RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 GRID2IPA4D2P6 1211 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 TXNDC9O14530 226 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 PRMT3O60678 531 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 NSA2O95478 260 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 METTL18O95568 372 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 STATHP02808 62 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 INHBBP09529 407 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 ERGP11308 486 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 PKMP14618 531 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 EZRP15311 586 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 ADSLP30566 484 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 CCNFP41002 786 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 XCR1P46094 333 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 ITGA8P53708 1063 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 SLC26A5P58743 744 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 SNTB1Q13884 538 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 SPA17Q15506 151 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 NDUFA9Q16795 377 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 CCDC181Q5TID7 509 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 ARHGAP11AQ6P4F7 1023 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 DARS2Q6PI48 645 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 AFTPHQ6ULP2 937 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 ARSKQ6UWY0 536 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 CLEC9AQ6UXN8 241 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 ACAD11Q709F0 780 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 CAMKMTQ7Z624 323 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 LDB1Q86U70 411 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 CDC20BQ86Y33 519 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 SULF2Q8IWU5 870 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 KIF2BQ8N4N8 673 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 MYRIPQ8NFW9 859 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 OR52N2Q8NGI0 321 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 C16orf52Q8NHV5 167 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 SPATA3Q8NHX4 192 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 ELP5Q8TE02 316 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 SKA2Q8WVK7 121 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 TTC1Q99614 292 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 LPAR4Q99677 370 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 ANP32EQ9BTT0 268 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 LRRC40Q9H9A6 602 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 GRPEL1Q9HAV7 217 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 MRFAP1Q9Y605 127 aa12.01□□□□□ -0.49
RABGGTA-213ENST00000560127 MACROD2A1Z1Q3 448 aa12□□□□□ -0.49
RABGGTA-213ENST00000560127 ARHGEF33A8MVX0 844 aa12□□□□□ -0.49
RABGGTA-213ENST00000560127 HAT1O14929 419 aa12□□□□□ -0.49
RABGGTA-213ENST00000560127 PDE9AO76083 593 aa12□□□□□ -0.49
RABGGTA-213ENST00000560127 HEXAP06865 529 aa12□□□□□ -0.49
RABGGTA-213ENST00000560127 RPA3P35244 121 aaPredicted RBP12□□□□□ -0.49
RABGGTA-213ENST00000560127 RHAGQ02094 409 aa12□□□□□ -0.49
RABGGTA-213ENST00000560127 RELAQ04206 551 aa12□□□□□ -0.49
RABGGTA-213ENST00000560127 PRDX1Q06830 199 aaKnown RBP12□□□□□ -0.49
RABGGTA-213ENST00000560127 ACTN3Q08043 901 aaPredicted RBP12□□□□□ -0.49
RABGGTA-213ENST00000560127 PARP6Q2NL67 630 aa12□□□□□ -0.49
RABGGTA-213ENST00000560127 ICE2Q659A1 982 aa12□□□□□ -0.49
RABGGTA-213ENST00000560127 PAMR1Q6UXH9 720 aa12□□□□□ -0.49
RABGGTA-213ENST00000560127 PCGF5Q86SE9 256 aa12□□□□□ -0.49
RABGGTA-213ENST00000560127 PLD3Q8IV08 490 aa12□□□□□ -0.49
RABGGTA-213ENST00000560127 LIX1LQ8IVB5 337 aa12□□□□□ -0.49
RABGGTA-213ENST00000560127 PLPP5Q8NEB5 264 aa12□□□□□ -0.49
RABGGTA-213ENST00000560127 OR5M3Q8NGP4 307 aa12□□□□□ -0.49
RABGGTA-213ENST00000560127 OR4L1Q8NH43 312 aa12□□□□□ -0.49
RABGGTA-213ENST00000560127 GSDMBQ8TAX9 411 aa12□□□□□ -0.49
RABGGTA-213ENST00000560127 SMPDL3AQ92484 453 aa12□□□□□ -0.49
RABGGTA-213ENST00000560127 ALG3Q92685 438 aa12□□□□□ -0.49
RABGGTA-213ENST00000560127 TSLPQ969D9 159 aa12□□□□□ -0.49
RABGGTA-213ENST00000560127 TMEM125Q96AQ2 219 aa12□□□□□ -0.49
RABGGTA-213ENST00000560127 ZNF778Q96MU6 729 aa12□□□□□ -0.49
RABGGTA-213ENST00000560127 TAC3Q9UHF0 121 aa12□□□□□ -0.49
RABGGTA-213ENST00000560127 EDARQ9UNE0 448 aa12□□□□□ -0.49
RABGGTA-213ENST00000560127 KLF13Q9Y2Y9 288 aaPredicted RBP12□□□□□ -0.49
RABGGTA-213ENST00000560127 CAPN6Q9Y6Q1 641 aa12□□□□□ -0.49
RABGGTA-213ENST00000560127 NCKAP5O14513 1909 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 NINQ8N4C6 2090 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 A0A0G2JNJ9 132 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 KLRC4-KLRK1H3BQV0 150 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 SGK494L7N484 410 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 PRMT5O14744 637 aaPredicted RBP11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 PEX1O43933 1283 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 MATN4O95460 622 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 IL1RNP18510 177 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 CTNNA2P26232 953 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 HOXC12P31275 282 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 TRHRP34981 398 aaPredicted RBP11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 BCL6P41182 706 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 HLCSP50747 726 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 MLF1P58340 268 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 ABRAXAS2Q15018 415 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 NSDHLQ15738 373 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 DEFB113Q30KQ7 82 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 PTRHD1Q6GMV3 140 aaKnown RBP11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 CXXC5Q7LFL8 322 aaKnown RBP11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 KRTAP1-3Q8IUG1 177 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 ZFP62Q8NB50 900 aaPredicted RBP11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 OR10Q1Q8NGQ4 319 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 OR9A1PQ8NGU1 263 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 GOT1L1Q8NHS2 421 aaPredicted RBP11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 MAGEC3Q8TD91 643 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 NUDT8Q8WV74 236 aa11.99□□□□□ -0.49
RABGGTA-213ENST00000560127 FOPNLQ96NB1 174 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms