RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 ST6GALNAC4Q9H4F1 302 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 CD8B2A6NJW9 211 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 CD8BP10966 210 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 HOXC12P31275 282 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 SLC10A2Q12908 348 aaPredicted RBP13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 MYLK3Q32MK0 819 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 ADGRF1Q5T601 910 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 OVCA2Q8WZ82 227 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 IL17FQ96PD4 163 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 GAS2L1Q99501 681 aaPredicted RBP13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 NUSAP1Q9BXS6 441 aaKnown RBP13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 PI15O43692 258 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 ZNF517Q6ZMY9 492 aaPredicted RBP13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 TRIM73Q86UV7 250 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 SLC7A6OSQ96CW6 309 aaPredicted RBP13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 MUS81Q96NY9 551 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 UCK2Q9BZX2 261 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 MCCC2Q9HCC0 563 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 KLRF1Q9NZS2 232 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 CYTH4Q9UIA0 394 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 ACSL6Q9UKU0 697 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 SNED1Q8TER0 1413 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 A0A1W2PPL8 197 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 FGF3P11487 239 aaPredicted RBP13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 AOC1P19801 751 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 PRPS1L1P21108 318 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 ENTPD1P49961 510 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 CDKN2DP55273 166 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 FOXR2Q6PJQ5 311 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 AMIGO1Q86WK6 493 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 LYARQ9NX58 379 aaKnown RBP13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 ZNF226Q9NYT6 803 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 SIX4Q9UIU6 781 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 CMAHPQ9Y471 501 aa13.19□□□□□ -0.3
TGFBR3-201ENST00000212355 M0R2N6 131 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 SSX5O60225 188 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 ITGA5P08648 1049 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 HADHBP55084 474 aaKnown RBP13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 CYBRD1Q53TN4 286 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 NUDT13Q86X67 352 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 ERI1Q8IV48 349 aaKnown RBP13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 NLGN4XQ8N0W4 816 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 SRFBP1Q8NEF9 429 aaKnown RBP13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 BRI3BPQ8WY22 251 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 KLHL6Q8WZ60 621 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 RPF2Q9H7B2 306 aaKnown RBP13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 CRTAC1Q9NQ79 661 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 SPATA7Q9P0W8 599 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 DNMT3AQ9Y6K1 912 aaPredicted RBP13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 CDHR3Q6ZTQ4 885 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 TSSK6Q9BXA6 273 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 IL21RQ9HBE5 538 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 IL1RAPQ9NPH3 570 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 COQ3Q9NZJ6 369 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 GALNT12Q8IXK2 581 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 RASGEF1AQ8N9B8 481 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 MND1Q9BWT6 205 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 ERVK-18Q9QC07 812 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 DFNA5O60443 496 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 PTGER1P34995 402 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 NAA10P41227 235 aaPredicted RBP13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 SLC11A1P49279 550 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 BTBD16Q32M84 506 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 RAB12Q6IQ22 244 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 SYVN1Q86TM6 617 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 PHC2Q8IXK0 858 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 SPATA9Q9BWV2 254 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 DUOX1Q9NRD9 1551 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 GLTPD2A6NH11 291 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 ZNF726A6NNF4 738 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 TNFSF12O43508 249 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 GABBR2O75899 941 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 FGF19O95750 216 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 HCKP08631 526 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 NRIP1P48552 1158 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 PLGLB1Q02325 96 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 RIN1Q13671 783 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 SEMA3AQ14563 771 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 PRRT3Q5FWE3 981 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 OR5T2Q8NGG2 359 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 OR51G2Q8NGK0 314 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 RASSF5Q8WWW0 418 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 GEMIN6Q8WXD5 167 aaKnown RBP13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 SLC45A3Q96JT2 553 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 EBF1Q9UH73 591 aa13.18□□□□□ -0.3
TGFBR3-201ENST00000212355 WASH3PC4AMC7 463 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 FAM189BP81408 668 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 ZBED5Q49AG3 693 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 GTF2IRD2BQ6EKJ0 949 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 QSOX2Q6ZRP7 698 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 GTF2IRD2Q86UP8 949 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 PSD4Q8NDX1 1056 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 ZNF778Q96MU6 729 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 SYT17Q9BSW7 474 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 ADAM7Q9H2U9 754 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 TPT1P8Q9HAU6 139 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 BCL9LQ86UU0 1499 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 I3L521 148 aa13.17□□□□□ -0.3
TGFBR3-201ENST00000212355 EIF2S3P41091 472 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms