RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 TUBA3CQ13748 450 aa8.9□□□□□ -0.98
RBFOX1-223ENST00000620507 SCARB2Q14108 478 aa8.9□□□□□ -0.98
RBFOX1-223ENST00000620507 HEPACAMQ14CZ8 416 aa8.9□□□□□ -0.98
RBFOX1-223ENST00000620507 PERM1Q5SV97 790 aa8.9□□□□□ -0.98
RBFOX1-223ENST00000620507 TMIGD1Q6UXZ0 262 aa8.9□□□□□ -0.98
RBFOX1-223ENST00000620507 VTCN1Q7Z7D3 282 aa8.9□□□□□ -0.98
RBFOX1-223ENST00000620507 EPHX4Q8IUS5 362 aa8.9□□□□□ -0.98
RBFOX1-223ENST00000620507 FRS2Q8WU20 508 aa8.9□□□□□ -0.98
RBFOX1-223ENST00000620507 UBTD2Q8WUN7 234 aa8.9□□□□□ -0.98
RBFOX1-223ENST00000620507 EXOSC8Q96B26 276 aaKnown RBP8.9□□□□□ -0.98
RBFOX1-223ENST00000620507 EID2BQ96D98 161 aa8.9□□□□□ -0.98
RBFOX1-223ENST00000620507 TUBA1CQ9BQE3 449 aa8.9□□□□□ -0.98
RBFOX1-223ENST00000620507 ITM2BQ9Y287 266 aa8.9□□□□□ -0.98
RBFOX1-223ENST00000620507 PRKAB1Q9Y478 270 aa8.9□□□□□ -0.98
RBFOX1-223ENST00000620507 PCDHB11Q9Y5F2 797 aa8.9□□□□□ -0.98
RBFOX1-223ENST00000620507 PDCD11Q14690 1871 aaKnown RBP8.9□□□□□ -0.98
RBFOX1-223ENST00000620507 MIA3Q5JRA6 1907 aa8.9□□□□□ -0.98
RBFOX1-223ENST00000620507 KRT87PA6NCN2 255 aa8.9□□□□□ -0.99
RBFOX1-223ENST00000620507 ALDH4A1P30038 563 aa8.9□□□□□ -0.99
RBFOX1-223ENST00000620507 NTSP30990 170 aa8.9□□□□□ -0.99
RBFOX1-223ENST00000620507 STT3AP46977 705 aa8.9□□□□□ -0.99
RBFOX1-223ENST00000620507 HTRA3P83110 453 aa8.9□□□□□ -0.99
RBFOX1-223ENST00000620507 APOFQ13790 326 aa8.9□□□□□ -0.99
RBFOX1-223ENST00000620507 DHCR24Q15392 516 aa8.9□□□□□ -0.99
RBFOX1-223ENST00000620507 TCEA2Q15560 299 aa8.9□□□□□ -0.99
RBFOX1-223ENST00000620507 ANKRD33Q7Z3H0 272 aa8.9□□□□□ -0.99
RBFOX1-223ENST00000620507 VRK3Q8IV63 474 aa8.9□□□□□ -0.99
RBFOX1-223ENST00000620507 DRAXINQ8NBI3 349 aaPredicted RBP8.9□□□□□ -0.99
RBFOX1-223ENST00000620507 OR7G3Q8NG95 312 aa8.9□□□□□ -0.99
RBFOX1-223ENST00000620507 CNIH3Q8TBE1 160 aa8.9□□□□□ -0.99
RBFOX1-223ENST00000620507 SLC5A11Q8WWX8 675 aa8.9□□□□□ -0.99
RBFOX1-223ENST00000620507 TFGQ92734 400 aaPredicted RBP8.9□□□□□ -0.99
RBFOX1-223ENST00000620507 FAIM2Q9BWQ8 316 aa8.9□□□□□ -0.99
RBFOX1-223ENST00000620507 OSBPL10Q9BXB5 764 aa8.9□□□□□ -0.99
RBFOX1-223ENST00000620507 RERGLQ9H628 205 aa8.9□□□□□ -0.99
RBFOX1-223ENST00000620507 OGDHLQ9ULD0 1010 aa8.9□□□□□ -0.99
RBFOX1-223ENST00000620507 CFAP20Q9Y6A4 193 aaKnown RBP8.9□□□□□ -0.99
RBFOX1-223ENST00000620507 FOXD2O60548 495 aaPredicted RBP8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 SERPINB7O75635 380 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 PDE9AO76083 593 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 TIMP1P01033 207 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 C9P02748 559 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 ALPLP05186 524 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 TIA1P31483 386 aaKnown RBP eCLIP8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 CTSCP53634 463 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 TBPL1P62380 186 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 CD47Q08722 323 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 HSPB3Q12988 150 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 SF1Q15637 639 aaKnown RBP8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 Q6ZNB5 142 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 MTSS1LQ765P7 747 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 AMER2Q8N7J2 671 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 XAGE5Q8WWM1 108 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 HSPBAP1Q96EW2 488 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 ZNF347Q96SE7 839 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 ZNF607Q96SK3 696 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 MYOCQ99972 504 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 NPLQ9BXD5 320 aaPredicted RBP8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 VN1R3Q9BXE9 311 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 REEP4Q9H6H4 257 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 SCHIP1Q9P0W5 487 aaPredicted RBP8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 STOML2Q9UJZ1 356 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 ENTPD4Q9Y227 616 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 TSC22D4Q9Y3Q8 395 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 OR51B4Q9Y5P0 310 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 EDDM13A0A1B0GTR0 161 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 A0A1B0GVG6 124 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 OR1F1O43749 312 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 SLC28A2O43868 658 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 UGDHO60701 494 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 GUCY1B2O75343 617 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 C6orf47O95873 294 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 RB1P06400 928 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 PTX3P26022 381 aaPredicted RBP8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 INPP1P49441 399 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 ALDH6A1Q02252 535 aaKnown RBP8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 TGM3Q08188 693 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 SFSWAPQ12872 951 aaKnown RBP8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 GRIN2CQ14957 1233 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 DEF8Q6ZN54 512 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 MSANTD1Q6ZTZ1 278 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 GPR149Q86SP6 731 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 OR10G2Q8NGC3 310 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 BPIFB1Q8TDL5 484 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 GTPBP3Q969Y2 492 aaKnown RBP8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 TESCQ96BS2 214 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 COPS4Q9BT78 406 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 CLN6Q9NWW5 311 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 SEC14L3Q9UDX4 400 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 KLHL20Q9Y2M5 609 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 TMEM98Q9Y2Y6 226 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 RWDD3Q9Y3V2 267 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 GPSM3Q9Y4H4 160 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 PCDHGA8Q9Y5G5 932 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 TRBV5-4A0A0C4DH59 114 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 TOR1BO14657 336 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 CBFA2T3O75081 653 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 COQ9O75208 318 aa8.89□□□□□ -0.99
RBFOX1-223ENST00000620507 C1GALT1C1LP0DN25 315 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms