RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 C11orf65Q8NCR3 313 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 WDR36Q8NI36 951 aaKnown RBP13.01□□□□□ -0.33
VHL-201ENST00000256474 PHF10Q8WUB8 498 aaKnown RBP13.01□□□□□ -0.33
VHL-201ENST00000256474 S100ZQ8WXG8 99 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 CLP1Q92989 425 aaKnown RBP13.01□□□□□ -0.33
VHL-201ENST00000256474 TMEM203Q969S6 136 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 ALG14Q96F25 216 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 SLC12A9Q9BXP2 914 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 MIEF1Q9NQG6 463 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 ERVK13-1Q9NX77 482 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 MS4A12Q9NXJ0 267 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 EHD3Q9NZN3 535 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 ANKDD1BA6NHY2 528 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 SLC16A6O15403 523 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 RYKP34925 604 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 PPIGQ13427 754 aaKnown RBP eCLIP13.01□□□□□ -0.33
VHL-201ENST00000256474 FXNQ16595 210 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 RPS26P11Q5JNZ5 115 aaPredicted RBP13.01□□□□□ -0.33
VHL-201ENST00000256474 KDM4DQ6B0I6 523 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 TMEM150AQ86TG1 271 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 NPAS3Q8IXF0 933 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 OR6Q1Q8NGQ2 317 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 ADAMTS19Q8TE59 1207 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 CENPOQ9BU64 300 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 ITPAQ9BY32 194 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 NUAK2Q9H093 628 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 PATJQ8NI35 1801 aa13.01□□□□□ -0.33
VHL-201ENST00000256474 TRBV5-3A0A0A0MS03 114 aa13□□□□□ -0.33
VHL-201ENST00000256474 PCDH17O14917 1159 aa13□□□□□ -0.33
VHL-201ENST00000256474 TEX28O15482 410 aa13□□□□□ -0.33
VHL-201ENST00000256474 JRKO75564 520 aa13□□□□□ -0.33
VHL-201ENST00000256474 LEFTY1O75610 366 aa13□□□□□ -0.33
VHL-201ENST00000256474 HLA-EP13747 358 aa13□□□□□ -0.33
VHL-201ENST00000256474 PRKAG1P54619 331 aa13□□□□□ -0.33
VHL-201ENST00000256474 HBA1P69905 142 aa13□□□□□ -0.33
VHL-201ENST00000256474 SRSF11Q05519 484 aaKnown RBP13□□□□□ -0.33
VHL-201ENST00000256474 SFSWAPQ12872 951 aaKnown RBP13□□□□□ -0.33
VHL-201ENST00000256474 MTA1Q13330 715 aa13□□□□□ -0.33
VHL-201ENST00000256474 HIST2H2ACQ16777 129 aaPredicted RBP13□□□□□ -0.33
VHL-201ENST00000256474 SPDYE7PQ495Y7 208 aa13□□□□□ -0.33
VHL-201ENST00000256474 EIF3MQ7L2H7 374 aaKnown RBP13□□□□□ -0.33
VHL-201ENST00000256474 CALHM3Q86XJ0 350 aa13□□□□□ -0.33
VHL-201ENST00000256474 NEIL2Q969S2 332 aa13□□□□□ -0.33
VHL-201ENST00000256474 DEFB118Q96PH6 123 aa13□□□□□ -0.33
VHL-201ENST00000256474 CWH43Q9H720 699 aa13□□□□□ -0.33
VHL-201ENST00000256474 DICER1Q9UPY3 1922 aaKnown RBP13□□□□□ -0.33
VHL-201ENST00000256474 PRR23AA6NEV1 266 aa13□□□□□ -0.33
VHL-201ENST00000256474 H3BM21 787 aa13□□□□□ -0.33
VHL-201ENST00000256474 WBP4O75554 376 aaKnown RBP13□□□□□ -0.33
VHL-201ENST00000256474 PTHP01270 115 aa13□□□□□ -0.33
VHL-201ENST00000256474 CATP04040 527 aaKnown RBP13□□□□□ -0.33
VHL-201ENST00000256474 C8GP07360 202 aa13□□□□□ -0.33
VHL-201ENST00000256474 IGFBP1P08833 259 aaPredicted RBP13□□□□□ -0.33
VHL-201ENST00000256474 PTPN6P29350 595 aa13□□□□□ -0.33
VHL-201ENST00000256474 TAS2R50P59544 299 aa13□□□□□ -0.33
VHL-201ENST00000256474 SLBPQ14493 270 aaKnown RBP eCLIP13□□□□□ -0.33
VHL-201ENST00000256474 ZNF404Q494X3 552 aa13□□□□□ -0.33
VHL-201ENST00000256474 LYPLAL1Q5VWZ2 237 aa13□□□□□ -0.33
VHL-201ENST00000256474 DEF8Q6ZN54 512 aa13□□□□□ -0.33
VHL-201ENST00000256474 ARMCX6Q7L4S7 300 aa13□□□□□ -0.33
VHL-201ENST00000256474 CHPFQ8IZ52 775 aa13□□□□□ -0.33
VHL-201ENST00000256474 ZNF675Q8TD23 568 aa13□□□□□ -0.33
VHL-201ENST00000256474 C2orf15Q8WU43 125 aaKnown RBP13□□□□□ -0.33
VHL-201ENST00000256474 ING5Q8WYH8 240 aa13□□□□□ -0.33
VHL-201ENST00000256474 FOPNLQ96NB1 174 aa13□□□□□ -0.33
VHL-201ENST00000256474 CNPPD1Q9BV87 410 aa13□□□□□ -0.33
VHL-201ENST00000256474 MAGIXQ9H6Y5 334 aa13□□□□□ -0.33
VHL-201ENST00000256474 TMPRSS11EQ9UL52 423 aa13□□□□□ -0.33
VHL-201ENST00000256474 RUVBL1Q9Y265 456 aaKnown RBP13□□□□□ -0.33
VHL-201ENST00000256474 CHD5Q8TDI0 1954 aa13□□□□□ -0.33
VHL-201ENST00000256474 GRXCR2A6NFK2 248 aa13□□□□□ -0.33
VHL-201ENST00000256474 TTC34A8MYJ7 566 aa13□□□□□ -0.33
VHL-201ENST00000256474 ALPPL2P10696 532 aa13□□□□□ -0.33
VHL-201ENST00000256474 JUPP14923 745 aa13□□□□□ -0.33
VHL-201ENST00000256474 CD40LGP29965 261 aa13□□□□□ -0.33
VHL-201ENST00000256474 GSTM4Q03013 218 aa13□□□□□ -0.33
VHL-201ENST00000256474 OXA1LQ15070 435 aa13□□□□□ -0.33
VHL-201ENST00000256474 TSTQ16762 297 aaKnown RBP13□□□□□ -0.33
VHL-201ENST00000256474 MPPE1Q53F39 396 aa13□□□□□ -0.33
VHL-201ENST00000256474 EEF1AKMT2Q5JPI9 291 aaKnown RBP13□□□□□ -0.33
VHL-201ENST00000256474 TPRG1LQ5T0D9 272 aa13□□□□□ -0.33
VHL-201ENST00000256474 LRIF1Q5T3J3 769 aa13□□□□□ -0.33
VHL-201ENST00000256474 PLEKHG7Q6ZR37 379 aa13□□□□□ -0.33
VHL-201ENST00000256474 PTCHD4Q6ZW05 846 aa13□□□□□ -0.33
VHL-201ENST00000256474 CELF5Q8N6W0 485 aaKnown RBP13□□□□□ -0.33
VHL-201ENST00000256474 OR7G3Q8NG95 312 aa13□□□□□ -0.33
VHL-201ENST00000256474 OTULINQ96BN8 352 aa13□□□□□ -0.33
VHL-201ENST00000256474 SPG21Q9NZD8 308 aa13□□□□□ -0.33
VHL-201ENST00000256474 DNAJC27Q9NZQ0 273 aa13□□□□□ -0.33
VHL-201ENST00000256474 PCDHB11Q9Y5F2 797 aa13□□□□□ -0.33
VHL-201ENST00000256474 CFAP54Q96N23 3096 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 C5orf58C9J3I9 102 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 HOXA2O43364 376 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 MFN2O95140 757 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 GRK5P34947 590 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 CSTF3Q12996 717 aaKnown RBP12.99□□□□□ -0.33
VHL-201ENST00000256474 RGNQ15493 299 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 ZNF385BQ569K4 471 aa12.99□□□□□ -0.33
VHL-201ENST00000256474 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.99□□□□□ -0.33
VHL-201ENST00000256474 GPR65Q8IYL9 337 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms