RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 GRIK5Q16478 980 aa4.66□□□□□ -1.66
NEAT1-202ENST00000501122 IQCJQ1A5X6 159 aa4.66□□□□□ -1.66
NEAT1-202ENST00000501122 FAM156AQ8NDB6 213 aa4.66□□□□□ -1.66
NEAT1-202ENST00000501122 QRFPRQ96P65 431 aa4.66□□□□□ -1.66
NEAT1-202ENST00000501122 FBXL3Q9UKT7 428 aa4.66□□□□□ -1.66
NEAT1-202ENST00000501122 PCDHB7Q9Y5E2 793 aa4.66□□□□□ -1.66
NEAT1-202ENST00000501122 RAD17O75943 681 aa4.66□□□□□ -1.66
NEAT1-202ENST00000501122 IL1R2P27930 398 aa4.66□□□□□ -1.66
NEAT1-202ENST00000501122 SLC39A12Q504Y0 691 aa4.66□□□□□ -1.66
NEAT1-202ENST00000501122 PINK1Q9BXM7 581 aa4.66□□□□□ -1.66
NEAT1-202ENST00000501122 SMURF2Q9HAU4 748 aa4.66□□□□□ -1.66
NEAT1-202ENST00000501122 LRRC4CQ9HCJ2 640 aa4.66□□□□□ -1.66
NEAT1-202ENST00000501122 NCF1P14598 390 aaPredicted RBP4.65□□□□□ -1.66
NEAT1-202ENST00000501122 RPL22P35268 128 aaKnown RBP4.65□□□□□ -1.66
NEAT1-202ENST00000501122 CCR6P51684 374 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 SF3A2Q15428 464 aaKnown RBP4.65□□□□□ -1.66
NEAT1-202ENST00000501122 RNASE10Q5GAN6 216 aaKnown RBP4.65□□□□□ -1.66
NEAT1-202ENST00000501122 OR10A6Q8NH74 314 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 KREMEN1Q96MU8 473 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 A6NCN8 305 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 ADAM11O75078 769 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 GADD45GO95257 159 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 CSHL1Q14406 222 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 YIPF5Q969M3 257 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 MECRQ9BV79 373 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 FRMPD2Q68DX3 1309 aaPredicted RBP4.65□□□□□ -1.66
NEAT1-202ENST00000501122 RPLP1P05386 114 aaKnown RBP4.65□□□□□ -1.66
NEAT1-202ENST00000501122 PTBP1P26599 531 aaKnown RBP eCLIP4.65□□□□□ -1.663e-48■■□□□ 13
NEAT1-202ENST00000501122 MAP1SQ66K74 1059 aaPredicted RBP4.65□□□□□ -1.66
NEAT1-202ENST00000501122 PLPP6Q8IY26 295 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 SLC22A17Q8WUG5 538 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 HPSEQ9Y251 543 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 A0A0D9SG52 128 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 ZNF587BE7ETH6 402 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 TNFRSF11BO00300 401 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 AKR7A2O43488 359 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 FAM189A1O60320 539 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 PGCP20142 388 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 RGS8P57771 180 aaPredicted RBP4.65□□□□□ -1.66
NEAT1-202ENST00000501122 TMED4Q7Z7H5 227 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 ELF4Q99607 663 aaPredicted RBP4.65□□□□□ -1.66
NEAT1-202ENST00000501122 MACROD1Q9BQ69 325 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.65□□□□□ -1.664e-61■□□□□ 8.7
NEAT1-202ENST00000501122 SALL4Q9UJQ4 1053 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 ABCB11O95342 1321 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 EIF1AYO14602 144 aaKnown RBP4.65□□□□□ -1.66
NEAT1-202ENST00000501122 EIF1AXP47813 144 aaKnown RBP4.65□□□□□ -1.66
NEAT1-202ENST00000501122 CCNJQ5T5M9 372 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 PXKQ7Z7A4 578 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 PARP16Q8N5Y8 322 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 KLHDC1Q8N7A1 406 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 CRAMP1Q96RY5 1269 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 VRTNQ9H8Y1 702 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 SMURF1Q9HCE7 757 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 MYH11P35749 1972 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 PCDH17O14917 1159 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 HNRNPDLO14979 420 aaKnown RBP4.65□□□□□ -1.66
NEAT1-202ENST00000501122 ENPP1P22413 925 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 RBP2P50120 134 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 RAB28P51157 221 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 CEBPEQ15744 281 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 C3orf38Q5JPI3 329 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 SPATC1Q76KD6 591 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 DPP9Q86TI2 863 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 CARFQ8N187 725 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 SUN3Q8TAQ9 357 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 KIF25Q9UIL4 384 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 HACL1Q9UJ83 578 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 PCDHGB5Q9Y5G0 923 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 DIRAS3O95661 229 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 HIST1H2AGP0C0S8 130 aaPredicted RBP4.65□□□□□ -1.66
NEAT1-202ENST00000501122 T-ENOLP0DO92 83 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 HIST1H2ADP20671 130 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 SNCAP37840 140 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 RAP2BP61225 183 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 BEX3Q00994 111 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 PCBP1Q15365 356 aaKnown RBP eCLIP4.65□□□□□ -1.663e-47■□□□□ 9.9
NEAT1-202ENST00000501122 ZBTB33Q86T24 672 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 ZNF546Q86UE3 836 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 NLRX1Q86UT6 975 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 B3GALNT2Q8NCR0 500 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 HIST1H2AHQ96KK5 128 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 MUS81Q96NY9 551 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 HIST1H2AJQ99878 128 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 H2AFJQ9BTM1 129 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 ACSS3Q9H6R3 686 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 JPH1Q9HDC5 661 aaPredicted RBP4.65□□□□□ -1.66
NEAT1-202ENST00000501122 ANKRD50Q9ULJ7 1429 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 TMEM218A2RU14 115 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 LRIT2A6NDA9 550 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 MATN3O15232 486 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 KIAA0513O60268 411 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 RPP40O75818 363 aaKnown RBP4.65□□□□□ -1.66
NEAT1-202ENST00000501122 PROSCO94903 275 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 NME1P15531 152 aaKnown RBP4.65□□□□□ -1.66
NEAT1-202ENST00000501122 DSG3P32926 999 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 COL5A1-AS1Q5SY13 56 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 PYROXD2Q8N2H3 581 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 TMEM143Q96AN5 459 aa4.65□□□□□ -1.66
NEAT1-202ENST00000501122 MOAP1Q96BY2 351 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms