRSN1Q8IZ57 195 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 SVOPLQ8N434 492 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 AMER3Q8N944 861 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 TERB1Q8NA31 727 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.3□□□□□ -0.6
RHO-201ENST00000296271 SGPP1Q9BX95 441 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 MAGIXQ9H6Y5 334 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 C8orf4Q9NR00 106 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 TAC3Q9UHF0 121 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 PNMA8BQ9ULN7 279 aaPredicted RBP11.3□□□□□ -0.6
RHO-201ENST00000296271 GON4LQ3T8J9 2241 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 CKAP5Q14008 2032 aa11.3□□□□□ -0.6
RHO-201ENST00000296271 SLC1A7O00341 560 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 BCKDKO14874 412 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 MAGEB3O15480 346 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 HPRP00739 348 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 FABP3P05413 133 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 IL3P08700 152 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 DRD3P35462 400 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 MLLT10P55197 1068 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 KCNJ10P78508 379 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 BCL7AQ4VC05 210 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 ZNF691Q5VV52 312 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 VITQ6UXI7 678 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.29□□□□□ -0.6
RHO-201ENST00000296271 ZNF557Q8N988 423 aaPredicted RBP11.29□□□□□ -0.6
RHO-201ENST00000296271 SMYD1Q8NB12 490 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 LEMD2Q8NC56 503 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 C16orf78Q8WTQ4 265 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 SLC5A11Q8WWX8 675 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 C7orf34Q96L11 122 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 F2RL3Q96RI0 385 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 RSPO3Q9BXY4 272 aaPredicted RBP11.29□□□□□ -0.6
RHO-201ENST00000296271 OR52A5Q9H2C5 316 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 XKR8Q9H6D3 395 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 BRF2Q9HAW0 419 aa11.29□□□□□ -0.6
RHO-201ENST00000296271 RLIMQ9NVW2 624 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms