RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 TSFMP43897 325 aaKnown RBP4.43□□□□□ -1.7
SKP1-208ENST00000521216 CDX1P47902 265 aaPredicted RBP4.43□□□□□ -1.7
SKP1-208ENST00000521216 DCDC1P59894 354 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 IL10RBQ08334 325 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 PTK6Q13882 451 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 BTNL8Q6UX41 500 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 ANKRD33Q7Z3H0 272 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 GLRX5Q86SX6 157 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 OR8H3Q8N146 312 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 GPC2Q8N158 579 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 ZNRF4Q8WWF5 429 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 FAM162AQ96A26 154 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 RBM41Q96IZ5 413 aaKnown RBP4.43□□□□□ -1.7
SKP1-208ENST00000521216 POM121L2Q96KW2 1035 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 C2orf48Q96LS8 159 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 IWS1Q96ST2 819 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 PI4K2AQ9BTU6 479 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 LMAN1LQ9HAT1 526 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 SH3GLB2Q9NR46 395 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 TBC1D13Q9NVG8 400 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 HACD3Q9P035 362 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 PA2G4Q9UQ80 394 aaKnown RBP4.43□□□□□ -1.7
SKP1-208ENST00000521216 CSNK1G3Q9Y6M4 447 aa4.43□□□□□ -1.7
SKP1-208ENST00000521216 MYH14Q7Z406 1995 aaKnown RBP4.42□□□□□ -1.7
SKP1-208ENST00000521216 NDUFAF8A1L188 74 aa4.42□□□□□ -1.7
SKP1-208ENST00000521216 E5RGE8 158 aa4.42□□□□□ -1.7
SKP1-208ENST00000521216 SLU7O95391 586 aaKnown RBP4.42□□□□□ -1.7
SKP1-208ENST00000521216 C9P02748 559 aa4.42□□□□□ -1.7
SKP1-208ENST00000521216 HSP90AB1P08238 724 aaKnown RBP4.42□□□□□ -1.7
SKP1-208ENST00000521216 ANKRD34CP0C6C1 535 aa4.42□□□□□ -1.7
SKP1-208ENST00000521216 SOAT1P35610 550 aa4.42□□□□□ -1.7
SKP1-208ENST00000521216 OR3A2P47893 321 aa4.42□□□□□ -1.7
SKP1-208ENST00000521216 GUCY2DQ02846 1103 aa4.42□□□□□ -1.7
SKP1-208ENST00000521216 BFSP1Q12934 665 aa4.42□□□□□ -1.7
SKP1-208ENST00000521216 MTF1Q14872 753 aa4.42□□□□□ -1.7
SKP1-208ENST00000521216 SPOUT1Q5T280 376 aaKnown RBP4.42□□□□□ -1.7
SKP1-208ENST00000521216 FAM46CQ5VWP2 391 aa4.42□□□□□ -1.7
SKP1-208ENST00000521216 CES4AQ5XG92 561 aa4.42□□□□□ -1.7
SKP1-208ENST00000521216 TXNRD3NBQ6F5E7 133 aa4.42□□□□□ -1.7
SKP1-208ENST00000521216 CCDC60Q8IWA6 550 aaPredicted RBP4.42□□□□□ -1.7
SKP1-208ENST00000521216 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.42□□□□□ -1.7
SKP1-208ENST00000521216 GOT1L1Q8NHS2 421 aaPredicted RBP4.42□□□□□ -1.7
SKP1-208ENST00000521216 NXPE2Q96DL1 559 aa4.42□□□□□ -1.7
SKP1-208ENST00000521216 NEDD4LQ96PU5 975 aa4.42□□□□□ -1.7
SKP1-208ENST00000521216 ADPGKQ9BRR6 497 aa4.42□□□□□ -1.7
SKP1-208ENST00000521216 SYT11Q9BT88 431 aa4.42□□□□□ -1.7
SKP1-208ENST00000521216 ZWILCHQ9H900 591 aa4.42□□□□□ -1.7
SKP1-208ENST00000521216 TMOD3Q9NYL9 352 aa4.42□□□□□ -1.7
SKP1-208ENST00000521216 IL36AQ9UHA7 158 aa4.42□□□□□ -1.7
SKP1-208ENST00000521216 GTF3C4Q9UKN8 822 aa4.42□□□□□ -1.7
SKP1-208ENST00000521216 ELF5Q9UKW6 265 aaPredicted RBP4.42□□□□□ -1.7
SKP1-208ENST00000521216 ITGA11Q9UKX5 1188 aa4.42□□□□□ -1.7
SKP1-208ENST00000521216 NSG2Q9Y328 171 aa4.42□□□□□ -1.7
SKP1-208ENST00000521216 TRAV18A0A075B6X5 111 aa4.41□□□□□ -1.7
SKP1-208ENST00000521216 C5orf52A6NGY3 159 aa4.41□□□□□ -1.7
SKP1-208ENST00000521216 H3BMM5 538 aa4.41□□□□□ -1.7
SKP1-208ENST00000521216 SELENOFO60613 162 aa4.41□□□□□ -1.7
SKP1-208ENST00000521216 CYTIPO60759 359 aa4.41□□□□□ -1.7
SKP1-208ENST00000521216 KRT33AO76009 404 aa4.41□□□□□ -1.7
SKP1-208ENST00000521216 MOCS2O96007 188 aaPredicted RBP4.41□□□□□ -1.7
SKP1-208ENST00000521216 SP9P0CG40 484 aa4.41□□□□□ -1.7
SKP1-208ENST00000521216 EEF2P13639 858 aaKnown RBP4.41□□□□□ -1.7
SKP1-208ENST00000521216 GLULP15104 373 aa4.41□□□□□ -1.7
SKP1-208ENST00000521216 DPEP1P16444 411 aa4.41□□□□□ -1.7
SKP1-208ENST00000521216 AADACP22760 399 aa4.41□□□□□ -1.7
SKP1-208ENST00000521216 HLA-FP30511 346 aa4.41□□□□□ -1.7
SKP1-208ENST00000521216 NECTIN1Q15223 517 aa4.41□□□□□ -1.7
SKP1-208ENST00000521216 ZNF542PQ5EBM4 170 aa4.41□□□□□ -1.7
SKP1-208ENST00000521216 CASC4Q6P4E1 433 aa4.41□□□□□ -1.7
SKP1-208ENST00000521216 CPEB2Q7Z5Q1 589 aaKnown RBP4.41□□□□□ -1.7
SKP1-208ENST00000521216 C4orf19Q8IY42 314 aa4.41□□□□□ -1.7
SKP1-208ENST00000521216 NCOA7Q8NI08 942 aa4.41□□□□□ -1.7
SKP1-208ENST00000521216 SLCO2A1Q92959 643 aa4.41□□□□□ -1.7
SKP1-208ENST00000521216 ZNF599Q96NL3 588 aa4.41□□□□□ -1.7
SKP1-208ENST00000521216 KRT12Q99456 494 aa4.41□□□□□ -1.7
SKP1-208ENST00000521216 MCRIP2Q9BUT9 160 aaKnown RBP4.41□□□□□ -1.7
SKP1-208ENST00000521216 TDRD1Q9BXT4 1180 aaKnown RBP4.41□□□□□ -1.7
SKP1-208ENST00000521216 UPF3AQ9H1J1 476 aaKnown RBP4.41□□□□□ -1.7
SKP1-208ENST00000521216 PDRG1Q9NUG6 133 aa4.41□□□□□ -1.7
SKP1-208ENST00000521216 ARMCX3Q9UH62 379 aaPredicted RBP4.41□□□□□ -1.7
SKP1-208ENST00000521216 POMT2Q9UKY4 750 aa4.41□□□□□ -1.7
SKP1-208ENST00000521216 NCKAP1Q9Y2A7 1128 aa4.41□□□□□ -1.7
SKP1-208ENST00000521216 MTMR11A4FU01 709 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 A8MVM7 634 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 RTCAO00442 366 aaKnown RBP4.4□□□□□ -1.71
SKP1-208ENST00000521216 YES1P07947 543 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 ZSCAN5DPP0CG00 497 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 KCNJ1P48048 391 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 LUMP51884 338 aaPredicted RBP4.4□□□□□ -1.71
SKP1-208ENST00000521216 CLDN17P56750 224 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 FOLH1Q04609 750 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 TAB1Q15750 504 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 CDO1Q16878 200 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 TWISTNBQ3B726 338 aaPredicted RBP4.4□□□□□ -1.71
SKP1-208ENST00000521216 KRTAP27-1Q3LI81 207 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 FASTKD1Q53R41 847 aaKnown RBP4.4□□□□□ -1.71
SKP1-208ENST00000521216 NOTUMQ6P988 496 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 TRIM65Q6PJ69 517 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 PRUNE1Q86TP1 453 aa4.4□□□□□ -1.71
SKP1-208ENST00000521216 PRSS35Q8N3Z0 413 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms