RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	CDH20	Q9HBT6	801 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	OSER1	Q9NX31	292 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	BAIAP2	Q9UQB8	552 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	MRPL42	Q9Y6G3	142 aa	Known RBP	10.03	□□□□□ -0.8
TCF7-223	ENST00000522653		A0A1W2PP55	124 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	SLC22A2	O15244	555 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	PMM2	O15305	246 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	ITM2A	O43736	263 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	NRP2	O60462	931 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	AFF3	P51826	1226 aa	Known RBP	10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	EPHA4	P54764	986 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	BNIP3	Q12983	259 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	GTF2H2	Q13888	395 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	FASTKD3	Q14CZ7	662 aa	Known RBP	10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	NOMO1	Q15155	1222 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	RBM20	Q5T481	1227 aa	Known RBP	10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	KIAA0930	Q6ICG6	404 aa	Predicted RBP	10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	GTF2H2C	Q6P1K8	395 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	C14orf80	Q86SX3	495 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	ASPG	Q86U10	573 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	HIPK1	Q86Z02	1210 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	ZNF222	Q9UK12	451 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	PRKAB1	Q9Y478	270 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	BUD23	O43709	281 aa	Known RBP	10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	CDC40	O60508	579 aa	Known RBP eCLIP	10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	PIAS1	O75925	651 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	CST1	P01037	141 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	DDC	P20711	480 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	CDH15	P55291	814 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	ECM1	Q16610	540 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	TMEM201	Q5SNT2	666 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	RBMS3	Q6XE24	437 aa	Known RBP	10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	OR9A1P	Q8NGU1	263 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	GOT1L1	Q8NHS2	421 aa	Predicted RBP	10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	ZNF420	Q8TAQ5	688 aa	Predicted RBP	10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	PDCD10	Q9BUL8	212 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	MED31	Q9Y3C7	131 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	PCDHGC4	Q9Y5F7	938 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	TSPAN4	O14817	238 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	PRKD3	O94806	890 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	NCBP2	P52298	156 aa	Known RBP eCLIP	10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	UCN	P55089	124 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	ECH1	Q13011	328 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	LRP10	Q7Z4F1	713 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	PACRGL	Q8N7B6	248 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	RNF19A	Q9NV58	838 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	POLR3B	Q9NW08	1133 aa	Predicted RBP	10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	TMEM248	Q9NWD8	314 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	TMEM5	Q9Y2B1	443 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	PAPSS2	O95340	614 aa	Predicted RBP	10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	GPI	P06744	558 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	MAG	P20916	626 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	SMS	P52788	366 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	BTN3A2	P78410	334 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	NPTX1	Q15818	432 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	CA9	Q16790	459 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	TIGD6	Q17RP2	521 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	SFT2D3	Q587I9	215 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	SLC30A6	Q6NXT4	461 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	S100A7A	Q86SG5	101 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	MRPL43	Q8N983	215 aa	Known RBP	10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	OR8H1	Q8NGG4	311 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	MUCL1	Q96DR8	90 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	LENG8	Q96PV6	779 aa	Predicted RBP	10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	EVA1A	Q9H8M9	152 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	FZD3	Q9NPG1	666 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	ADAMTS5	Q9UNA0	930 aa		10.03	□□□□□ -0.8
TCF7-223	ENST00000522653	TCRBV7S2A1N4T	A0A589	114 aa		10.02	□□□□□ -0.8
TCF7-223	ENST00000522653	SLC22A1	O15245	554 aa		10.02	□□□□□ -0.8
TCF7-223	ENST00000522653	PEX10	O60683	326 aa		10.02	□□□□□ -0.8
TCF7-223	ENST00000522653	SLC22A3	O75751	556 aa		10.02	□□□□□ -0.8
TCF7-223	ENST00000522653	PGC	P20142	388 aa		10.02	□□□□□ -0.8
TCF7-223	ENST00000522653	PTP4A2	Q12974	167 aa		10.02	□□□□□ -0.8
TCF7-223	ENST00000522653	ZBTB6	Q15916	424 aa		10.02	□□□□□ -0.8
TCF7-223	ENST00000522653	LPAL2	Q16609	132 aa		10.02	□□□□□ -0.8
TCF7-223	ENST00000522653	OLFML2A	Q68BL7	652 aa		10.02	□□□□□ -0.8
TCF7-223	ENST00000522653	BPHL	Q86WA6	291 aa	Predicted RBP	10.02	□□□□□ -0.8
TCF7-223	ENST00000522653	C12orf76	Q8N812	135 aa	Predicted RBP	10.02	□□□□□ -0.8
TCF7-223	ENST00000522653	C12orf43	Q96C57	262 aa	Known RBP	10.02	□□□□□ -0.8
TCF7-223	ENST00000522653	TPSD1	Q9BZJ3	242 aa		10.02	□□□□□ -0.8
TCF7-223	ENST00000522653	CMTM6	Q9NX76	183 aa		10.02	□□□□□ -0.8
TCF7-223	ENST00000522653	TAS2R9	Q9NYW1	312 aa		10.02	□□□□□ -0.8
TCF7-223	ENST00000522653	FBXO9	Q9UK97	447 aa	Predicted RBP	10.02	□□□□□ -0.8
TCF7-223	ENST00000522653	IKZF3	Q9UKT9	509 aa		10.02	□□□□□ -0.8
TCF7-223	ENST00000522653		G3V2T6	193 aa		10.02	□□□□□ -0.81
TCF7-223	ENST00000522653		M0R129	80 aa		10.02	□□□□□ -0.81
TCF7-223	ENST00000522653	ERI3	O43414	337 aa	Known RBP	10.02	□□□□□ -0.81
TCF7-223	ENST00000522653	UGT2B11	O75310	529 aa		10.02	□□□□□ -0.81
TCF7-223	ENST00000522653	USP12	O75317	370 aa		10.02	□□□□□ -0.81
TCF7-223	ENST00000522653	THRB	P10828	461 aa		10.02	□□□□□ -0.81
TCF7-223	ENST00000522653	MMP8	P22894	467 aa		10.02	□□□□□ -0.81
TCF7-223	ENST00000522653	MC3R	P41968	323 aa		10.02	□□□□□ -0.81
TCF7-223	ENST00000522653	VLDLR	P98155	873 aa		10.02	□□□□□ -0.81
TCF7-223	ENST00000522653	SCRN3	Q0VDG4	424 aa		10.02	□□□□□ -0.81
TCF7-223	ENST00000522653	TSC22D1	Q15714	1073 aa		10.02	□□□□□ -0.81
TCF7-223	ENST00000522653	PLEKHG4	Q58EX7	1191 aa		10.02	□□□□□ -0.81
TCF7-223	ENST00000522653	CLEC20A	Q6ZU45	233 aa		10.02	□□□□□ -0.81
TCF7-223	ENST00000522653	MRPL10	Q7Z7H8	261 aa	Known RBP	10.02	□□□□□ -0.81
TCF7-223	ENST00000522653	NRROS	Q86YC3	692 aa		10.02	□□□□□ -0.81
TCF7-223	ENST00000522653	SDR16C5	Q8N3Y7	309 aa		10.02	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms