RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 MTG2Q9H4K7 406 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 GPRC5BQ9NZH0 403 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 CXCL14O95715 111 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 HLA-DPB1P04440 258 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 SFTPBP07988 381 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 CD97P48960 835 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 ZNF616Q08AN1 781 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 DSG2Q14126 1118 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 RPL13AP3Q6NVV1 102 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 DCDC5Q6ZRR9 648 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 OR7D4Q8NG98 312 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 ELP5Q8TE02 316 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 TMEM80Q96HE8 168 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 COL21A1Q96P44 957 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 VRK1Q99986 396 aaPredicted RBP12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 HEPHQ9BQS7 1158 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 ARHGAP9Q9BRR9 750 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 NUSAP1Q9BXS6 441 aaKnown RBP12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 LGALS2P05162 132 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 CD79BP40259 229 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 HSPA7P48741 367 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 HSD17B7P56937 341 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 ERVK-8P63133 956 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 ERVK-25P63136 954 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 PLA2G15Q8NCC3 412 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 OR51D1Q8NGF3 324 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 GEMIN6Q8WXD5 167 aaKnown RBP12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 SLC35G5Q96KT7 338 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 CMKLR1Q99788 373 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 UQCC2Q9BRT2 126 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 LHX5Q9H2C1 402 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 PRMT8Q9NR22 394 aaPredicted RBP12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 CDH10Q9Y6N8 788 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 ANKRD63C9JTQ0 380 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 LATS1O95835 1130 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 PAK4O96013 591 aaPredicted RBP12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 SCNN1AP37088 669 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 SMSP52788 366 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 WNT3AP56704 352 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 ZNF280BQ86YH2 543 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 NETO2Q8NC67 525 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 MAPKAP1Q9BPZ7 522 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 ASTN1O14525 1302 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 ZNF254O75437 659 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 CDK14O94921 469 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 TSPAN15O95858 294 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 MZT1Q08AG7 82 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 OR2T5Q6IEZ7 315 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 CCBE1Q6UXH8 406 aaPredicted RBP12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 BAIAP2L2Q6UXY1 529 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 JAGN1Q8N5M9 183 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 OR2T29Q8NH02 315 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 PPTC7Q8NI37 304 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 SMARCD2Q92925 531 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 RGMAQ96B86 450 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 TREHO43280 583 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 EFNA1P20827 205 aaPredicted RBP12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 MAP2K3P46734 347 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 SOX9P48436 509 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 PSMD8P48556 350 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 FXYD6P3P58550 94 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 SP3Q02447 781 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 FOXR2Q6PJQ5 311 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 LGI4Q8N135 537 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 CPT1BQ92523 772 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 C19orf12Q9NSK7 152 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 PAK1IP1Q9NWT1 392 aaPredicted RBP12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 SNAP29O95721 258 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 FOXK1P85037 733 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 PLEKHG7Q6ZR37 379 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 GPR151Q8TDV0 419 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 FAXDC2Q96IV6 333 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 ZNF641Q96N77 438 aaPredicted RBP12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 NIFKQ9BYG3 293 aaKnown RBP12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 SCN8AQ9UQD0 1980 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 SULT1B1O43704 296 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 OR1F1O43749 312 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 MLLT3P42568 568 aaPredicted RBP12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 RHBDL3P58872 404 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 CHIT1Q13231 466 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 HYLS1Q96M11 299 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 GPR20Q99678 358 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 PDCD2LQ9BRP1 358 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 ABCB8Q9NUT2 735 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 COPZ2Q9P299 210 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 J3QLW9 94 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 EEF1E1O43324 174 aaKnown RBP12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 RAD51DO75771 328 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 H2AFB2P0C5Z0 115 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 ZNF19P17023 458 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 ELK4P28324 431 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 RASGRP3Q8IV61 690 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 CYP2W1Q8TAV3 490 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 KCTD13Q8WZ19 329 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 OSBPL2Q9H1P3 480 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 FN3KQ9H479 309 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 OR2S2Q9NQN1 319 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 ASB6Q9NWX5 421 aa12.84□□□□□ -0.35
SRGAP3-201ENST00000360413 ZNF705GA8MUZ8 300 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms