RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 KRTAP16-1A8MUX0 517 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 IFRD1O00458 451 aaPredicted RBP3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 CASC3O15234 703 aaKnown RBP3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 SHOX2O60902 331 aaPredicted RBP3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 SORBS2O94875 1100 aaKnown RBP3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 MT-CYBP00156 380 aaPredicted RBP3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 PATE4P0C8F1 98 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 PRKAR1AP10644 381 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 MYOD1P15172 320 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 POU1F1P28069 291 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 EPHA8P29322 1005 aaPredicted RBP3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 CORO1AP31146 461 aaKnown RBP3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 GNL1P36915 607 aaPredicted RBP3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 GPC3P51654 580 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 EFNA5P52803 228 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 DEFA6Q01524 100 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 KDSRQ06136 332 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 BIRC3Q13489 604 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 TAF12Q16514 161 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 C2orf68Q2NKX9 166 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 NADK2Q4G0N4 442 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 KCTD18Q6PI47 426 aaPredicted RBP3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 BBS12Q6ZW61 710 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 ZBTB2Q8N680 514 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 MCUQ8NE86 351 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 WDR36Q8NI36 951 aaKnown RBP3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 ZNF461Q8TAF7 563 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 TBC1D20Q96BZ9 403 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 C19orf60Q96EN9 201 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 C18orf12Q96KH6 178 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 ZSCAN31Q96LW9 406 aaPredicted RBP3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 ZNF583Q96ND8 569 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 ZNF599Q96NL3 588 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 RANBP9Q96S59 729 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 EGFL8Q99944 293 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 FOXC2Q99958 501 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 PYM1Q9BRP8 204 aaKnown RBP3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 LRRCC1Q9C099 1032 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 UBA5Q9GZZ9 404 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 FKRPQ9H9S5 495 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 WSB2Q9NYS7 404 aaPredicted RBP3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 SEPT10Q9P0V9 454 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 DBNLQ9UJU6 430 aaKnown RBP3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 FBXO9Q9UK97 447 aaPredicted RBP3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 FAM96BQ9Y3D0 163 aa3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 LSM4Q9Y4Z0 139 aaKnown RBP3.51□□□□□ -1.85
NSMCE2-211ENST00000523549 I3L4J1 428 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 LRRTM2O43300 516 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 DUX1O43812 170 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 CRLF1O75462 422 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 RTN3O95197 1032 aaPredicted RBP3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 GOLGA8HP0CJ92 632 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 AZU1P20160 251 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 GABRR2P28476 465 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 HALP42357 657 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 CCT5P48643 541 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 PPP2R2BQ00005 443 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 SLC12A1Q13621 1099 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 PDGFRLQ15198 375 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 CEBPEQ15744 281 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 HIST2H2ACQ16777 129 aaPredicted RBP3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 QRICH1Q2TAL8 776 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 ZNF876PQ49A33 203 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 ZNF766Q5HY98 468 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 CCNYL2Q5T2Q4 361 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 PDSS1Q5T2R2 415 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 SFMBT2Q5VUG0 894 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 METTL2BQ6P1Q9 378 aaKnown RBP3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 TMEM81Q6P7N7 255 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 TMED8Q6PL24 325 aaPredicted RBP3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 CPLX2Q6PUV4 134 aaKnown RBP3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 NOTCH2NLQ7Z3S9 236 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 TICAM2Q86XR7 235 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 RBMXL1Q96E39 390 aaKnown RBP3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 METTL2AQ96IZ6 378 aaKnown RBP3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 MAP7D2Q96T17 732 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 SH3GL2Q99962 352 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 MAF1Q9H063 256 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 MCCC2Q9HCC0 563 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 BPIFA1Q9NP55 256 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 BEX4Q9NWD9 120 aaPredicted RBP3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 DUS2Q9NX74 493 aaKnown RBP3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 HSPB7Q9UBY9 170 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 MRPL11Q9Y3B7 192 aaKnown RBP3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 HES2Q9Y543 173 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 PRSS21Q9Y6M0 314 aa3.5□□□□□ -1.85
NSMCE2-211ENST00000523549 SEC16AO15027 2179 aa3.49□□□□□ -1.85
NSMCE2-211ENST00000523549 ANKUB1A6NFN9 424 aa3.49□□□□□ -1.85
NSMCE2-211ENST00000523549 DVL1O14640 695 aa3.49□□□□□ -1.85
NSMCE2-211ENST00000523549 KCNN4O15554 427 aa3.49□□□□□ -1.85
NSMCE2-211ENST00000523549 PHF1O43189 567 aaPredicted RBP3.49□□□□□ -1.85
NSMCE2-211ENST00000523549 DFNA5O60443 496 aa3.49□□□□□ -1.85
NSMCE2-211ENST00000523549 SDC3O75056 442 aa3.49□□□□□ -1.85
NSMCE2-211ENST00000523549 WDR1O75083 606 aa3.49□□□□□ -1.85
NSMCE2-211ENST00000523549 TACC1O75410 805 aa3.49□□□□□ -1.85
NSMCE2-211ENST00000523549 TFP02787 698 aa3.49□□□□□ -1.85
NSMCE2-211ENST00000523549 UBTFL1P0CB47 393 aaPredicted RBP3.49□□□□□ -1.85
NSMCE2-211ENST00000523549 PDHBP11177 359 aa3.49□□□□□ -1.85
NSMCE2-211ENST00000523549 LIFP15018 202 aa3.49□□□□□ -1.85
NSMCE2-211ENST00000523549 HTR1EP28566 365 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms