RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 TUBG1P23258 451 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 RYKP34925 604 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 GBX2P52951 348 aaPredicted RBP7.95□□□□□ -1.14
VPS41-202ENST00000310301 ZNF45Q02386 682 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 HSPB3Q12988 150 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 TUBB3Q13509 450 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 LAPTM5Q13571 262 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 RAB39AQ14964 217 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 ZNF598Q86UK7 904 aaKnown RBP7.95□□□□□ -1.14
VPS41-202ENST00000310301 CASD1Q96PB1 797 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 GPR62Q9BZJ7 368 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 MIOSQ9NXC5 875 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 NOP16Q9Y3C1 178 aaKnown RBP7.95□□□□□ -1.14
VPS41-202ENST00000310301 TCAF1Q9Y4C2 921 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 HCFC2Q9Y5Z7 792 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 SOBPA7XYQ1 873 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 K7EPI3 171 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 MEN1O00255 615 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 LEFTY2O00292 366 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 GCATO75600 419 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 APOC3P02656 99 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 TFPIP10646 304 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 EPCAMP16422 314 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 MATN1P21941 496 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 MMP8P22894 467 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 NKX2-5P52952 324 aaPredicted RBP7.95□□□□□ -1.14
VPS41-202ENST00000310301 TMEM44Q2T9K0 475 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 DGLUCYQ7Z3D6 616 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 KLHL6Q8WZ60 621 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 C5orf34Q96MH7 638 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 USP29Q9HBJ7 922 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 FETUBQ9UGM5 382 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 DLGAP1O14490 977 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 OR2B3O76000 313 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 VNN2O95498 520 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 CXCL10P02778 98 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 VLDLRP98155 873 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 PTP4A2Q12974 167 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 NCEH1Q6PIU2 408 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 TMED4Q7Z7H5 227 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 C17orf64Q86WR6 236 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 SPPL3Q8TCT6 385 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 HSPA12BQ96MM6 686 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 RANBP3Q9H6Z4 567 aaPredicted RBP7.95□□□□□ -1.14
VPS41-202ENST00000310301 ENAMQ9NRM1 1142 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 ZDHHC18Q9NUE0 388 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 COQ3Q9NZJ6 369 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 HSFX1Q9UBD0 423 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 SCML2Q9UQR0 700 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 WNT6Q9Y6F9 365 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 INMT-MINDY4F8WBC2 141 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 ITGA10O75578 1167 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 SNAPC5O75971 98 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 KLF8O95600 359 aaPredicted RBP7.95□□□□□ -1.14
VPS41-202ENST00000310301 PRPS2P11908 318 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 ACVR2AP27037 513 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 TMBIM6P55061 237 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 JAM2P57087 298 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 AP1S1P61966 158 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 MOGSQ13724 837 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 MBLAC2Q68D91 279 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 PAMR1Q6UXH9 720 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 ZNF572Q7Z3I7 529 aaPredicted RBP7.95□□□□□ -1.14
VPS41-202ENST00000310301 RANBP3LQ86VV4 465 aaPredicted RBP7.95□□□□□ -1.14
VPS41-202ENST00000310301 GPR135Q8IZ08 494 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 TOR1AIP2Q8NFQ8 470 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 FAM110BQ8TC76 370 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 TCEAL4Q96EI5 215 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 FAM84AQ96KN4 292 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 ZNF641Q96N77 438 aaPredicted RBP7.95□□□□□ -1.14
VPS41-202ENST00000310301 OR52B2Q96RD2 323 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 AIF1LQ9BQI0 150 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 ARHGAP9Q9BRR9 750 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 B3GNT5Q9BYG0 378 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 SH3PXD2BA1X283 911 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 ZNF705EA8MWA4 302 aaPredicted RBP7.94□□□□□ -1.14
VPS41-202ENST00000310301 LRCH4O75427 683 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 PAGE1O75459 146 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 ELK4P28324 431 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 CASP9P55211 416 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 RPS14P62263 151 aaKnown RBP7.94□□□□□ -1.14
VPS41-202ENST00000310301 PPP1R8Q12972 351 aaKnown RBP7.94□□□□□ -1.14
VPS41-202ENST00000310301 DSC3Q14574 896 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 HID1Q8IV36 788 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 SLC15A3Q8IY34 581 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 LGI4Q8N135 537 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 POGLUT1Q8NBL1 392 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 ZMIZ2Q8NF64 920 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 OR2L8Q8NGY9 312 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 CPXM1Q96SM3 734 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 DPCDQ9BVM2 203 aaPredicted RBP7.94□□□□□ -1.14
VPS41-202ENST00000310301 C14orf119Q9NWQ9 140 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 TNS1Q9HBL0 1735 aaKnown RBP7.94□□□□□ -1.14
VPS41-202ENST00000310301 H0YJX3 145 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 CCL22O00626 93 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 OAZ2O95190 189 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 IFNA21P01568 189 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 SLC35G4P0C7Q5 338 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 NUDT1P36639 197 aa7.94□□□□□ -1.14
VPS41-202ENST00000310301 GDF10P55107 478 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms