RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 ACPPP15309 386 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 PRKCAP17252 672 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 AMD1P17707 334 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 ETV6P41212 452 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 RFX2P48378 723 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 SEMG2Q02383 582 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 DSC1Q08554 894 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 SLAMF1Q13291 335 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 NFATC2Q13469 925 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 TAB1Q15750 504 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 BAK1Q16611 211 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 ERICH5Q6P6B1 374 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 SKA2Q8WVK7 121 aaPredicted RBP17.16■□□□□ 0.34
VHL-202ENST00000345392 FAM193BQ96PV7 902 aaPredicted RBP17.16■□□□□ 0.34
VHL-202ENST00000345392 MGLLQ99685 303 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 CNPPD1Q9BV87 410 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 BEX2Q9BXY8 128 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 MMP28Q9H239 520 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 NPAP1Q9NZP6 1156 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 OGDHLQ9ULD0 1010 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 FCF1Q9Y324 198 aaKnown RBP17.16■□□□□ 0.34
VHL-202ENST00000345392 PCDHGA2Q9Y5H1 932 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 CFAP20Q9Y6A4 193 aaKnown RBP17.16■□□□□ 0.34
VHL-202ENST00000345392 PLXNA3P51805 1871 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.16■□□□□ 0.34
VHL-202ENST00000345392 TMEM229AB2RXF0 380 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 ARHGAP33O14559 1287 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 LAMP1P11279 417 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 CCND3P30281 292 aaPredicted RBP17.16■□□□□ 0.34
VHL-202ENST00000345392 TGM4P49221 684 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 SMARCB1Q12824 385 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 ZNF177Q13360 481 aaPredicted RBP17.16■□□□□ 0.34
VHL-202ENST00000345392 MBTPS1Q14703 1052 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 CCDC58Q4VC31 144 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 ARMC4Q5T2S8 1044 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 MLIPQ5VWP3 458 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 NCEH1Q6PIU2 408 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 PAF1Q8N7H5 531 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 OR9Q2Q8NGE9 314 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 VANGL1Q8TAA9 524 aaPredicted RBP17.16■□□□□ 0.34
VHL-202ENST00000345392 UBTD2Q8WUN7 234 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 SH3KBP1Q96B97 665 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 CMTM7Q96FZ5 175 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 PHOX2BQ99453 314 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 RAD9AQ99638 391 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 IL26Q9NPH9 171 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 IMPAD1Q9NX62 359 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 NDUFAF4Q9P032 175 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 DUSP12Q9UNI6 340 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 KLK4Q9Y5K2 254 aa17.16■□□□□ 0.34
VHL-202ENST00000345392 MTMR11A4FU01 709 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 PRAMEF4O60810 478 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 GPX5O75715 221 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 CDH12P55289 794 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 PRAMEF9Q5VWM5 478 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 NEK5Q6P3R8 708 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 IFNL1Q8IU54 200 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 FAM217AQ8IXS0 508 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 SYNPOQ8N3V7 929 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 OR7G1Q8NGA0 311 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 GPR151Q8TDV0 419 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 MCCC1Q96RQ3 725 aaPredicted RBP17.15■□□□□ 0.34
VHL-202ENST00000345392 TM6SF2Q9BZW4 377 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 CFL2Q9Y281 166 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 TNFRSF10AO00220 468 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 SLITRK5O94991 958 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 CHRNB1P11230 501 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 GABRB1P18505 474 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 DAB2P98082 770 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 MTAPQ13126 283 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 FAM214AQ32MH5 1076 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 ATCAYQ86WG3 371 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 RAB43Q86YS6 212 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 WBP2Q969T9 261 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 CCDC32Q9BV29 185 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 TIGARQ9NQ88 270 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 CRLS1Q9UJA2 301 aa17.15■□□□□ 0.34
VHL-202ENST00000345392 ADAMTS4O75173 837 aa17.14■□□□□ 0.34
VHL-202ENST00000345392 CLDN7O95471 211 aa17.14■□□□□ 0.34
VHL-202ENST00000345392 IGHA2P01877 340 aa17.14■□□□□ 0.34
VHL-202ENST00000345392 RPL17P18621 184 aaKnown RBP17.14■□□□□ 0.34
VHL-202ENST00000345392 ITPKAP23677 461 aa17.14■□□□□ 0.34
VHL-202ENST00000345392 RPS19P39019 145 aaKnown RBP17.14■□□□□ 0.34
VHL-202ENST00000345392 CSTF3Q12996 717 aaKnown RBP17.14■□□□□ 0.34
VHL-202ENST00000345392 CRHR2Q13324 411 aa17.14■□□□□ 0.34
VHL-202ENST00000345392 IRF5Q13568 498 aa17.14■□□□□ 0.34
VHL-202ENST00000345392 PRSS55Q6UWB4 352 aaPredicted RBP17.14■□□□□ 0.34
VHL-202ENST00000345392 TMEM173Q86WV6 379 aaPredicted RBP17.14■□□□□ 0.34
VHL-202ENST00000345392 FYTTD1Q96QD9 318 aaKnown RBP17.14■□□□□ 0.34
VHL-202ENST00000345392 HHIPQ96QV1 700 aa17.14■□□□□ 0.34
VHL-202ENST00000345392 BBS2Q9BXC9 721 aa17.14■□□□□ 0.34
VHL-202ENST00000345392 TRPV5Q9NQA5 729 aa17.14■□□□□ 0.34
VHL-202ENST00000345392 KCNE1BA0A087WTH5 132 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 MEIOCA2RUB1 952 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 MANSC4A6NHS7 340 aaPredicted RBP17.14■□□□□ 0.33
VHL-202ENST00000345392 GCM2O75603 506 aaPredicted RBP17.14■□□□□ 0.33
VHL-202ENST00000345392 KLKB1P03952 638 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 ABCB1P08183 1280 aaPredicted RBP17.14■□□□□ 0.33
VHL-202ENST00000345392 PRPS1L1P21108 318 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 RPS3P23396 243 aaKnown RBP eCLIP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms