RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 ZNF33BQ06732 778 aa21.52■■□□□ 1.03
SYNGR3-202ENST00000562045 LAPTM5Q13571 262 aa21.52■■□□□ 1.03
SYNGR3-202ENST00000562045 ABRAXAS2Q15018 415 aa21.52■■□□□ 1.03
SYNGR3-202ENST00000562045 FRG2Q64ET8 278 aa21.52■■□□□ 1.03
SYNGR3-202ENST00000562045 ICE2Q659A1 982 aa21.52■■□□□ 1.03
SYNGR3-202ENST00000562045 RAB11FIP2Q7L804 512 aa21.52■■□□□ 1.03
SYNGR3-202ENST00000562045 FITM2Q8N6M3 262 aa21.52■■□□□ 1.03
SYNGR3-202ENST00000562045 OR2A1Q8NGT9 310 aa21.52■■□□□ 1.03
SYNGR3-202ENST00000562045 SLC22A18Q96BI1 424 aa21.52■■□□□ 1.03
SYNGR3-202ENST00000562045 TUBGCP3Q96CW5 907 aa21.52■■□□□ 1.03
SYNGR3-202ENST00000562045 ERP27Q96DN0 273 aa21.52■■□□□ 1.03
SYNGR3-202ENST00000562045 FRG2BQ96QU4 278 aa21.52■■□□□ 1.03
SYNGR3-202ENST00000562045 ZFP69BQ9UJL9 534 aa21.52■■□□□ 1.03
SYNGR3-202ENST00000562045 ZNF490Q9ULM2 529 aaPredicted RBP21.52■■□□□ 1.03
SYNGR3-202ENST00000562045 PCDHGA11Q9Y5H2 935 aa21.52■■□□□ 1.03
SYNGR3-202ENST00000562045 CCDC187A0A096LP49 1063 aa21.51■■□□□ 1.03
SYNGR3-202ENST00000562045 C2orf74A8MZ97 194 aa21.51■■□□□ 1.03
SYNGR3-202ENST00000562045 CCNDBP1O95273 360 aa21.51■■□□□ 1.03
SYNGR3-202ENST00000562045 CDH1P12830 882 aa21.51■■□□□ 1.03
SYNGR3-202ENST00000562045 ABATP80404 500 aa21.51■■□□□ 1.03
SYNGR3-202ENST00000562045 PRDX1Q06830 199 aaKnown RBP21.51■■□□□ 1.03
SYNGR3-202ENST00000562045 TRA2AQ13595 282 aaKnown RBP eCLIP21.51■■□□□ 1.03
SYNGR3-202ENST00000562045 SPDYAQ5MJ70 313 aa21.51■■□□□ 1.03
SYNGR3-202ENST00000562045 LARP4Q71RC2 724 aaKnown RBP eCLIP21.51■■□□□ 1.03
SYNGR3-202ENST00000562045 PRSS42Q7Z5A4 293 aa21.51■■□□□ 1.03
SYNGR3-202ENST00000562045 SELENOMQ8WWX9 145 aa21.51■■□□□ 1.03
SYNGR3-202ENST00000562045 PMEPA1Q969W9 287 aa21.51■■□□□ 1.03
SYNGR3-202ENST00000562045 STRADBQ9C0K7 418 aa21.51■■□□□ 1.03
SYNGR3-202ENST00000562045 NMUR2Q9GZQ4 415 aa21.51■■□□□ 1.03
SYNGR3-202ENST00000562045 PELI2Q9HAT8 420 aa21.51■■□□□ 1.03
SYNGR3-202ENST00000562045 SEMA5BQ9P283 1151 aa21.51■■□□□ 1.03
SYNGR3-202ENST00000562045 KLHL20Q9Y2M5 609 aa21.51■■□□□ 1.03
SYNGR3-202ENST00000562045 ERICH4A6NGS2 130 aa21.5■■□□□ 1.03
SYNGR3-202ENST00000562045 ISM1B1AKI9 464 aa21.5■■□□□ 1.03
SYNGR3-202ENST00000562045 FCHO1O14526 889 aa21.5■■□□□ 1.03
SYNGR3-202ENST00000562045 ANKRD34CP0C6C1 535 aa21.5■■□□□ 1.03
SYNGR3-202ENST00000562045 ST6GAL1P15907 406 aa21.5■■□□□ 1.03
SYNGR3-202ENST00000562045 SLBPQ14493 270 aaKnown RBP eCLIP21.5■■□□□ 1.03
SYNGR3-202ENST00000562045 KCNAB1Q14722 419 aa21.5■■□□□ 1.03
SYNGR3-202ENST00000562045 KIR2DS3Q14952 304 aa21.5■■□□□ 1.03
SYNGR3-202ENST00000562045 HIST2H2ACQ16777 129 aaPredicted RBP21.5■■□□□ 1.03
SYNGR3-202ENST00000562045 C10orf62Q5T681 223 aaPredicted RBP21.5■■□□□ 1.03
SYNGR3-202ENST00000562045 HIST2H2AA3Q6FI13 130 aa21.5■■□□□ 1.03
SYNGR3-202ENST00000562045 MED27Q6P2C8 311 aa21.5■■□□□ 1.03
SYNGR3-202ENST00000562045 SPESP1Q6UW49 350 aa21.5■■□□□ 1.03
SYNGR3-202ENST00000562045 SCIMPQ6UWF3 145 aa21.5■■□□□ 1.03
SYNGR3-202ENST00000562045 ZNF771Q7L3S4 317 aaPredicted RBP21.5■■□□□ 1.03
SYNGR3-202ENST00000562045 TRIM46Q7Z4K8 759 aa21.5■■□□□ 1.03
SYNGR3-202ENST00000562045 GBP7Q8N8V2 638 aaPredicted RBP21.5■■□□□ 1.03
SYNGR3-202ENST00000562045 ABHD11Q8NFV4 315 aa21.5■■□□□ 1.03
SYNGR3-202ENST00000562045 KLHL6Q8WZ60 621 aa21.5■■□□□ 1.03
SYNGR3-202ENST00000562045 GATA6Q92908 595 aa21.5■■□□□ 1.03
SYNGR3-202ENST00000562045 REPS1Q96D71 796 aa21.5■■□□□ 1.03
SYNGR3-202ENST00000562045 MYLK2Q9H1R3 596 aa21.5■■□□□ 1.03
SYNGR3-202ENST00000562045 ZNF768Q9H5H4 540 aaKnown RBP21.5■■□□□ 1.03
SYNGR3-202ENST00000562045 AKTIPQ9H8T0 292 aa21.5■■□□□ 1.03
SYNGR3-202ENST00000562045 ZFHX4Q86UP3 3567 aa21.5■■□□□ 1.03
SYNGR3-202ENST00000562045 TLCD2A6NGC4 264 aa21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 SLC9B1P1A6NJY1 282 aa21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 SLC28A1O00337 649 aa21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 RGS14O43566 566 aa21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 NCF2P19878 526 aaPredicted RBP21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 CXCR2P25025 360 aa21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 GABREP78334 506 aa21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 CLNKQ7Z7G1 428 aa21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 BMPERQ8N8U9 685 aa21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 WDR36Q8NI36 951 aaKnown RBP21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 UBE2E3Q969T4 207 aa21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 HBEGFQ99075 208 aa21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 FARSBQ9NSD9 589 aaKnown RBP21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 GEMIN8Q9NWZ8 242 aaKnown RBP21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 CHD8Q9HCK8 2581 aa21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 TMX2-CTNND1H3BSU7 103 aa21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 PLD2O14939 933 aa21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 CCR8P51685 355 aa21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 SF1Q15637 639 aaKnown RBP21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 ZIC1Q15915 447 aa21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 SGO1Q5FBB7 561 aa21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 FAM129CQ86XR2 697 aa21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 KRT78Q8N1N4 520 aa21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 WDR20Q8TBZ3 569 aa21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 CMKLR1Q99788 373 aa21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 MRPS30Q9NP92 439 aaKnown RBP21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 PISDQ9UG56 409 aa21.49■■□□□ 1.03
SYNGR3-202ENST00000562045 SERTM1A2A2V5 107 aa21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 EFCAB7A8K855 629 aa21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 TOX3O15405 576 aaPredicted RBP21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 PDYNP01213 254 aa21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 LBPP18428 481 aa21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 CDH3P22223 829 aa21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 CMPK1P30085 196 aa21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 CSTF2P33240 577 aaKnown RBP eCLIP21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 RTP5Q14D33 572 aa21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 IMPG1Q17R60 797 aa21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 ATP6AP1LQ52LC2 224 aa21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 Q6ZSR9 355 aa21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 AGBL5Q8NDL9 886 aa21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 OR2L3Q8NG85 312 aa21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 OR7G3Q8NG95 312 aa21.48■■□□□ 1.03
SYNGR3-202ENST00000562045 OR2T11Q8NH01 316 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms