RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 CXXC1Q9P0U4 656 aaPredicted RBP10.24□□□□□ -0.77
APLF-204ENST00000471727 FAM8A1Q9UBU6 413 aa10.24□□□□□ -0.77
APLF-204ENST00000471727 TMEFF2Q9UIK5 374 aaPredicted RBP10.24□□□□□ -0.77
APLF-204ENST00000471727 FZD4Q9ULV1 537 aa10.24□□□□□ -0.77
APLF-204ENST00000471727 TPRKBQ9Y3C4 175 aa10.24□□□□□ -0.77
APLF-204ENST00000471727 PCDHGB1Q9Y5G3 927 aa10.24□□□□□ -0.77
APLF-204ENST00000471727 PCDHGA8Q9Y5G5 932 aa10.24□□□□□ -0.77
APLF-204ENST00000471727 MAGED1Q9Y5V3 778 aaPredicted RBP10.24□□□□□ -0.77
APLF-204ENST00000471727 HCFC2Q9Y5Z7 792 aa10.24□□□□□ -0.77
APLF-204ENST00000471727 BCKDKO14874 412 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 SPINT1O43278 529 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 SUV39H1O43463 412 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 GPR37L1O60883 481 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 JRKO75564 520 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 IFNA14P01570 189 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 CDK4P11802 303 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 ITIH1P19827 911 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 ELK4P28324 431 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 ACADLP28330 430 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 PBLDP30039 288 aaPredicted RBP10.23□□□□□ -0.77
APLF-204ENST00000471727 GSTM5P46439 218 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 IST1P53990 364 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 ITGA1P56199 1179 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 HTRA3P83110 453 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 CD47Q08722 323 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 FCHO2Q0JRZ9 810 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 PDE7AQ13946 482 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 CYP2A13Q16696 494 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 KDM4DQ6B0I6 523 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 ADAMTSL4Q6UY14 1074 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 LRRC56Q8IYG6 542 aaPredicted RBP10.23□□□□□ -0.77
APLF-204ENST00000471727 CHPFQ8IZ52 775 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 C10orf111Q8N326 155 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 LILRA3Q8N6C8 439 aaPredicted RBP10.23□□□□□ -0.77
APLF-204ENST00000471727 OR52N2Q8NGI0 321 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 CDC26Q8NHZ8 85 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 BADQ92934 168 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 LRRC3BQ96PB8 259 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 ZNF347Q96SE7 839 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 FAM129BQ96TA1 746 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 EPYCQ99645 322 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 CHST8Q9H2A9 424 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 TMEM245Q9H330 911 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 REEP1Q9H902 201 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 PLGRKTQ9HBL7 147 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 DMRT3Q9NQL9 472 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 SCN3BQ9NY72 215 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 SH3BP4Q9P0V3 963 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 FAF1Q9UNN5 650 aaPredicted RBP10.23□□□□□ -0.77
APLF-204ENST00000471727 PADI2Q9Y2J8 665 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 NAALAD2Q9Y3Q0 740 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 PCDHGB3Q9Y5G1 929 aa10.23□□□□□ -0.77
APLF-204ENST00000471727 PIPSLA2A3N6 862 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 GPR89AB7ZAQ6 455 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 PRRT4C9JH25 899 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 TBX19O60806 448 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 SEMA3DO95025 777 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 ETHE1O95571 254 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 KRT75O95678 551 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 C9P02748 559 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 GPR89BP0CG08 455 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 ITGA2P17301 1181 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 CCNA2P20248 432 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 RPL10P27635 214 aaKnown RBP10.22□□□□□ -0.77
APLF-204ENST00000471727 TEAD1P28347 426 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 SLC14A1Q13336 389 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 CAMK2GQ13555 558 aaPredicted RBP10.22□□□□□ -0.77
APLF-204ENST00000471727 CAMK1Q14012 370 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 STARD3Q14849 445 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 NEDD8Q15843 81 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 HKDC1Q2TB90 917 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 POM121L1PQ3SYA9 428 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 GPR107Q5VW38 600 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 FAM71E1Q6IPT2 247 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 TRIM40Q6P9F5 258 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 NUDT18Q6ZVK8 323 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 COMMD6Q7Z4G1 85 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 ARHGAP22Q7Z5H3 698 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 TMEM179BQ7Z7N9 219 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 TSPYL5Q86VY4 417 aaPredicted RBP10.22□□□□□ -0.77
APLF-204ENST00000471727 C12orf40Q86WS4 652 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 DCUN1D3Q8IWE4 304 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 CLECL1Q8IZS7 167 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 SPARTQ8N0X7 666 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 RNF175Q8N4F7 328 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 OXR1Q8N573 874 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 OR4A15Q8NGL6 344 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 GAB3Q8WWW8 586 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 SUSD6Q92537 303 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 SMARCD2Q92925 531 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 THAP11Q96EK4 314 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 COX14Q96I36 57 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 HSH2DQ96JZ2 352 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 QRFPRQ96P65 431 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 DOHHQ9BU89 302 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 TMEM38AQ9H6F2 299 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 NT5DC2Q9H857 520 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 GPN2Q9H9Y4 310 aaPredicted RBP10.22□□□□□ -0.77
APLF-204ENST00000471727 PELI2Q9HAT8 420 aa10.22□□□□□ -0.77
APLF-204ENST00000471727 FANCEQ9HB96 536 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms