RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Kbtbd8Q3UQV5 599 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Lcn3Q62471 182 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 C1qtnf6Q6IR41 264 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Znf366Q6NS86 746 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Tmem164Q6PHN7 296 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Rbms3Q8BWL5 431 aaKnown RBP10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Mill2Q8HWE5 355 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Slc5a11Q8K0E3 673 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Slc45a3Q8K0H7 553 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Prkd3Q8K1Y2 889 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Tnfaip8l1Q8K288 186 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Slc36a1Q8K4D3 475 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Nudt4Q8R2U6 179 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Retreg3Q9CQV4 466 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Wdr45bQ9CR39 344 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Tmprss6Q9DBI0 811 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Lat2Q9JHL0 203 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 PrepQ9QUR6 710 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 TriobpQ99KW3 2014 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ect2lA0A140LIP2 953 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Zfp973A2BE20 318 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Mup18A2BIM8 181 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Nhsl2B1AXH1 854 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Rpl3lE9PWZ3 407 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Aldh1a7O35945 501 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Mup11P04938 181 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Scg5P12961 212 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 AhcyP50247 432 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Stat6P52633 837 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Idh2P54071 452 aaKnown RBP10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Mrps6P58064 125 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Cdk18Q04899 451 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Tgm3Q08189 693 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gsk3aQ2NL51 490 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gm21320Q4FZE8 181 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Fam46cQ5SSF7 391 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ddx5Q61656 614 aaKnown RBP10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ints6Q6PCM2 883 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Casd1Q7TN73 797 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Proser3Q7TSA6 634 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Arel1Q8CHG5 823 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Cpne5Q8JZW4 593 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 NclnQ8VCM8 563 aaKnown RBP10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Olfr801Q8VEU1 318 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Olfr693Q8VF89 316 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Uts2rQ8VIH9 385 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Cwh43Q91YL7 699 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ska1Q9CPV1 254 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Unc50Q9CQ61 259 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Zfp773Q9CZ29 471 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Sdccag3A2AIW0 432 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Fam217bA2AJW5 387 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Tgm7A2ART8 616 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Slc9a3G3X939 829 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gm3755K7N743 167 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 ApoeP08226 311 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Rrm2P11157 390 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ptger4P32240 513 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ntsr2P70310 416 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Osgepl1Q6PEB4 414 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gm9758Q80ZT2 255 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Prdx6bQ8BG37 224 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Rdh12Q8BYK4 316 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Colec12Q8K4Q8 742 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Cops8Q8VBV7 209 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 NepnQ9CQ76 512 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ift27Q9D0P8 186 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ift46Q9DB07 301 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Eif3fQ9DCH4 361 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Cdh17Q9R100 827 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Spo11Q9WTK8 396 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Frmpd3A0A140LIW3 1774 aa10.54□□□□□ -0.72
Msh3-201ENSMUST00000022220 Faap100A2ACJ2 879 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Malrd1A2AJX4 2123 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Zfp938E9Q9G3 579 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gm10338K7N692 204 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Olfr237-ps1K9J725 310 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Hsd17b10O08756 261 aaKnown RBP10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Kcnj1O88335 372 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 St3gal5O88829 414 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 JunbP09450 344 aaKnown RBP10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 PtnP63089 168 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Arf5P84084 180 aaKnown RBP10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ncf4P97369 339 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Zfp39Q02525 718 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Adgrd1Q80T32 903 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ston2Q8BZ60 895 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Tmem203Q8R235 136 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ccdc71Q8VEG0 433 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Alpk2Q91ZB0 2144 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Vmp1Q99KU0 406 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Dhx34Q9DBV3 1145 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Hey1Q9WV93 299 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 PpigA2AR02 752 aaKnown RBP10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Vmn2r97K7N6Z2 861 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Vmn2r93L7N1Z9 857 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Mybpc3O70468 1270 aaKnown RBP10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Mkl2P59759 1080 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Zdhhc11Q14AK4 347 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Hbq1bQ3U0A6 142 aa10.53□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms