RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 FOXL2NBQ6ZUU3 175 aa4.25□□□□□ -1.73
MBD4-209ENST00000511009 NFE4Q86UQ8 179 aa4.25□□□□□ -1.73
MBD4-209ENST00000511009 LAX1Q8IWV1 398 aa4.25□□□□□ -1.73
MBD4-209ENST00000511009 GBP7Q8N8V2 638 aaPredicted RBP4.25□□□□□ -1.73
MBD4-209ENST00000511009 CCNYQ8ND76 341 aa4.25□□□□□ -1.73
MBD4-209ENST00000511009 OR7A2PQ8NGA2 310 aa4.25□□□□□ -1.73
MBD4-209ENST00000511009 PIK3R3Q92569 461 aa4.25□□□□□ -1.73
MBD4-209ENST00000511009 GGHQ92820 318 aa4.25□□□□□ -1.73
MBD4-209ENST00000511009 LYZL4Q96KX0 146 aa4.25□□□□□ -1.73
MBD4-209ENST00000511009 C4orf45Q96LM5 186 aa4.25□□□□□ -1.73
MBD4-209ENST00000511009 FAM111AQ96PZ2 611 aa4.25□□□□□ -1.73
MBD4-209ENST00000511009 CDCA3Q99618 268 aaPredicted RBP4.25□□□□□ -1.73
MBD4-209ENST00000511009 PRMT1Q99873 361 aaKnown RBP4.25□□□□□ -1.73
MBD4-209ENST00000511009 PKP2Q99959 881 aa4.25□□□□□ -1.73
MBD4-209ENST00000511009 HIPK2Q9H2X6 1198 aa4.25□□□□□ -1.73
MBD4-209ENST00000511009 DONSONQ9NYP3 566 aa4.25□□□□□ -1.73
MBD4-209ENST00000511009 NINJ2Q9NZG7 142 aa4.25□□□□□ -1.73
MBD4-209ENST00000511009 FLRT3Q9NZU0 649 aa4.25□□□□□ -1.73
MBD4-209ENST00000511009 IL36AQ9UHA7 158 aa4.25□□□□□ -1.73
MBD4-209ENST00000511009 UBQLN2Q9UHD9 624 aa4.25□□□□□ -1.73
MBD4-209ENST00000511009 MAN1B1Q9UKM7 699 aa4.25□□□□□ -1.73
MBD4-209ENST00000511009 TSPAN16Q9UKR8 245 aa4.25□□□□□ -1.73
MBD4-209ENST00000511009 KCNJ14Q9UNX9 436 aa4.25□□□□□ -1.73
MBD4-209ENST00000511009 FOXA2Q9Y261 457 aaPredicted RBP4.25□□□□□ -1.73
MBD4-209ENST00000511009 CCDC162PA2VCL2 907 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 ARHGAP42A6NI28 874 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 H3BMM5 538 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 SMAD6O43541 496 aaKnown RBP4.24□□□□□ -1.73
MBD4-209ENST00000511009 DFFBO76075 338 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 RAF1P04049 648 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 ATP1B1P05026 303 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 YES1P07947 543 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 SNHG28P0DPA3 235 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 AREGP15514 252 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 AMD1P17707 334 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 CEACAM8P31997 349 aaPredicted RBP4.24□□□□□ -1.73
MBD4-209ENST00000511009 LBX1P52954 281 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 ATXN3P54252 364 aaPredicted RBP4.24□□□□□ -1.73
MBD4-209ENST00000511009 HUNKP57058 714 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 TRA2AQ13595 282 aaKnown RBP eCLIP4.24□□□□□ -1.73
MBD4-209ENST00000511009 KEAP1Q14145 624 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 RBM39Q14498 530 aaKnown RBP4.24□□□□□ -1.73
MBD4-209ENST00000511009 CCDC40Q4G0X9 1142 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 PDLIM3Q53GG5 364 aaPredicted RBP4.24□□□□□ -1.73
MBD4-209ENST00000511009 DNAJC21Q5F1R6 531 aaKnown RBP4.24□□□□□ -1.73
MBD4-209ENST00000511009 SLC25A53Q5H9E4 307 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 TECRLQ5HYJ1 363 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 FGD3Q5JSP0 725 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 UGT3A1Q6NUS8 523 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 MFSD7Q6UXD7 560 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 B3GLCTQ6Y288 498 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 FAM43BQ6ZT52 329 aaPredicted RBP4.24□□□□□ -1.73
MBD4-209ENST00000511009 TDHQ8IZJ6 230 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 ZNF444Q8N0Y2 327 aaPredicted RBP4.24□□□□□ -1.73
MBD4-209ENST00000511009 MRPL43Q8N983 215 aaKnown RBP4.24□□□□□ -1.73
MBD4-209ENST00000511009 KIAA1524Q8TCG1 905 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 DTD2Q96FN9 168 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 MEIS3Q99687 375 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 TSPYL1Q9H0U9 437 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 ABCG4Q9H172 646 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 EXOC1Q9NV70 894 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.24□□□□□ -1.73
MBD4-209ENST00000511009 CCPG1Q9ULG6 757 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 GRID1Q9ULK0 1009 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 TMED7Q9Y3B3 224 aa4.24□□□□□ -1.73
MBD4-209ENST00000511009 CACNA1IQ9P0X4 2223 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 NISCHQ9Y2I1 1504 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 TRBV5-5A0A0J9YX44 114 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 TMEM129A0AVI4 362 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 ANTXRLA6NF34 631 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 SLC15A5A6NIM6 579 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 C2CD4DB7Z1M9 353 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 TLR4O00206 839 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 MAGEB2O15479 319 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 PSMD3O43242 534 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 CIDEAO60543 219 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 GLRA3O75311 464 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 PRKAR1AP10644 381 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 PLA2G2AP14555 144 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 ARF4P18085 180 aaPredicted RBP4.23□□□□□ -1.73
MBD4-209ENST00000511009 NR1D1P20393 614 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 ELAVL4P26378 380 aaKnown RBP4.23□□□□□ -1.73
MBD4-209ENST00000511009 SFNP31947 248 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 HPDP32754 393 aaPredicted RBP4.23□□□□□ -1.73
MBD4-209ENST00000511009 DUTP33316 252 aaKnown RBP4.23□□□□□ -1.73
MBD4-209ENST00000511009 RABIFP47224 123 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 GMFBP60983 142 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 POLR2FP61218 127 aaKnown RBP4.23□□□□□ -1.73
MBD4-209ENST00000511009 CDR2Q01850 454 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 TRIM29Q14134 588 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 ACCSLQ4AC99 568 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 LCE1AQ5T7P2 110 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 GDPD4Q6W3E5 623 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 MACC1Q6ZN28 852 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 SLC24A5Q71RS6 500 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 ADCK1Q86TW2 530 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 KDM8Q8N371 416 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 LEMD2Q8NC56 503 aa4.23□□□□□ -1.73
MBD4-209ENST00000511009 SLC37A3Q8NCC5 494 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms