RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 RNF19AQ9NV58 838 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 SLC17A7Q9P2U7 560 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 P2RX2Q9UBL9 471 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 KCPQ6ZWJ8 1503 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 KLF11O14901 512 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 ADH1CP00326 375 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 XRCC1P18887 633 aaPredicted RBP6.98□□□□□ -1.29
COLCA1-205ENST00000620864 RAB39AQ14964 217 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 ZACNQ401N2 412 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 SPIN4Q56A73 249 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 PHYKPLQ8IUZ5 450 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 SVBPQ8N300 66 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 GDPD1Q8N9F7 314 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 OR10T2Q8NGX3 314 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 SLC2A14Q8TDB8 520 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 HCAR2Q8TDS4 363 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 PIWIL1Q96J94 861 aaKnown RBP6.98□□□□□ -1.29
COLCA1-205ENST00000620864 TMEM100Q9NV29 134 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 FAM198AQ9UFP1 575 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 DERAQ9Y315 318 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 MED1Q15648 1581 aaPredicted RBP6.98□□□□□ -1.29
COLCA1-205ENST00000620864 OR2AG2A6NM03 316 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 EI24O14681 340 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 GMDSO60547 372 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 SOX30O94993 753 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 ETV1P50549 477 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 PGM5Q15124 567 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF584Q8IVC4 421 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF101Q8IZC7 436 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 TDHQ8IZJ6 230 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 SMARCD2Q92925 531 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 HSPBAP1Q96EW2 488 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF436Q9C0F3 470 aaPredicted RBP6.98□□□□□ -1.29
COLCA1-205ENST00000620864 STRADBQ9C0K7 418 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 TVP23BQ9NYZ1 205 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 NLGN3Q9NZ94 848 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 FLRT1Q9NZU1 646 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 GHRLQ9UBU3 117 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 RIMKLBQ9ULI2 386 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 F8VP50 259 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 TOR1BO14657 336 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 SNAP29O95721 258 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 LAG3P18627 525 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 TCEA1P23193 301 aaKnown RBP6.97□□□□□ -1.29
COLCA1-205ENST00000620864 IL12BP29460 328 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 CCND3P30281 292 aaPredicted RBP6.97□□□□□ -1.29
COLCA1-205ENST00000620864 MC4RP32245 332 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 RAB31Q13636 194 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 WDR45BQ5MNZ6 344 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 KCNIP4Q6PIL6 250 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 DCLRE1AQ6PJP8 1040 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 GSG1LQ6UXU4 331 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 GTPBP8Q8N3Z3 284 aaPredicted RBP6.97□□□□□ -1.29
COLCA1-205ENST00000620864 FAXDC2Q96IV6 333 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 IL12RB2Q99665 862 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 GBA3Q9H227 469 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 RAB9BQ9NP90 201 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 LOC102724200A0A096LPH7 203 aaPredicted RBP6.97□□□□□ -1.29
COLCA1-205ENST00000620864 F8W036 122 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 H1F0P07305 194 aaKnown RBP6.97□□□□□ -1.29
COLCA1-205ENST00000620864 ARP10275 920 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 IL7RP16871 459 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 CHATP28329 748 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 VSX2P58304 361 aaPredicted RBP6.97□□□□□ -1.29
COLCA1-205ENST00000620864 SLC26A5P58743 744 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 PEA15Q15121 130 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 DHCR24Q15392 516 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 AARDQ4LEZ3 155 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 MPP7Q5T2T1 576 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 IDO2Q6ZQW0 420 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 USP53Q70EK8 1073 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 RALGPS2Q86X27 583 aaPredicted RBP6.97□□□□□ -1.29
COLCA1-205ENST00000620864 SNRNP25Q9BV90 132 aaKnown RBP6.97□□□□□ -1.29
COLCA1-205ENST00000620864 ARL6Q9H0F7 186 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 GNG8Q9UK08 70 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 CNOT11Q9UKZ1 510 aaKnown RBP6.97□□□□□ -1.29
COLCA1-205ENST00000620864 AGO1Q9UL18 857 aaKnown RBP6.97□□□□□ -1.29
COLCA1-205ENST00000620864 TESMINQ9Y4I5 508 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 NEURL4Q96JN8 1562 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 A0A0J9YVX5 310 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 A8MUI8 341 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 AGFG2O95081 481 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 CDRT1O95170 752 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 PLGP00747 810 aaPredicted RBP6.97□□□□□ -1.29
COLCA1-205ENST00000620864 HTR1AP08908 422 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 SLC35G6P0C7Q6 338 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 RAB3BP20337 219 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 CASP9P55211 416 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 ARL13AQ5H913 290 aaPredicted RBP6.97□□□□□ -1.29
COLCA1-205ENST00000620864 PGM2L1Q6PCE3 622 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 PLEKHG7Q6ZR37 379 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 ERMP1Q7Z2K6 904 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 TMED4Q7Z7H5 227 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 OR10A6Q8NH74 314 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 APOLD1Q96LR9 279 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 SEMA3CQ99985 751 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 HIF3AQ9Y2N7 669 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 MAP4K5Q9Y4K4 846 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 SALL1Q9NSC2 1324 aa6.97□□□□□ -1.29
COLCA1-205ENST00000620864 GXYLT2A0PJZ3 443 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms