RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Zdhhc24Q6IR37 284 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Phf11aQ8BVM9 293 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Tle2Q9WVB2 767 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gm4985A2ALC6 410 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 PiggD3Z3Y1 983 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Ndrg1Q62433 394 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Tmed3Q78IS1 221 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gabbr2Q80T41 940 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Stx16Q8BVI5 326 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Sp110Q8BVK9 445 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Nob1Q8BW10 403 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Zbtb9Q8CDC7 459 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Fam96bQ9D187 163 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Rnase10Q9D5A9 208 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Vps29Q9QZ88 182 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Slit2Q9R1B9 1521 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Adamts14E9PX39 1209 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Serpine3E9Q6A2 401 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gm45837F7D3W5 961 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Vmn2r54K7N649 806 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Rplp0P14869 317 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gria2P23819 883 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 EdnrbP48302 442 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Sh2d1b2Q45HK4 132 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Arl5cQ6P068 179 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Fbxl19Q6PB97 674 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Olfr299Q7TS05 330 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 9130023H24RikQ8BG98 337 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Slc17a6Q8BLE7 582 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Olfr689Q8VG18 320 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Tvp23bQ9D8T4 205 aa11.64□□□□□ -0.55
Trim56-201ENSMUST00000054384 Zfp600A2A7V0 737 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Trnt1Q8K1J6 434 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Apbb3Q8R1C9 486 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Q91W34 466 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 C5P06684 1680 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 4930544D05RikJ3QK56 214 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Cd48P18181 240 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Irf7P70434 457 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Mc1rQ01727 315 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Mapk3Q63844 380 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Zfp446Q8C9M8 523 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Olfr1280Q8VGG8 305 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Adam24Q9R160 761 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 H2-ObO35424 271 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Impa1O55023 277 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Brcc3P46737 291 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Meaf6Q2VPQ9 191 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Olfr1308Q7TQX0 320 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Trmt2bQ8BQJ6 493 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gpr89aQ8BS95 455 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gjd4Q8BSD4 364 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Lrit1Q8K099 624 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Cacnb4Q8R0S4 519 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Atg10Q8R1P4 215 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Olfr164Q8VF87 315 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Smg9Q9DB90 520 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Vmn2r101E9PZS9 857 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Dsg2O55111 1122 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Igfbp5Q07079 271 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Tha1Q6XPS7 400 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Q8BHN7 327 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 B3glctQ8BHT6 489 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Rnf208Q8K0W3 265 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Unc13bQ9Z1N9 1602 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Cd163l1A0A1B0GSB0 991 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 A0A286YDM2 672 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Slc4a11A2AJN7 862 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gm20441G3UYJ7 252 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 EgfP01132 1217 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Tas2r123P59528 333 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Il6stQ00560 917 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Epha1Q60750 977 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Pcp4l1Q6W8Q3 68 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gm5346Q7M766 736 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Asrgl1Q8C0M9 326 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Fbxl3Q8C4V4 428 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Tpgs1Q99MS8 303 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Tbc1d15Q9CXF4 671 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Rnf180Q3U827 592 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Cpxcr1Q3V0P1 322 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Pon3Q62087 354 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Mat1aQ91X83 396 aaKnown RBP11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Tssk4Q9D411 328 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Sec61a2Q9JLR1 476 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Asb4Q9WV71 426 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Olfr1145A2AVC7 325 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Lamp1P11438 406 aaKnown RBP11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Slc25a51Q5HZI9 298 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Etaa1Q5SVT3 877 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Xrcc1Q60596 631 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Nedd4lQ8CFI0 1004 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Slc51aQ8R000 340 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Actl7bQ9QY83 418 aa11.63□□□□□ -0.55
Trim56-201ENSMUST00000054384 Olfr6P34986 316 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 NeproQ8R2U2 564 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Pole4Q9CQ36 118 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Spata19Q9DAQ9 154 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Fbxw5Q9QXW2 573 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Nxpe3B9EKK6 559 aa11.62□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 31.1 ms