RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 PDE7AQ13946 482 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 TOR1AIP1Q5JTV8 583 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 AGAP6Q5VW22 663 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 KLHL10Q6JEL2 608 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 TTC27Q6P3X3 843 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 FUT10Q6P4F1 479 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 CTR9Q6PD62 1173 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 GDPD4Q6W3E5 623 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 SIGLEC15Q6ZMC9 328 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 FOXL2NBQ6ZUU3 175 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 C9orf139Q6ZV77 190 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 TOM1L2Q6ZVM7 507 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 C1orf186Q6ZWK4 172 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 CROCCP3Q8IVE0 287 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 DNAJC22Q8N4W6 341 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 TEX9Q8N6V9 391 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 MRPL43Q8N983 215 aaKnown RBP3.92□□□□□ -1.78
XRN1-213ENST00000489241 OR52E1Q8NGJ3 308 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 OR13A1Q8NGR1 328 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 OR52N5Q8NH56 324 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 KIAA1524Q8TCG1 905 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 ZNF560Q96MR9 790 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 EPYCQ99645 322 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 IDI2Q9BXS1 227 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 PANK2Q9BZ23 570 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 SLC39A8Q9C0K1 460 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 SDCBP2Q9H190 292 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 HSD3B7Q9H2F3 369 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 ZNF556Q9HAH1 456 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 MAGEF1Q9HAY2 307 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 ZBTB20Q9HC78 741 aaPredicted RBP3.92□□□□□ -1.78
XRN1-213ENST00000489241 SYTL2Q9HCH5 934 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 FAM207AQ9NSI2 230 aaPredicted RBP3.92□□□□□ -1.78
XRN1-213ENST00000489241 PIN4Q9Y237 131 aaKnown RBP3.92□□□□□ -1.78
XRN1-213ENST00000489241 EXOC6BQ9Y2D4 811 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 STRAPQ9Y3F4 350 aaKnown RBP3.92□□□□□ -1.78
XRN1-213ENST00000489241 PFASO15067 1338 aa3.92□□□□□ -1.78
XRN1-213ENST00000489241 TRAV18A0A075B6X5 111 aa3.91□□□□□ -1.78
XRN1-213ENST00000489241 CXCL14O95715 111 aa3.91□□□□□ -1.78
XRN1-213ENST00000489241 IGHV4-31P0DP07 118 aa3.91□□□□□ -1.78
XRN1-213ENST00000489241 GP1BBP13224 206 aa3.91□□□□□ -1.78
XRN1-213ENST00000489241 CD59P13987 128 aa3.91□□□□□ -1.78
XRN1-213ENST00000489241 EFNA1P20827 205 aaPredicted RBP3.91□□□□□ -1.78
XRN1-213ENST00000489241 CSTF2P33240 577 aaKnown RBP eCLIP3.91□□□□□ -1.78
XRN1-213ENST00000489241 ATXN3P54252 364 aaPredicted RBP3.91□□□□□ -1.78
XRN1-213ENST00000489241 DVL1P1P54792 670 aaPredicted RBP3.91□□□□□ -1.78
XRN1-213ENST00000489241 MAZP56270 477 aaKnown RBP3.91□□□□□ -1.78
XRN1-213ENST00000489241 GCNT1Q02742 428 aa3.91□□□□□ -1.78
XRN1-213ENST00000489241 TRAP1Q12931 704 aaKnown RBP3.91□□□□□ -1.78
XRN1-213ENST00000489241 HERC3Q15034 1050 aa3.91□□□□□ -1.78
XRN1-213ENST00000489241 STXBP2Q15833 593 aa3.91□□□□□ -1.78
XRN1-213ENST00000489241 ZNF718Q3SXZ3 478 aa3.91□□□□□ -1.78
XRN1-213ENST00000489241 MIER3Q7Z3K6 550 aa3.91□□□□□ -1.78
XRN1-213ENST00000489241 TMEM126BQ8IUX1 230 aa3.91□□□□□ -1.78
XRN1-213ENST00000489241 TDHQ8IZJ6 230 aa3.91□□□□□ -1.78
XRN1-213ENST00000489241 KLHDC1Q8N7A1 406 aa3.91□□□□□ -1.78
XRN1-213ENST00000489241 DMBX1Q8NFW5 382 aa3.91□□□□□ -1.78
XRN1-213ENST00000489241 PRCCQ92733 491 aaPredicted RBP3.91□□□□□ -1.78
XRN1-213ENST00000489241 DTD2Q96FN9 168 aa3.91□□□□□ -1.78
XRN1-213ENST00000489241 LMLNQ96KR4 655 aa3.91□□□□□ -1.78
XRN1-213ENST00000489241 C10orf88Q9H8K7 445 aa3.91□□□□□ -1.78
XRN1-213ENST00000489241 FGF21Q9NSA1 209 aa3.91□□□□□ -1.78
XRN1-213ENST00000489241 PDRG1Q9NUG6 133 aa3.91□□□□□ -1.78
XRN1-213ENST00000489241 HPF1Q9NWY4 346 aa3.91□□□□□ -1.78
XRN1-213ENST00000489241 HOOK1Q9UJC3 728 aaKnown RBP3.91□□□□□ -1.78
XRN1-213ENST00000489241 ZNF510Q9Y2H8 683 aa3.91□□□□□ -1.78
XRN1-213ENST00000489241 RIPK3Q9Y572 518 aa3.91□□□□□ -1.78
XRN1-213ENST00000489241 TRBV2A0A0J9YWF9 115 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 C2orf92A0A1B0GVN3 265 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 MAGEB16A2A368 324 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 IFITM10A6NMD0 228 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 C2CD4DB7Z1M9 353 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 TLR4O00206 839 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 O00370 1275 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 CRYAAP02489 173 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 FGF5P12034 268 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 CCNA2P20248 432 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 ELAVL4P26378 380 aaKnown RBP3.9□□□□□ -1.79
XRN1-213ENST00000489241 NR2C2P49116 596 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 EVCP57679 992 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 SLC34A1Q06495 639 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 CETN1Q12798 172 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 ABRQ12979 859 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 ZRSR1Q15695 479 aaKnown RBP3.9□□□□□ -1.79
XRN1-213ENST00000489241 GPR33Q49SQ1 333 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 SLC35D3Q5M8T2 416 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 C9orf50Q5SZB4 431 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 CCNYL2Q5T2Q4 361 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 ZCCHC12Q6PEW1 402 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 USP43Q70EL4 1123 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 LAX1Q8IWV1 398 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 CNNM3Q8NE01 707 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 TAF4BQ92750 862 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 SCRN2Q96FV2 425 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 CFAP36Q96G28 342 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 RBM41Q96IZ5 413 aaKnown RBP3.9□□□□□ -1.79
XRN1-213ENST00000489241 NAP1L3Q99457 506 aaPredicted RBP3.9□□□□□ -1.79
XRN1-213ENST00000489241 PRMT1Q99873 361 aaKnown RBP3.9□□□□□ -1.79
XRN1-213ENST00000489241 PKP2Q99959 881 aa3.9□□□□□ -1.79
XRN1-213ENST00000489241 ALKBH7Q9BT30 221 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms