RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 NEURL2Q9BR09 285 aa24.42■■□□□ 1.5
HOXB3-201ENST00000311626 CPEB1Q9BZB8 566 aaKnown RBP24.42■■□□□ 1.5
HOXB3-201ENST00000311626 PCDHGB1Q9Y5G3 927 aa24.42■■□□□ 1.5
HOXB3-201ENST00000311626 CD97P48960 835 aa24.42■■□□□ 1.5
HOXB3-201ENST00000311626 CSTF3Q12996 717 aaKnown RBP24.42■■□□□ 1.5
HOXB3-201ENST00000311626 SP140Q13342 867 aa24.42■■□□□ 1.5
HOXB3-201ENST00000311626 RGNQ15493 299 aa24.42■■□□□ 1.5
HOXB3-201ENST00000311626 TTC23LQ6PF05 361 aa24.42■■□□□ 1.5
HOXB3-201ENST00000311626 OR7G3Q8NG95 312 aa24.42■■□□□ 1.5
HOXB3-201ENST00000311626 ZNF300Q96RE9 604 aaPredicted RBP24.42■■□□□ 1.5
HOXB3-201ENST00000311626 COL4A6Q14031 1691 aa24.42■■□□□ 1.5
HOXB3-201ENST00000311626 EIF3FO00303 357 aaPredicted RBP24.41■■□□□ 1.5
HOXB3-201ENST00000311626 SUV39H1O43463 412 aa24.41■■□□□ 1.5
HOXB3-201ENST00000311626 ATP6V1G1O75348 118 aa24.41■■□□□ 1.5
HOXB3-201ENST00000311626 PABPC1P11940 636 aaKnown RBP24.41■■□□□ 1.5
HOXB3-201ENST00000311626 CDH3P22223 829 aa24.41■■□□□ 1.5
HOXB3-201ENST00000311626 ITGA1P56199 1179 aa24.41■■□□□ 1.5
HOXB3-201ENST00000311626 NOGQ13253 232 aa24.41■■□□□ 1.5
HOXB3-201ENST00000311626 TMPRSS11BQ86T26 416 aa24.41■■□□□ 1.5
HOXB3-201ENST00000311626 FAM124AQ86V42 546 aa24.41■■□□□ 1.5
HOXB3-201ENST00000311626 CLP1Q92989 425 aaKnown RBP24.41■■□□□ 1.5
HOXB3-201ENST00000311626 NEIL2Q969S2 332 aa24.41■■□□□ 1.5
HOXB3-201ENST00000311626 TAMM41Q96BW9 452 aa24.41■■□□□ 1.5
HOXB3-201ENST00000311626 EXO1Q9UQ84 846 aaKnown RBP24.41■■□□□ 1.5
HOXB3-201ENST00000311626 RNF6Q9Y252 685 aa24.41■■□□□ 1.5
HOXB3-201ENST00000311626 MGAT4DA6NG13 374 aa24.41■■□□□ 1.5
HOXB3-201ENST00000311626 MYO1DO94832 1006 aa24.41■■□□□ 1.5
HOXB3-201ENST00000311626 C8AP07357 584 aa24.41■■□□□ 1.5
HOXB3-201ENST00000311626 CD36P16671 472 aa24.41■■□□□ 1.5
HOXB3-201ENST00000311626 IDSP22304 550 aa24.41■■□□□ 1.5
HOXB3-201ENST00000311626 IMPA1P29218 277 aa24.41■■□□□ 1.5
HOXB3-201ENST00000311626 RXRGP48443 463 aa24.41■■□□□ 1.5
HOXB3-201ENST00000311626 ST13P50502 369 aaKnown RBP24.41■■□□□ 1.5
HOXB3-201ENST00000311626 CBX3Q13185 183 aa24.41■■□□□ 1.5
HOXB3-201ENST00000311626 TRIM60Q495X7 471 aa24.41■■□□□ 1.5
HOXB3-201ENST00000311626 ERICH5Q6P6B1 374 aa24.41■■□□□ 1.5
HOXB3-201ENST00000311626 METTL3Q86U44 580 aaKnown RBP24.41■■□□□ 1.5
HOXB3-201ENST00000311626 OR5AK3PQ8NH89 298 aa24.41■■□□□ 1.5
HOXB3-201ENST00000311626 CIDECQ96AQ7 238 aaPredicted RBP24.41■■□□□ 1.5
HOXB3-201ENST00000311626 FEVQ99581 238 aa24.41■■□□□ 1.5
HOXB3-201ENST00000311626 PCDHGA6Q9Y5G7 932 aa24.41■■□□□ 1.5
HOXB3-201ENST00000311626 SLC16A5O15375 505 aa24.4■■□□□ 1.5
HOXB3-201ENST00000311626 SLCO2B1O94956 709 aa24.4■■□□□ 1.5
HOXB3-201ENST00000311626 DGKEP52429 567 aa24.4■■□□□ 1.5
HOXB3-201ENST00000311626 SYT6Q5T7P8 510 aaPredicted RBP24.4■■□□□ 1.5
HOXB3-201ENST00000311626 MSANTD1Q6ZTZ1 278 aa24.4■■□□□ 1.5
HOXB3-201ENST00000311626 PAGE2Q7Z2X7 111 aa24.4■■□□□ 1.5
HOXB3-201ENST00000311626 DDX53Q86TM3 631 aaKnown RBP24.4■■□□□ 1.5
HOXB3-201ENST00000311626 TSPYL5Q86VY4 417 aaPredicted RBP24.4■■□□□ 1.5
HOXB3-201ENST00000311626 TMEM159Q96B96 161 aa24.4■■□□□ 1.5
HOXB3-201ENST00000311626 CAPNS2Q96L46 248 aa24.4■■□□□ 1.5
HOXB3-201ENST00000311626 HMG20AQ9NP66 347 aa24.4■■□□□ 1.5
HOXB3-201ENST00000311626 PALMDQ9NP74 551 aa24.4■■□□□ 1.5
HOXB3-201ENST00000311626 GPATCH2Q9NW75 528 aa24.4■■□□□ 1.5
HOXB3-201ENST00000311626 C1orf226A1L170 272 aa24.4■■□□□ 1.5
HOXB3-201ENST00000311626 C9P02748 559 aa24.4■■□□□ 1.5
HOXB3-201ENST00000311626 GSTM1P09488 218 aa24.4■■□□□ 1.5
HOXB3-201ENST00000311626 TRIM73Q86UV7 250 aa24.4■■□□□ 1.5
HOXB3-201ENST00000311626 NPAS3Q8IXF0 933 aa24.4■■□□□ 1.5
HOXB3-201ENST00000311626 CHST8Q9H2A9 424 aa24.4■■□□□ 1.5
HOXB3-201ENST00000311626 KRBA1A5PL33 1030 aa24.39■■□□□ 1.5
HOXB3-201ENST00000311626 J3KTA2 159 aa24.39■■□□□ 1.5
HOXB3-201ENST00000311626 ADAM23O75077 832 aa24.39■■□□□ 1.5
HOXB3-201ENST00000311626 CTSLP07711 333 aa24.39■■□□□ 1.5
HOXB3-201ENST00000311626 POU2F1P14859 743 aa24.39■■□□□ 1.5
HOXB3-201ENST00000311626 RECQLP46063 649 aaPredicted RBP24.39■■□□□ 1.5
HOXB3-201ENST00000311626 FAHD1Q6P587 224 aa24.39■■□□□ 1.5
HOXB3-201ENST00000311626 ADIPOR2Q86V24 386 aa24.39■■□□□ 1.5
HOXB3-201ENST00000311626 C2orf73Q8N5S3 287 aaPredicted RBP24.39■■□□□ 1.5
HOXB3-201ENST00000311626 DYNC2LI1Q8TCX1 351 aa24.39■■□□□ 1.5
HOXB3-201ENST00000311626 TBC1D20Q96BZ9 403 aa24.39■■□□□ 1.5
HOXB3-201ENST00000311626 BTBD2Q9BX70 525 aa24.39■■□□□ 1.5
HOXB3-201ENST00000311626 SLC6A14Q9UN76 642 aa24.39■■□□□ 1.5
HOXB3-201ENST00000311626 SLC22A1O15245 554 aa24.39■■□□□ 1.49
HOXB3-201ENST00000311626 CTSAP10619 480 aa24.39■■□□□ 1.49
HOXB3-201ENST00000311626 TIMP2P16035 220 aa24.39■■□□□ 1.49
HOXB3-201ENST00000311626 VIPR1P32241 457 aa24.39■■□□□ 1.49
HOXB3-201ENST00000311626 LIPAP38571 399 aa24.39■■□□□ 1.49
HOXB3-201ENST00000311626 NIPAL1Q6NVV3 410 aa24.39■■□□□ 1.49
HOXB3-201ENST00000311626 SLC5A8Q8N695 610 aa24.39■■□□□ 1.49
HOXB3-201ENST00000311626 LGALS12Q96DT0 336 aa24.39■■□□□ 1.49
HOXB3-201ENST00000311626 C11orf24Q96F05 449 aaPredicted RBP24.39■■□□□ 1.49
HOXB3-201ENST00000311626 WRAP53Q9BUR4 548 aaKnown RBP24.39■■□□□ 1.49
HOXB3-201ENST00000311626 TRIM39Q9HCM9 518 aa24.39■■□□□ 1.49
HOXB3-201ENST00000311626 HCFC2Q9Y5Z7 792 aa24.39■■□□□ 1.49
HOXB3-201ENST00000311626 NPIPB8E9PQR5 432 aa24.38■■□□□ 1.49
HOXB3-201ENST00000311626 PSIP1O75475 530 aaKnown RBP24.38■■□□□ 1.49
HOXB3-201ENST00000311626 TGFB1P01137 390 aa24.38■■□□□ 1.49
HOXB3-201ENST00000311626 HLA-EP13747 358 aa24.38■■□□□ 1.49
HOXB3-201ENST00000311626 TYRP14679 529 aa24.38■■□□□ 1.49
HOXB3-201ENST00000311626 PORP16435 677 aaPredicted RBP24.38■■□□□ 1.49
HOXB3-201ENST00000311626 SLC19A1P41440 591 aa24.38■■□□□ 1.49
HOXB3-201ENST00000311626 IDH2P48735 452 aaKnown RBP24.38■■□□□ 1.49
HOXB3-201ENST00000311626 HBA1P69905 142 aa24.38■■□□□ 1.49
HOXB3-201ENST00000311626 TMEM220Q6QAJ8 160 aa24.38■■□□□ 1.49
HOXB3-201ENST00000311626 MFSD4AQ8N468 514 aa24.38■■□□□ 1.49
HOXB3-201ENST00000311626 EMILIN2Q9BXX0 1053 aa24.38■■□□□ 1.49
HOXB3-201ENST00000311626 OR51B5Q9H339 312 aa24.38■■□□□ 1.49
HOXB3-201ENST00000311626 ZBTB20Q9HC78 741 aaPredicted RBP24.38■■□□□ 1.49
HOXB3-201ENST00000311626 C6orf47O95873 294 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms