RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 TM4SF19Q96DZ7 209 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 SPSB2Q99619 263 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 SARGQ9BW04 601 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 FUT8Q9BYC5 575 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 ALG9Q9H6U8 611 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 PRM3Q9NNZ6 103 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 DNAJC11Q9NVH1 559 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 GPRC5BQ9NZH0 403 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 ZFP69BQ9UJL9 534 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 ANAPC2Q9UJX6 822 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 ZNF451Q9Y4E5 1061 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 MAP4K5Q9Y4K4 846 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 PCDHGB7Q9Y5F8 929 aa13.57□□□□□ -0.24
BRCA1-218ENST00000489037 CCDC189A1A4V9 331 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 SYCE1LA8MT33 242 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 SUPT3HB4E1H0 165 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 POC1B-GALNT4F8VUJ3 575 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 NDUFS4O43181 175 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 FOXS1O43638 330 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 SUPT3HO75486 399 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 KRT38O76015 456 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 C2P06681 752 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 HEXBP07686 556 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 C1GALT1C1LP0DN25 315 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 CNTFP26441 200 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 GGT5P36269 586 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 GDF5P43026 501 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 SLC6A12P48065 614 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 HSPA7P48741 367 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 EMP2P54851 167 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 REEP5Q00765 189 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 KLC1Q07866 573 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 KLRB1Q12918 225 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 HERC3Q15034 1050 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 VWA2Q5GFL6 755 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 DCAF10Q5QP82 559 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 LGSNQ5TDP6 509 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 TMEM214Q6NUQ4 689 aaKnown RBP13.56□□□□□ -0.24
BRCA1-218ENST00000489037 TRMT10CQ7L0Y3 403 aaKnown RBP13.56□□□□□ -0.24
BRCA1-218ENST00000489037 SNX31Q8N9S9 440 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 PDPRQ8NCN5 879 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 TTLQ8NG68 377 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 OR9A4Q8NGU2 314 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 ZCCHC10Q8TBK6 192 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 SLC44A1Q8WWI5 657 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 MACROD1Q9BQ69 325 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 VPS11Q9H270 941 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 SYNPO2LQ9H987 977 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 SNX15Q9NRS6 342 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 GPR83Q9NYM4 423 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 NUDT4Q9NZJ9 180 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 C3orf18Q9UK00 162 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 SLC22A7Q9Y694 548 aa13.56□□□□□ -0.24
BRCA1-218ENST00000489037 CNTRLQ7Z7A1 2325 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 IGLV3-12A0A075B6K2 115 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 A0A096LPK6 155 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 MAP2K7O14733 419 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 PCDH17O14917 1159 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 CCNT2O60583 730 aaKnown RBP13.55□□□□□ -0.24
BRCA1-218ENST00000489037 KERAO60938 352 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 ALPPP05187 535 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 IL1RNP18510 177 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 ECHS1P30084 290 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 SCTRP47872 440 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 FOXL2P58012 376 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 AIMP2Q13155 320 aaKnown RBP13.55□□□□□ -0.24
BRCA1-218ENST00000489037 ACAP2Q15057 778 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 HIST2H2ACQ16777 129 aaPredicted RBP13.55□□□□□ -0.24
BRCA1-218ENST00000489037 C18orf21Q32NC0 220 aaPredicted RBP13.55□□□□□ -0.24
BRCA1-218ENST00000489037 TUBB8Q3ZCM7 444 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 MFSD4BQ5TF39 518 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 ATG9BQ674R7 924 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 HIST2H2AA3Q6FI13 130 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 ABHD13Q7L211 337 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 ISCA2Q86U28 154 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 HPS6Q86YV9 775 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 ARHGEF39Q8N4T4 335 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 KCT2Q8NC54 265 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 UHMK1Q8TAS1 419 aaKnown RBP13.55□□□□□ -0.24
BRCA1-218ENST00000489037 KCTD4Q8WVF5 259 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 NXNL1Q96CM4 212 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 PAFAH2Q99487 392 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 TGIF2Q9GZN2 237 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 PITHD1Q9GZP4 211 aaPredicted RBP13.55□□□□□ -0.24
BRCA1-218ENST00000489037 FBXL4Q9UKA2 621 aa13.55□□□□□ -0.24
BRCA1-218ENST00000489037 PTBP2Q9UKA9 531 aaKnown RBP13.55□□□□□ -0.24
BRCA1-218ENST00000489037 SMG1Q96Q15 3661 aaKnown RBP13.55□□□□□ -0.24
BRCA1-218ENST00000489037 EXOC1LA0A1B0GW35 172 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 IDSB3KWA1 339 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 FFAR3O14843 346 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 GPR42O15529 346 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 TAPBPO15533 448 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 SUV39H1O43463 412 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 CEACAM4O75871 244 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 KLHL2O95198 593 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 ACPPP15309 386 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 ITGA3P26006 1051 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 GSTM2P28161 218 aa13.54□□□□□ -0.24
BRCA1-218ENST00000489037 HPDP32754 393 aaPredicted RBP13.54□□□□□ -0.24
BRCA1-218ENST00000489037 DLG1Q12959 904 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms