RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.56□□□□□ -1.68
SYNE2-210ENST00000553455 C2orf42Q9NWW7 574 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 SPG21Q9NZD8 308 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 EPHA6Q9UF33 1036 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 IL36AQ9UHA7 158 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 PILRBQ9UKJ0 227 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 PRDM4Q9UKN5 801 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 STX8Q9UNK0 236 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 NSG2Q9Y328 171 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 DISP3Q9P2K9 1392 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 IGHV4-4A0A075B6R2 117 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 SCO2O43819 266 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 RAD51DO75771 328 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 VTNP04004 478 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 SLC2A2P11168 524 aaPredicted RBP4.55□□□□□ -1.68
SYNE2-210ENST00000553455 CEACAM1P13688 526 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 GNB3P16520 340 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 RPA4Q13156 261 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 SRSF9Q13242 221 aaKnown RBP eCLIP4.55□□□□□ -1.68
SYNE2-210ENST00000553455 RPS6KA1Q15418 735 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 SGCBQ16585 318 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 KRTAP24-1Q3LI83 254 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 ZNF542PQ5EBM4 170 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 FFAR4Q5NUL3 377 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 LRRC38Q5VT99 294 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 PSRC1Q6PGN9 363 aaPredicted RBP4.55□□□□□ -1.68
SYNE2-210ENST00000553455 SIGLEC15Q6ZMC9 328 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 LACC1Q8IV20 430 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 GPC2Q8N158 579 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 DCLK2Q8N568 766 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 CNBD1Q8NA66 436 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 LPCAT1Q8NF37 534 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 OR5AP2Q8NGF4 316 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 MGARPQ8TDB4 240 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 RNASE8Q8TDE3 154 aaKnown RBP4.55□□□□□ -1.68
SYNE2-210ENST00000553455 GATAD1Q8WUU5 269 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 TMEM190Q8WZ59 177 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 SUSD6Q92537 303 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 CDKN2AIPNLQ96HQ2 116 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 CCDC43Q96MW1 224 aaKnown RBP4.55□□□□□ -1.68
SYNE2-210ENST00000553455 C17orf62Q9BQA9 187 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 ACAT2Q9BWD1 397 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 TBC1D13Q9NVG8 400 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 TRPC4Q9UBN4 977 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 TCF19Q9Y242 345 aa4.55□□□□□ -1.68
SYNE2-210ENST00000553455 A0A087WYN8 130 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 A0A087X0K7 114 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 TRBV4-1A0A0J9YWV2 114 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 C5orf51A6NDU8 294 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 DDX39AO00148 427 aaKnown RBP4.54□□□□□ -1.68
SYNE2-210ENST00000553455 PGRMC2O15173 223 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 CRCPO75575 148 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 OLFM2O95897 454 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 AMBPP02760 352 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 RAF1P04049 648 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 HMOX1P09601 288 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 KRT3P12035 628 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 SRD5A2P31213 254 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 CTNNB1P35222 781 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 CDKN1AP38936 164 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 LEPRP48357 1165 aaKnown RBP4.54□□□□□ -1.68
SYNE2-210ENST00000553455 SERPINH1P50454 418 aaKnown RBP4.54□□□□□ -1.68
SYNE2-210ENST00000553455 GNB1P62873 340 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 CSNK2BP67870 215 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 RPP38P78345 283 aaKnown RBP4.54□□□□□ -1.68
SYNE2-210ENST00000553455 KCNJ10P78508 379 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 SP3Q02447 781 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 CETN1Q12798 172 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 TRA2AQ13595 282 aaKnown RBP eCLIP4.54□□□□□ -1.68
SYNE2-210ENST00000553455 TEAD2Q15562 447 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 HFEQ30201 348 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 AGAP6Q5VW22 663 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 DHRS11Q6UWP2 260 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 FCRLAQ7L513 359 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 COX8CQ7Z4L0 72 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 CUZD1Q86UP6 607 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 CNTN4Q8IWV2 1026 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 ZC3H3Q8IXZ2 948 aaKnown RBP4.54□□□□□ -1.68
SYNE2-210ENST00000553455 FAM89BQ8N5H3 189 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 TMEM178AQ8NBL3 297 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 GPRC5AQ8NFJ5 357 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 SNX21Q969T3 373 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 F2RL3Q96RI0 385 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 ATP6V0BQ99437 205 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 FAM49AQ9H0Q0 323 aaPredicted RBP4.54□□□□□ -1.68
SYNE2-210ENST00000553455 P2RY12Q9H244 342 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 CUEDC2Q9H467 287 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 DBNDD1Q9H9R9 158 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 PDRG1Q9NUG6 133 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 PANK4Q9NVE7 773 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 DNAJC11Q9NVH1 559 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 RNF186Q9NXI6 227 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 FBXL4Q9UKA2 621 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 FBXW2Q9UKT8 454 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 ELF5Q9UKW6 265 aaPredicted RBP4.54□□□□□ -1.68
SYNE2-210ENST00000553455 NOTCH4Q99466 2003 aa4.54□□□□□ -1.68
SYNE2-210ENST00000553455 KIF5CO60282 957 aa4.53□□□□□ -1.68
SYNE2-210ENST00000553455 PNPP00491 289 aa4.53□□□□□ -1.68
SYNE2-210ENST00000553455 CHRNB4P30926 498 aa4.53□□□□□ -1.68
SYNE2-210ENST00000553455 OR3A3P47888 321 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms