RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 9030624G23RikQ9D308 155 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Pak1ip1Q9DCE5 382 aaKnown RBP10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Acsl4Q9QUJ7 711 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Pld1Q9Z280 1074 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 TomtA1Y9I9 258 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Gm5072A2AHM1 344 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Slc6a11P31650 627 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Sox3P53784 375 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Fbxo40P62932 710 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 A630001G21RikQ3UTB2 229 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 RimklaQ6PFX8 380 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Elmod2Q8BGF6 293 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 GskipQ8BGR8 139 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Q8BHR8 331 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Csgalnact1Q8BJQ9 530 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Larp4Q8BWW4 719 aaKnown RBP10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Slc41a2Q8BYR8 573 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Akr1c21Q91WR5 323 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 UtrnE9Q6R7 3430 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Fam46dB1ATX6 390 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Znf382B2RXC5 579 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Vmn2r118E9Q1C1 853 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Hoxa9P09631 271 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Lrrc3P59034 257 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Gng2P63213 71 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Tmem130Q6NXM3 419 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Dcaf13Q6PAC3 445 aaKnown RBP10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Sbk1Q8QZX0 417 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Slc22a22Q8R0S9 554 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Vmn1r18Q8R2C8 299 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Acsl6Q91WC3 697 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Sp2Q9D2H6 612 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Nipa2Q9JJC8 359 aa10.98□□□□□ -0.65
Topbp1-201ENSMUST00000035164 SktA2AQ25 1946 aaKnown RBP10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Gm37596A0A0A6YXL2 336 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Serpinb2P12388 415 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 CdonQ32MD9 1250 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Orm1Q60590 207 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Pramel7Q810Y8 479 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Vmn1r84Q8R284 318 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Dnase1l1Q9D7J6 314 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Nacc2Q9DCM7 586 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Ap3m1Q9JKC8 418 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Gm30302A0A1Y7VN40 1110 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Gm8229K7N749 213 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 P01669 111 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Tekt4Q149S1 447 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Spin1Q61142 262 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Gm9758Q80ZT2 255 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Nlrp10Q8CCN1 673 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 ArskQ9D2L1 553 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Loxl3Q9Z175 754 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Rpl9-ps6A0A140T8T4 192 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Ddx43D3Z6P9 646 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Crisp4E9PVG4 293 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Zfp995E9Q6M3 437 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Zfp846G3X996 541 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Gfra2O08842 464 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 P01652 108 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Rpl9P51410 192 aaKnown RBP10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Opn1swP51491 346 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Gpr165Q3V3A3 455 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Zadh2Q8BGC4 377 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Metap1Q8BP48 386 aaKnown RBP10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Nt5dc1Q8C5P5 467 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Dmtf1Q8CE22 761 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Olfr357Q8VFP4 308 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Pcdhac1Q91Y10 964 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 FopnlQ9CZS3 174 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Znhit2Q9QY66 399 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Rgs6Q9Z2H2 472 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Gm7145A0A087WS64 360 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Gm4450E9Q007 373 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Rnpepl1G5E872 720 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Reps1O54916 795 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Coro1aO89053 461 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Dnajb5O89114 348 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Klrb1aP27811 227 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 IgfalsP70389 603 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Uimc1Q5U5Q9 727 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Hsd3b4Q61767 373 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Ptov1Q91VU8 416 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 DdoQ922Z0 341 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Ropn1lQ9EQ00 218 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Vmn1r29Q9EQ41 303 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Il21rQ9JHX3 529 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Spo11Q9WTK8 396 aa10.97□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Fer1l6E0CZ42 1862 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 AccsA2AIG8 502 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Prss56F2YMG0 604 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Psmc3ipO35047 217 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Usp30Q3UN04 517 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Rassf5Q5EBH1 413 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Atg16l2Q6KAU8 623 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Syt16Q7TN83 639 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 AptxQ7TQC5 342 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Cyth4Q80YW0 393 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Chpt1Q8C025 398 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 Dppa4Q8CCG4 296 aa10.96□□□□□ -0.65
Topbp1-201ENSMUST00000035164 HopxQ8R1H0 73 aa10.96□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 52.2 ms