RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ILF2Q12905 390 aaKnown RBP3.42□□□□□ -1.86
SCFD1-207ENST00000544052 FAM166AQ6J272 317 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 IL17RELQ6ZVW7 336 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 CCDC83Q8IWF9 413 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 RYBPQ8N488 228 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-207ENST00000544052 LMO3Q8TAP4 145 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 NUDCD2Q8WVJ2 157 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 SECTM1Q8WVN6 248 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 PYCR2Q96C36 320 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 PDLIM5Q96HC4 596 aaKnown RBP3.42□□□□□ -1.86
SCFD1-207ENST00000544052 COG3Q96JB2 828 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 URM1Q9BTM9 101 aaKnown RBP3.42□□□□□ -1.86
SCFD1-207ENST00000544052 LRRC1Q9BTT6 524 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 SRD5A3Q9H8P0 318 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 MID1IP1Q9NPA3 183 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 GSN-AS1Q9NRJ2 163 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 P4HTMQ9NXG6 502 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 AKAP7Q9P0M2 348 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-207ENST00000544052 LEF1Q9UJU2 399 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-207ENST00000544052 GMEB2Q9UKD1 530 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 CACNA1SQ13698 1873 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 KIF24Q5T7B8 1368 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 ANKRD31Q8N7Z5 1873 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 PLSCR5A0PG75 271 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 DDX39AO00148 427 aaKnown RBP3.42□□□□□ -1.86
SCFD1-207ENST00000544052 TTI1O43156 1089 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 DDHD2O94830 711 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 NTN1O95631 604 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 IGHV4-39P01824 125 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 NR3C1P04150 777 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 MYL6BP14649 208 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 CDX1P47902 265 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-207ENST00000544052 FMO5P49326 533 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 STX1BP61266 288 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 LGALS3BPQ08380 585 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 RPA4Q13156 261 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 HFEQ30201 348 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 NADSYN1Q6IA69 706 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 RBM23Q86U06 439 aaKnown RBP3.42□□□□□ -1.86
SCFD1-207ENST00000544052 AMIGO1Q86WK6 493 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 CROCCP3Q8IVE0 287 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 AQP12AQ8IXF9 295 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 KLHDC1Q8N7A1 406 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 ST7LQ8TDW4 575 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 SLC47A1Q96FL8 570 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 NAP1L5Q96NT1 182 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-207ENST00000544052 DDX31Q9H8H2 851 aaKnown RBP3.42□□□□□ -1.86
SCFD1-207ENST00000544052 EVA1AQ9H8M9 152 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 FKRPQ9H9S5 495 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 ZDHHC2Q9UIJ5 367 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 FBXL5Q9UKA1 691 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 KNSTRNQ9Y448 316 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 NRXN2Q9P2S2 1712 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 DLG5Q8TDM6 1919 aa3.41□□□□□ -1.86
SCFD1-207ENST00000544052 PALLDQ8WX93 1383 aa3.41□□□□□ -1.86
SCFD1-207ENST00000544052 ANKRD61A6NGH8 418 aa3.41□□□□□ -1.86
SCFD1-207ENST00000544052 H0YIG0 161 aa3.41□□□□□ -1.86
SCFD1-207ENST00000544052 SNX3O60493 162 aa3.41□□□□□ -1.86
SCFD1-207ENST00000544052 AKAP3O75969 853 aa3.41□□□□□ -1.86
SCFD1-207ENST00000544052 CDH3P22223 829 aa3.41□□□□□ -1.86
SCFD1-207ENST00000544052 DVL1P1P54792 670 aaPredicted RBP3.41□□□□□ -1.86
SCFD1-207ENST00000544052 SNU13P55769 128 aaKnown RBP3.41□□□□□ -1.86
SCFD1-207ENST00000544052 ITPK1Q13572 414 aa3.41□□□□□ -1.86
SCFD1-207ENST00000544052 IZUMO4Q1ZYL8 232 aa3.41□□□□□ -1.86
SCFD1-207ENST00000544052 CAPRIN2Q6IMN6 1127 aaKnown RBP3.41□□□□□ -1.86
SCFD1-207ENST00000544052 ANKRD33Q7Z3H0 272 aa3.41□□□□□ -1.86
SCFD1-207ENST00000544052 C4orf19Q8IY42 314 aa3.41□□□□□ -1.86
SCFD1-207ENST00000544052 CIARTQ8N365 385 aaPredicted RBP3.41□□□□□ -1.86
SCFD1-207ENST00000544052 KIAA0895Q8NCT3 520 aa3.41□□□□□ -1.86
SCFD1-207ENST00000544052 SLC24A4Q8NFF2 622 aa3.41□□□□□ -1.86
SCFD1-207ENST00000544052 NCOA7Q8NI08 942 aa3.41□□□□□ -1.86
SCFD1-207ENST00000544052 P2RX5Q93086 422 aa3.41□□□□□ -1.86
SCFD1-207ENST00000544052 CENPTQ96BT3 561 aa3.41□□□□□ -1.86
SCFD1-207ENST00000544052 NAF1Q96HR8 494 aaKnown RBP3.41□□□□□ -1.86
SCFD1-207ENST00000544052 OSBPL8Q9BZF1 889 aa3.41□□□□□ -1.86
SCFD1-207ENST00000544052 TLE6Q9H808 572 aa3.41□□□□□ -1.86
SCFD1-207ENST00000544052 POLKQ9UBT6 870 aa3.41□□□□□ -1.86
SCFD1-207ENST00000544052 STUB1Q9UNE7 303 aa3.41□□□□□ -1.86
SCFD1-207ENST00000544052 GPR132Q9UNW8 380 aa3.41□□□□□ -1.86
SCFD1-207ENST00000544052 TRIM17Q9Y577 477 aa3.41□□□□□ -1.86
SCFD1-207ENST00000544052 ADCY9O60503 1353 aa3.41□□□□□ -1.86
SCFD1-207ENST00000544052 MRC1P22897 1456 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 SDR42E2A6NKP2 422 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 CAPN9O14815 690 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 XPNPEP2O43895 674 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 RTN2O75298 545 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 PIGNO95427 931 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 DLATP10515 647 aaKnown RBP3.4□□□□□ -1.86
SCFD1-207ENST00000544052 DARSP14868 501 aaKnown RBP3.4□□□□□ -1.86
SCFD1-207ENST00000544052 EPORP19235 508 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 CA4P22748 312 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 CTNNB1P35222 781 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 MAGEB1P43366 347 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 RPL21P46778 160 aaKnown RBP3.4□□□□□ -1.86
SCFD1-207ENST00000544052 THBS3P49746 956 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 VAMP7P51809 220 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 GAS1P54826 345 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 PITX1P78337 314 aaPredicted RBP3.4□□□□□ -1.86
SCFD1-207ENST00000544052 GCNT1Q02742 428 aa3.4□□□□□ -1.86
SCFD1-207ENST00000544052 PKN2Q16513 984 aaKnown RBP3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms